Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02768 and MPMX19_02769 overlap by 4 nucleotides MPMX19_02769 and MPMX19_02770 are separated by 19 nucleotides
MPMX19_02768: MPMX19_02768 - Ribose operon repressor, at 40 to 1,014
_02768
MPMX19_02769: MPMX19_02769 - Ribokinase, at 1,011 to 1,937
_02769
MPMX19_02770: MPMX19_02770 - C4-dicarboxylic acid transporter DauA, at 1,957 to 3,696
_02770
Position (kb) 0
1
2 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 0.130 kb on + strand at 0.131 kb on - strand at 0.131 kb on - strand at 0.131 kb on - strand at 0.265 kb on + strand, within MPMX19_02768 at 0.266 kb on - strand, within MPMX19_02768 at 0.673 kb on + strand, within MPMX19_02768 at 0.838 kb on + strand, within MPMX19_02768 at 0.839 kb on - strand, within MPMX19_02768 at 0.839 kb on - strand, within MPMX19_02768 at 0.839 kb on - strand, within MPMX19_02768 at 0.839 kb on - strand, within MPMX19_02768 at 0.839 kb on - strand, within MPMX19_02768 at 1.028 kb on + strand at 1.029 kb on - strand at 1.029 kb on - strand at 1.068 kb on + strand at 1.068 kb on + strand at 1.117 kb on - strand, within MPMX19_02769 at 1.704 kb on + strand, within MPMX19_02769 at 1.704 kb on + strand, within MPMX19_02769 at 1.704 kb on + strand, within MPMX19_02769 at 1.704 kb on + strand, within MPMX19_02769 at 1.704 kb on + strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.705 kb on - strand, within MPMX19_02769 at 1.958 kb on + strand at 1.959 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 130 + +0.2 131 - +0.1 131 - -1.5 131 - -0.9 265 + MPMX19_02768 0.23 +0.6 266 - MPMX19_02768 0.23 -1.2 673 + MPMX19_02768 0.65 +1.2 838 + MPMX19_02768 0.82 -1.1 839 - MPMX19_02768 0.82 -0.1 839 - MPMX19_02768 0.82 -2.5 839 - MPMX19_02768 0.82 -1.2 839 - MPMX19_02768 0.82 -1.1 839 - MPMX19_02768 0.82 -1.4 1,028 + -0.5 1,029 - +3.6 1,029 - +0.1 1,068 + +0.3 1,068 + -0.4 1,117 - MPMX19_02769 0.11 -0.9 1,704 + MPMX19_02769 0.75 -1.2 1,704 + MPMX19_02769 0.75 +0.2 1,704 + MPMX19_02769 0.75 +0.7 1,704 + MPMX19_02769 0.75 -1.8 1,704 + MPMX19_02769 0.75 -0.6 1,705 - MPMX19_02769 0.75 -1.3 1,705 - MPMX19_02769 0.75 -0.5 1,705 - MPMX19_02769 0.75 -0.5 1,705 - MPMX19_02769 0.75 +2.1 1,705 - MPMX19_02769 0.75 -0.1 1,705 - MPMX19_02769 0.75 -1.4 1,705 - MPMX19_02769 0.75 +0.7 1,705 - MPMX19_02769 0.75 -0.9 1,958 + -0.6 1,959 - -2.5
Or see this region's nucleotide sequence