Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02788

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
19,954	+		MPMX19_02787	0.31	-2.3
19,954	+		MPMX19_02787	0.31	+0.2
19,955	-		MPMX19_02787	0.31	-1.2
19,955	-		MPMX19_02787	0.31	+0.7
19,955	-		MPMX19_02787	0.31	-0.8
19,955	-		MPMX19_02787	0.31	-0.5
19,955	-		MPMX19_02787	0.31	-0.5
19,955	-		MPMX19_02787	0.31	-0.4
19,955	-		MPMX19_02787	0.31	-0.5
20,536	+		MPMX19_02787	0.80	-0.3
20,536	+		MPMX19_02787	0.80	+0.9
20,536	+		MPMX19_02787	0.80	-1.6
20,536	+		MPMX19_02787	0.80	-0.8
20,741	-				-1.4
20,741	-				-0.2
20,847	+				+0.9
20,847	+				-0.5
20,847	+				+0.6
20,847	+				-1.0
20,847	+				-0.5
20,847	+				-0.4
20,847	+				+0.7
20,847	+				+0.1
20,847	+				+0.1
20,847	+				-0.8
20,847	+				-0.5
20,847	+				+1.1
20,848	-				-0.1
20,848	-				-0.2
20,848	-				-0.5
20,848	-				-0.7
20,848	-				-0.3
20,988	+		MPMX19_02788	0.26	-1.6
20,988	+		MPMX19_02788	0.26	-1.3
21,084	+		MPMX19_02788	0.38	-1.7
21,084	+		MPMX19_02788	0.38	-0.5
21,085	-		MPMX19_02788	0.38	-2.0
21,085	-		MPMX19_02788	0.38	-0.8
21,085	-		MPMX19_02788	0.38	-1.0
21,085	-		MPMX19_02788	0.38	-0.3
21,085	-		MPMX19_02788	0.38	+0.8
21,085	-		MPMX19_02788	0.38	-1.3
21,085	-		MPMX19_02788	0.38	-0.6
21,085	-		MPMX19_02788	0.38	-0.1
21,085	-		MPMX19_02788	0.38	+0.1
21,085	-		MPMX19_02788	0.38	+0.7
21,215	-		MPMX19_02788	0.55	+0.1
21,697	-				+0.0
21,709	-				+0.2
21,940	+		MPMX19_02789	0.33	+0.0
21,940	+		MPMX19_02789	0.33	-0.5
21,940	+		MPMX19_02789	0.33	-0.3
21,940	+		MPMX19_02789	0.33	-0.1
21,940	+		MPMX19_02789	0.33	-0.2
21,940	+		MPMX19_02789	0.33	-0.5
21,940	+		MPMX19_02789	0.33	+0.5
21,940	+		MPMX19_02789	0.33	+0.2
21,940	+		MPMX19_02789	0.33	-0.2
21,941	-		MPMX19_02789	0.33	+1.1
21,941	-		MPMX19_02789	0.33	+0.2
21,941	-		MPMX19_02789	0.33	-0.3
21,946	+		MPMX19_02789	0.34	-1.3
21,946	+		MPMX19_02789	0.34	-1.3
21,947	-		MPMX19_02789	0.34	-1.5
21,947	-		MPMX19_02789	0.34	-1.3
22,126	+		MPMX19_02789	0.60	-1.9
22,126	+		MPMX19_02789	0.60	-0.1
22,126	+		MPMX19_02789	0.60	+0.5
22,126	+		MPMX19_02789	0.60	+0.5
22,126	-		MPMX19_02789	0.60	-0.3
22,127	-		MPMX19_02789	0.60	+0.6
22,127	-		MPMX19_02789	0.60	+1.2
22,127	-		MPMX19_02789	0.60	+0.1
22,127	-		MPMX19_02789	0.60	+0.2
22,128	+		MPMX19_02789	0.60	+0.1
22,128	+		MPMX19_02789	0.60	+0.4
22,128	+		MPMX19_02789	0.60	-0.7
22,128	+		MPMX19_02789	0.60	-1.5
22,128	+		MPMX19_02789	0.60	-0.2
22,128	+		MPMX19_02789	0.60	-0.1
22,128	+		MPMX19_02789	0.60	-0.9
22,128	+		MPMX19_02789	0.60	-0.8
22,128	+		MPMX19_02789	0.60	+0.2
22,128	+		MPMX19_02789	0.60	+1.7
22,128	+		MPMX19_02789	0.60	-0.5
22,128	+		MPMX19_02789	0.60	+0.6
22,128	+		MPMX19_02789	0.60	-0.3
22,129	-		MPMX19_02789	0.60	-0.9
22,129	-		MPMX19_02789	0.60	-0.9
22,129	-		MPMX19_02789	0.60	+0.5
22,129	-		MPMX19_02789	0.60	-0.3
22,129	-		MPMX19_02789	0.60	-0.1
22,129	-		MPMX19_02789	0.60	-0.8
22,129	-		MPMX19_02789	0.60	-0.5
22,129	-		MPMX19_02789	0.60	+0.6
22,300	+		MPMX19_02789	0.85	-1.4
22,300	+		MPMX19_02789	0.85	-0.3
22,300	+		MPMX19_02789	0.85	-0.5
22,301	-		MPMX19_02789	0.85	-1.4
22,301	-		MPMX19_02789	0.85	+0.4
22,301	-		MPMX19_02789	0.85	+0.1
22,301	-		MPMX19_02789	0.85	-1.0
22,301	-		MPMX19_02789	0.85	+0.6
22,301	-		MPMX19_02789	0.85	-0.4
22,348	+				-2.8
22,348	+				+1.1
22,348	+				-0.8
22,349	-				-0.8
22,349	-				-0.6
22,349	-				-0.9
22,486	+				+0.1
22,504	+				+1.1
22,504	+				-1.4