Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02752

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,895,198	+		MPMX19_02750	0.26	-0.5
2,895,198	+		MPMX19_02750	0.26	-0.5
2,895,198	+		MPMX19_02750	0.26	-1.6
2,895,199	-		MPMX19_02750	0.26	-1.9
2,895,294	+		MPMX19_02750	0.34	+0.4
2,895,295	-		MPMX19_02750	0.35	-1.3
2,895,295	-		MPMX19_02750	0.35	+1.2
2,895,295	-		MPMX19_02750	0.35	+0.9
2,895,295	-		MPMX19_02750	0.35	+0.5
2,895,295	-		MPMX19_02750	0.35	+0.1
2,895,295	-		MPMX19_02750	0.35	-0.6
2,895,300	+		MPMX19_02750	0.35	-1.6
2,895,300	+		MPMX19_02750	0.35	+0.8
2,895,301	-		MPMX19_02750	0.35	+0.4
2,895,301	-		MPMX19_02750	0.35	-0.8
2,895,301	-		MPMX19_02750	0.35	-1.3
2,895,301	-		MPMX19_02750	0.35	-0.5
2,895,301	-		MPMX19_02750	0.35	-1.3
2,895,433	+		MPMX19_02750	0.47	+0.2
2,895,433	+		MPMX19_02750	0.47	-0.1
2,895,434	-		MPMX19_02750	0.47	-0.6
2,895,434	-		MPMX19_02750	0.47	+0.9
2,895,561	+		MPMX19_02750	0.59	+0.3
2,895,561	+		MPMX19_02750	0.59	-1.7
2,895,561	+		MPMX19_02750	0.59	-0.7
2,895,561	+		MPMX19_02750	0.59	-0.8
2,895,561	+		MPMX19_02750	0.59	+0.5
2,895,561	+		MPMX19_02750	0.59	-1.2
2,895,561	+		MPMX19_02750	0.59	+1.0
2,895,561	+		MPMX19_02750	0.59	+0.6
2,895,561	+		MPMX19_02750	0.59	+0.7
2,895,562	-		MPMX19_02750	0.59	-0.3
2,895,562	-		MPMX19_02750	0.59	-0.1
2,895,562	-		MPMX19_02750	0.59	-0.2
2,895,562	-		MPMX19_02750	0.59	-3.0
2,895,562	-		MPMX19_02750	0.59	-0.2
2,895,562	-		MPMX19_02750	0.59	-1.8
2,895,562	-		MPMX19_02750	0.59	+1.0
2,895,574	+		MPMX19_02750	0.60	+0.2
2,895,575	-		MPMX19_02750	0.60	-1.7
2,895,575	-		MPMX19_02750	0.60	+1.2
2,895,638	+		MPMX19_02750	0.66	+1.7
2,895,639	-		MPMX19_02750	0.66	+1.0
2,895,795	+		MPMX19_02750	0.80	-0.8
2,895,795	+		MPMX19_02750	0.80	+0.8
2,895,795	+		MPMX19_02750	0.80	-0.7
2,895,795	+		MPMX19_02750	0.80	+0.6
2,895,796	-		MPMX19_02750	0.81	-1.0
2,895,796	-		MPMX19_02750	0.81	-0.4
2,895,796	-		MPMX19_02750	0.81	+0.5
2,895,796	-		MPMX19_02750	0.81	-0.1
2,895,796	-		MPMX19_02750	0.81	+1.3
2,895,796	-		MPMX19_02750	0.81	+0.7
2,895,796	-		MPMX19_02750	0.81	-1.1
2,895,952	+				+1.0
2,895,952	+				-1.0
2,895,953	-				-0.2
2,896,161	+				-0.6
2,896,161	+				+1.5
2,896,161	+				+0.2
2,896,161	+				-0.1
2,896,161	+				-0.5
2,896,161	+				+0.9
2,896,161	+				-0.7
2,896,161	+				+0.5
2,896,161	+				+0.4
2,896,161	+				-0.9
2,896,161	+				-0.3
2,896,161	+				+0.7
2,896,161	+				-0.7
2,896,162	-				+0.9
2,896,162	-				+0.7
2,896,162	-				+0.7
2,896,162	-				-0.3
2,896,162	-				-1.2
2,896,162	-				-0.2
2,896,162	-				-0.8
2,896,162	-				+0.9
2,896,162	-				-3.1
2,896,162	-				+0.3
2,896,162	-				-0.3
2,896,193	+		MPMX19_02752	0.16	-1.6
2,896,193	+		MPMX19_02752	0.16	-0.4
2,896,193	+		MPMX19_02752	0.16	-0.6
