Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02692

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,812,046	+		MPMX19_02691	0.86	-0.1
2,812,046	+		MPMX19_02691	0.86	-0.3
2,812,046	+		MPMX19_02691	0.86	+1.2
2,812,046	+		MPMX19_02691	0.86	-0.1
2,812,046	+		MPMX19_02691	0.86	-1.2
2,812,046	+		MPMX19_02691	0.86	+0.2
2,812,046	+		MPMX19_02691	0.86	-0.3
2,812,046	+		MPMX19_02691	0.86	+0.4
2,812,046	+		MPMX19_02691	0.86	-0.5
2,812,046	+		MPMX19_02691	0.86	-0.4
2,812,047	-		MPMX19_02691	0.86	+1.1
2,812,047	-		MPMX19_02691	0.86	+1.1
2,812,047	-		MPMX19_02691	0.86	+1.2
2,812,047	-		MPMX19_02691	0.86	-2.7
2,812,047	-		MPMX19_02691	0.86	-0.9
2,812,047	-		MPMX19_02691	0.86	-1.8
2,812,242	+				+0.7
2,812,243	-				-0.1
2,812,488	+				-2.1
2,812,488	+				-2.2
2,812,530	+				-0.3
2,812,626	+				-2.3
2,812,626	+				-2.1
2,812,626	+				-0.3
2,812,626	+				-0.8
2,812,626	+				+0.2
2,812,626	+				+0.2
2,812,627	-				-0.4
2,812,627	-				-1.5
2,812,627	-				-0.6
2,812,627	-				-1.5
2,812,627	-				-1.0
2,812,627	-				-0.3
2,812,627	-				-0.5
2,812,745	+				+0.2
2,812,785	+				-1.1
2,812,786	-				+0.9
2,812,786	-				-2.0
2,812,849	+				+0.4
2,812,849	+				-2.5
2,812,849	+				-1.1
2,812,849	+				-0.7
2,812,849	+				-0.4
2,812,849	+				+2.2
2,812,849	+				-1.9
2,812,849	+				-0.2
2,812,849	+				+1.4
2,812,849	+				-0.3
2,812,849	+				+0.9
2,812,849	+				-0.6
2,812,849	+				-0.1
2,812,849	+				-0.6
2,812,850	-				+1.2
2,812,850	-				-0.5
2,812,850	-				+0.1
2,812,850	-				-0.6
2,812,850	-				+0.6
2,812,850	-				+0.7
2,812,850	-				-1.4
2,812,850	-				-0.5
2,812,850	-				-2.8
2,812,850	-				-1.4
2,812,850	-				-0.6
2,812,850	-				-1.7
2,812,850	-				+1.2
2,812,850	-				-0.0
2,812,850	-				-2.0
2,812,850	-				-0.6
2,812,850	-				+0.4
2,812,850	-				+0.3
2,812,850	-				-0.9
2,812,850	-				-1.0
2,812,850	-				+0.1
2,812,850	-				+0.7
2,812,850	-				-0.8
2,812,896	+				+0.4
2,812,930	+		MPMX19_02692	0.11	-1.3
2,812,930	+		MPMX19_02692	0.11	+0.7
2,812,930	+		MPMX19_02692	0.11	+0.8
2,812,930	+		MPMX19_02692	0.11	-1.5
2,812,930	+		MPMX19_02692	0.11	-1.1
2,812,930	+		MPMX19_02692	0.11	+0.2
2,812,931	-		MPMX19_02692	0.12	+0.1
2,812,931	-		MPMX19_02692	0.12	-1.3
2,812,931	-		MPMX19_02692	0.12	-0.4
2,812,931	-		MPMX19_02692	0.12	-0.9
2,812,931	-		MPMX19_02692	0.12	-0.7
2,812,931	-		MPMX19_02692	0.12	+0.3
2,812,931	-		MPMX19_02692	0.12	+0.4
2,812,931	-		MPMX19_02692	0.12	-0.7
2,812,931	-		MPMX19_02692	0.12	+0.8
2,812,931	-		MPMX19_02692	0.12	+1.7
2,812,931	-		MPMX19_02692	0.12	-1.1
