Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03009 and MPMX19_03010 are separated by 421 nucleotides MPMX19_03010 and MPMX19_03011 are separated by 100 nucleotides MPMX19_03011 and MPMX19_03012 overlap by 61 nucleotides
MPMX19_03009: MPMX19_03009 - Erythritol catabolism regulatory protein EryD, at 272,388 to 273,374
_03009
MPMX19_03010: MPMX19_03010 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 273,796 to 274,458
_03010
MPMX19_03011: MPMX19_03011 - hypothetical protein, at 274,559 to 275,140
_03011
MPMX19_03012: MPMX19_03012 - hypothetical protein, at 275,080 to 275,538
_03012
Position (kb) 273
274
275 Strain fitness (log2 ratio) -2
-1
0
1 at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.494 kb on + strand at 273.495 kb on - strand at 273.495 kb on - strand at 273.495 kb on - strand at 273.495 kb on - strand at 273.495 kb on - strand at 273.495 kb on - strand at 273.495 kb on - strand at 273.637 kb on + strand at 273.637 kb on + strand at 273.637 kb on + strand at 273.638 kb on - strand at 273.638 kb on - strand at 273.638 kb on - strand at 273.808 kb on + strand at 273.808 kb on + strand at 273.808 kb on + strand at 273.808 kb on + strand at 273.808 kb on + strand at 273.808 kb on + strand at 273.809 kb on - strand at 274.269 kb on + strand, within MPMX19_03010 at 274.270 kb on - strand, within MPMX19_03010 at 274.561 kb on - strand at 274.668 kb on + strand, within MPMX19_03011 at 274.669 kb on - strand, within MPMX19_03011 at 274.848 kb on + strand, within MPMX19_03011 at 274.848 kb on + strand, within MPMX19_03011 at 274.848 kb on + strand, within MPMX19_03011 at 274.849 kb on - strand, within MPMX19_03011 at 274.849 kb on - strand, within MPMX19_03011 at 274.849 kb on - strand, within MPMX19_03011 at 274.849 kb on - strand, within MPMX19_03011 at 274.924 kb on - strand, within MPMX19_03011 at 274.924 kb on - strand, within MPMX19_03011 at 274.924 kb on - strand, within MPMX19_03011 at 274.971 kb on + strand, within MPMX19_03011
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 273,494 + +0.2 273,494 + +0.7 273,494 + -0.4 273,494 + -0.1 273,494 + -1.0 273,494 + -0.1 273,494 + -0.3 273,494 + -0.7 273,494 + +0.2 273,494 + +0.5 273,494 + -0.7 273,494 + -0.4 273,495 - -1.5 273,495 - -1.7 273,495 - -0.8 273,495 - -0.8 273,495 - +0.0 273,495 - -0.1 273,495 - -0.7 273,637 + -1.3 273,637 + -0.2 273,637 + -0.5 273,638 - +0.2 273,638 - -1.1 273,638 - +0.4 273,808 + +0.0 273,808 + -1.0 273,808 + -1.4 273,808 + -0.5 273,808 + -0.1 273,808 + -1.5 273,809 - +0.9 274,269 + MPMX19_03010 0.71 -0.7 274,270 - MPMX19_03010 0.71 -0.4 274,561 - -2.0 274,668 + MPMX19_03011 0.19 -1.2 274,669 - MPMX19_03011 0.19 -0.5 274,848 + MPMX19_03011 0.50 +0.0 274,848 + MPMX19_03011 0.50 -0.0 274,848 + MPMX19_03011 0.50 -1.1 274,849 - MPMX19_03011 0.50 +0.8 274,849 - MPMX19_03011 0.50 -0.1 274,849 - MPMX19_03011 0.50 -1.1 274,849 - MPMX19_03011 0.50 -2.1 274,924 - MPMX19_03011 0.63 +0.2 274,924 - MPMX19_03011 0.63 +1.0 274,924 - MPMX19_03011 0.63 -1.1 274,971 + MPMX19_03011 0.71 -1.3
Or see this region's nucleotide sequence