2,896,193	+		MPMX19_02752	0.16	+0.7
2,896,193	+		MPMX19_02752	0.16	-0.9
2,896,193	+		MPMX19_02752	0.16	-1.2
2,896,193	+		MPMX19_02752	0.16	+0.1
2,896,194	-		MPMX19_02752	0.16	-0.1
2,896,194	-		MPMX19_02752	0.16	+0.7
2,896,194	-		MPMX19_02752	0.16	-0.6
2,896,194	-		MPMX19_02752	0.16	-0.1
2,896,194	-		MPMX19_02752	0.16	-0.9
2,896,208	+		MPMX19_02752	0.22	-1.2
2,896,208	+		MPMX19_02752	0.22	-1.7
2,896,208	+		MPMX19_02752	0.22	-1.3
2,896,208	+		MPMX19_02752	0.22	-0.2
2,896,209	-		MPMX19_02752	0.22	-0.2
2,896,209	-		MPMX19_02752	0.22	+0.1
2,896,209	-		MPMX19_02752	0.22	-0.9
2,896,209	-		MPMX19_02752	0.22	-1.4
2,896,245	+		MPMX19_02752	0.36	+0.4
2,896,252	-		MPMX19_02752	0.38	-1.2
2,896,252	-		MPMX19_02752	0.38	-0.3
2,896,346	+		MPMX19_02752	0.74	+0.1
2,896,347	-		MPMX19_02752	0.74	+0.1
2,896,365	+		MPMX19_02752	0.81	-0.7
2,896,365	+		MPMX19_02752	0.81	-1.1
2,896,366	-		MPMX19_02752	0.81	-0.8
2,897,087	-				+0.8
2,897,087	-				+1.1
2,897,087	-				-0.8
2,897,087	-				-1.7
2,897,087	-				+0.1
2,897,087	-				+0.7
2,897,087	-				+0.1
2,897,150	-				-0.5
2,897,249	+				-1.8
2,897,249	+				+0.1
2,897,249	+				+0.9
2,897,249	+				+0.7
2,897,249	+				-0.2
2,897,249	+				+0.5
2,897,249	+				+0.2
2,897,249	+				-0.8
2,897,249	+				+0.7
2,897,249	+				+0.8
2,897,249	+				-0.7
2,897,249	+				+1.1
2,897,249	+				-0.3
2,897,249	+				+0.4
2,897,249	+				-0.6
2,897,249	+				-0.1
2,897,249	+				-1.3
2,897,249	+				+0.2
2,897,249	+				+0.7
2,897,249	+				+0.1
2,897,249	+				+0.4
2,897,249	+				-0.9
2,897,249	+				+1.4
2,897,249	+				-0.8
2,897,249	+				-0.2
2,897,249	+				-1.3
2,897,249	+				+0.2
2,897,249	+				-0.3
2,897,250	-				-0.8
2,897,250	-				-0.4
2,897,250	-				+0.1
2,897,250	-				+1.5
2,897,250	-				+0.0
2,897,250	-				-0.1
2,897,250	-				+0.0
2,897,250	-				-0.1
2,897,250	-				+1.2
2,897,250	-				-1.3
2,897,250	-				-0.9
2,897,250	-				-0.2
2,897,250	-				-1.1
2,897,250	-				-0.3
2,897,250	-				+0.2
2,897,250	-				+0.0
2,897,250	-				+0.2
2,897,250	-				-0.9
2,897,250	-				-0.5
2,897,250	-				-0.3
2,897,250	-				+0.0
2,897,250	-				-0.6
2,897,362	+				-2.1
2,897,362	+				+0.7
2,897,362	+				+1.1
2,897,362	+				-0.6
2,897,362	+				-0.1
2,897,362	+				-1.7
2,897,362	+				-0.1
2,897,362	+				+0.4
2,897,362	+				+0.7
2,897,362	+				-0.6
2,897,362	+				-0.6
2,897,362	+				-0.7
2,897,362	+				-0.3
2,897,362	+				-0.8
2,897,362	+				-0.1
2,897,362	+				-0.2
2,897,362	+				-0.5
2,897,362	+				+1.4
2,897,362	+				-0.9
2,897,363	-				+0.2
2,897,363	-				-1.8
2,897,363	-				-0.5
2,897,363	-				-0.8
2,897,363	-				-1.1
2,897,363	-				+0.1
2,897,363	-				-0.5
2,897,363	-				-0.2
2,897,363	-				-1.1
2,897,363	-				+0.8
2,897,363	-				-1.0
2,897,363	-				+0.4
2,897,363	-				+0.4
2,897,363	-				+0.3