2,812,931	-		MPMX19_02692	0.12	-0.6
2,812,931	-		MPMX19_02692	0.12	-0.3
2,812,931	-		MPMX19_02692	0.12	-1.2
2,813,124	+		MPMX19_02692	0.57	-0.8
2,813,124	+		MPMX19_02692	0.57	+0.4
2,813,124	+		MPMX19_02692	0.57	+0.1
2,813,124	+		MPMX19_02692	0.57	-0.3
2,813,124	+		MPMX19_02692	0.57	-0.2
2,813,124	+		MPMX19_02692	0.57	+0.1
2,813,124	+		MPMX19_02692	0.57	-0.8
2,813,125	-		MPMX19_02692	0.57	-1.5
2,813,125	-		MPMX19_02692	0.57	-0.2
2,813,125	-		MPMX19_02692	0.57	-0.3
2,813,125	-		MPMX19_02692	0.57	-1.6
2,813,125	-		MPMX19_02692	0.57	+0.2
2,813,125	-		MPMX19_02692	0.57	-0.1
2,813,125	-		MPMX19_02692	0.57	+0.5
2,813,125	-		MPMX19_02692	0.57	-0.6
2,813,297	+				-1.2
2,813,297	+				+0.1
2,813,297	+				+1.0
2,813,297	+				+0.7
2,813,297	+				-0.3
2,813,297	+				-0.3
2,813,386	+				-0.0
2,813,386	+				+0.7
2,813,386	+				+0.9
2,813,386	+				+0.0
2,813,386	+				-0.1
2,813,386	+				-1.8
2,813,387	-				-0.1
2,813,387	-				-1.2
2,813,387	-				-0.0
2,813,387	-				-0.0
2,813,387	-				-1.3
2,813,387	-				-0.5
2,813,495	+				-1.4
2,813,495	+				-0.1
2,813,495	+				-1.0
2,813,495	+				-1.5
2,813,495	+				+1.2
2,813,496	-				-0.3
2,813,496	-				-0.6
2,813,496	-				-0.3
2,813,496	-				-0.1
2,813,496	-				-1.4
2,813,496	-				-1.2
2,813,497	+				-0.9
2,813,497	+				-0.7
2,813,518	-				-1.5
2,813,557	+				+0.2
2,813,583	+				-0.8
2,813,583	+				-0.8
2,813,584	-				+0.2
2,813,584	-				+0.2
2,813,584	-				-1.3
2,813,584	-				-1.5
2,813,653	+				-0.1
2,813,653	+				-1.7
2,813,653	+				+0.2
2,813,653	+				+0.1
2,813,653	+				+2.2
2,813,654	-				-1.1
2,813,654	-				-0.1
2,813,654	-				-1.5
2,813,654	-				-0.1
2,813,654	-				-0.9
2,813,654	-				-0.1
2,813,654	-				-1.0
2,813,654	-				-0.2
2,813,654	-				-1.8
2,813,654	-				+0.1
2,813,654	-				+0.5
2,813,663	+				-0.2
2,813,663	+				+0.2
2,813,663	+				-0.8
2,813,663	+				-0.9
2,813,663	+				-0.2
2,813,663	+				-0.1
2,813,663	+				+0.3
2,813,663	+				-1.6
2,813,663	+				-0.3
2,813,663	+				-1.4
2,813,663	+				-0.8
2,813,664	-				-0.4
2,813,664	-				-0.3
2,813,664	-				+0.2
2,813,664	-				+0.0
2,813,664	-				-0.3
2,813,664	-				-1.1
2,813,664	-				-0.7
2,813,664	-				+0.7
2,813,664	-				+0.2
2,813,664	-				-1.2
2,813,664	-				-0.2
2,813,664	-				-1.6
2,813,664	-				+0.9
2,813,664	-				+0.2
2,813,664	-				-2.2
2,813,664	-				-1.1
2,813,691	+				-0.3
2,813,691	+				+1.1
2,813,692	-				+0.8
2,813,692	-				-1.5
2,813,692	-				-1.9
2,813,788	+				+0.0
2,813,788	+				+0.7
2,813,788	+				+0.2
2,813,788	+				+0.2
2,813,788	+				-1.1
2,813,788	+				+0.2
2,813,788	+				-0.9
2,813,788	+				-2.2
2,813,788	+				-0.8
2,813,788	+				-2.5
2,813,789	-				-1.4
2,813,789	-				+0.2
2,813,789	-				-0.9
2,813,789	-				+0.1
2,813,789	-				+0.7
2,813,789	-				+0.8
2,813,825	+				-1.0
2,813,825	+				-2.1
2,813,825	+				-0.3
2,813,825	+				-1.2
2,813,825	+				-2.9
2,813,825	+				-0.8
2,813,825	+				-0.8
2,813,826	-				-1.1
2,813,826	-				+1.0
2,813,826	-				+0.1
2,813,826	-				-1.6
2,813,826	-				-1.9
2,813,915	+		MPMX19_02693	0.13	-0.6
2,813,916	-		MPMX19_02693	0.13	-3.1
2,813,916	-		MPMX19_02693	0.13	+0.6
2,813,977	+		MPMX19_02693	0.16	-0.5
2,813,977	+		MPMX19_02693	0.16	-1.6
2,813,977	+		MPMX19_02693	0.16	-0.8
2,813,977	+		MPMX19_02693	0.16	-0.6
2,813,977	+		MPMX19_02693	0.16	-1.6
2,813,977	+		MPMX19_02693	0.16	-1.3
2,813,977	+		MPMX19_02693	0.16	-0.1
2,813,977	+		MPMX19_02693	0.16	-0.8
2,813,977	+		MPMX19_02693	0.16	-0.1
2,813,977	+		MPMX19_02693	0.16	-1.3
2,813,977	+		MPMX19_02693	0.16	-1.2
2,813,977	+		MPMX19_02693	0.16	-0.1
2,813,977	+		MPMX19_02693	0.16	+1.0
2,813,977	+		MPMX19_02693	0.16	+0.4
2,813,977	+		MPMX19_02693	0.16	-1.5
2,813,977	+		MPMX19_02693	0.16	-0.9
2,813,977	+		MPMX19_02693	0.16	-0.5
2,813,977	+		MPMX19_02693	0.16	-0.1
2,813,977	+		MPMX19_02693	0.16	-0.0
2,813,977	+		MPMX19_02693	0.16	-0.7
2,813,977	+		MPMX19_02693	0.16	+0.5
2,813,977	+		MPMX19_02693	0.16	-0.3
2,813,977	+		MPMX19_02693	0.16	-1.8
2,813,977	+		MPMX19_02693	0.16	-0.3
2,813,977	+		MPMX19_02693	0.16	+1.1
2,813,977	+		MPMX19_02693	0.16	-1.2
2,813,977	+		MPMX19_02693	0.16	+0.2
2,813,977	+		MPMX19_02693	0.16	+0.1
2,813,977	+		MPMX19_02693	0.16	-0.6
2,813,977	+		MPMX19_02693	0.16	-0.9
2,813,977	+		MPMX19_02693	0.16	-1.5
2,813,977	+		MPMX19_02693	0.16	+0.0
2,813,977	+		MPMX19_02693	0.16	-0.8
2,813,977	+		MPMX19_02693	0.16	-0.1
2,813,977	+		MPMX19_02693	0.16	+1.2
2,813,977	+		MPMX19_02693	0.16	+0.1
2,813,977	+		MPMX19_02693	0.16	-1.8
2,813,977	+		MPMX19_02693	0.16	-0.4
2,813,977	+		MPMX19_02693	0.16	-1.0
2,813,977	+		MPMX19_02693	0.16	+1.5
2,813,977	+		MPMX19_02693	0.16	-1.1
2,813,977	+		MPMX19_02693	0.16	+0.2
2,813,977	+		MPMX19_02693	0.16	+0.1
2,813,977	+		MPMX19_02693	0.16	-0.5
2,813,977	+		MPMX19_02693	0.16	-1.0
2,813,977	+		MPMX19_02693	0.16	-0.6
2,813,977	+		MPMX19_02693	0.16	-0.8
2,813,977	+		MPMX19_02693	0.16	-0.1
2,813,977	+		MPMX19_02693	0.16	-0.8
2,813,978	-		MPMX19_02693	0.16	-0.6
2,813,978	-		MPMX19_02693	0.16	+0.2
2,813,978	-		MPMX19_02693	0.16	-2.5
2,813,978	-		MPMX19_02693	0.16	+0.2
2,813,978	-		MPMX19_02693	0.16	+0.2
2,813,978	-		MPMX19_02693	0.16	+0.7
2,813,978	-		MPMX19_02693	0.16	-0.3
2,813,978	-		MPMX19_02693	0.16	-0.8
2,813,978	-		MPMX19_02693	0.16	+0.9
2,813,978	-		MPMX19_02693	0.16	-1.3
2,813,978	-		MPMX19_02693	0.16	+0.5
2,813,978	-		MPMX19_02693	0.16	-0.1
2,813,978	-		MPMX19_02693	0.16	-0.6
2,813,978	-		MPMX19_02693	0.16	+1.8
2,813,978	-		MPMX19_02693	0.16	-0.7
2,813,978	-		MPMX19_02693	0.16	+1.7
2,813,978	-		MPMX19_02693	0.16	-1.2
2,813,978	-		MPMX19_02693	0.16	+1.1
2,813,978	-		MPMX19_02693	0.16	-0.6
2,813,978	-		MPMX19_02693	0.16	+1.2
2,813,978	-		MPMX19_02693	0.16	-1.2
2,813,978	-		MPMX19_02693	0.16	-0.1
2,813,978	-		MPMX19_02693	0.16	-1.1
2,813,978	-		MPMX19_02693	0.16	+0.1
2,813,978	-		MPMX19_02693	0.16	-2.1
2,813,978	-		MPMX19_02693	0.16	+0.4
2,813,978	-		MPMX19_02693	0.16	+0.2
2,813,978	-		MPMX19_02693	0.16	+0.4
2,813,978	-		MPMX19_02693	0.16	-0.6
2,813,978	-		MPMX19_02693	0.16	-0.9
2,813,978	-		MPMX19_02693	0.16	-2.4
2,813,978	-		MPMX19_02693	0.16	-1.0
2,813,978	-		MPMX19_02693	0.16	-0.6
2,813,978	-		MPMX19_02693	0.16	-0.3
2,813,978	-		MPMX19_02693	0.16	-1.2
2,813,978	-		MPMX19_02693	0.16	+0.2
2,814,033	+		MPMX19_02693	0.18	-2.0
2,814,033	+		MPMX19_02693	0.18	-0.9
2,814,034	-		MPMX19_02693	0.18	+2.0
2,814,034	-		MPMX19_02693	0.18	+1.4
2,814,034	-		MPMX19_02693	0.18	+0.2
2,814,034	-		MPMX19_02693	0.18	+0.1
2,814,034	-		MPMX19_02693	0.18	-1.8
2,814,034	-		MPMX19_02693	0.18	-1.7
2,814,034	-		MPMX19_02693	0.18	+0.2
2,814,095	+		MPMX19_02693	0.21	+0.4
2,814,095	+		MPMX19_02693	0.21	-1.8
2,814,096	-		MPMX19_02693	0.21	-1.1
2,814,096	-		MPMX19_02693	0.21	-0.2
2,814,096	-		MPMX19_02693	0.21	-1.5
2,814,186	+		MPMX19_02693	0.26	-1.6
2,814,186	+		MPMX19_02693	0.26	-0.2
2,814,186	+		MPMX19_02693	0.26	-2.1
2,814,187	-		MPMX19_02693	0.26	-0.6
2,814,220	+		MPMX19_02693	0.27	-1.7
2,814,220	+		MPMX19_02693	0.27	-0.2
2,814,220	+		MPMX19_02693	0.27	-1.1
2,814,220	+		MPMX19_02693	0.27	+0.7
2,814,220	+		MPMX19_02693	0.27	+0.2
2,814,220	+		MPMX19_02693	0.27	-2.0
2,814,220	+		MPMX19_02693	0.27	-2.6
2,814,220	+		MPMX19_02693	0.27	-0.3
2,814,220	+		MPMX19_02693	0.27	-0.2
2,814,220	+		MPMX19_02693	0.27	-1.5
2,814,220	+		MPMX19_02693	0.27	-1.8
2,814,221	-		MPMX19_02693	0.27	-1.3
2,814,221	-		MPMX19_02693	0.27	-1.6
2,814,221	-		MPMX19_02693	0.27	+0.5
2,814,221	-		MPMX19_02693	0.27	-1.1
2,814,221	-		MPMX19_02693	0.27	-0.3
2,814,221	-		MPMX19_02693	0.27	-0.3
2,814,221	-		MPMX19_02693	0.27	+0.1
2,814,221	-		MPMX19_02693	0.27	-0.8
2,814,221	-		MPMX19_02693	0.27	-1.3
2,814,246	-		MPMX19_02693	0.29	-0.0