Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02691

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,810,568	+		MPMX19_02690	0.55	-1.7
2,810,593	-		MPMX19_02690	0.56	-0.2
2,810,593	-		MPMX19_02690	0.56	+0.8
2,810,593	-		MPMX19_02690	0.56	-0.7
2,810,593	-		MPMX19_02690	0.56	+0.1
2,810,593	-		MPMX19_02690	0.56	-0.3
2,810,604	+		MPMX19_02690	0.57	-1.7
2,810,605	-		MPMX19_02690	0.57	-0.1
2,810,658	+		MPMX19_02690	0.59	-2.1
2,810,682	+		MPMX19_02690	0.60	-0.6
2,810,682	+		MPMX19_02690	0.60	-0.6
2,810,737	-		MPMX19_02690	0.63	+1.5
2,810,784	+		MPMX19_02690	0.65	-1.4
2,810,785	-		MPMX19_02690	0.65	-1.7
2,810,785	-		MPMX19_02690	0.65	+0.4
2,810,785	-		MPMX19_02690	0.65	+0.7
2,810,785	-		MPMX19_02690	0.65	-1.8
2,810,811	+		MPMX19_02690	0.66	-0.1
2,810,811	+		MPMX19_02690	0.66	+0.4
2,810,811	+		MPMX19_02690	0.66	-1.3
2,810,811	+		MPMX19_02690	0.66	-1.2
2,810,811	+		MPMX19_02690	0.66	-0.3
2,810,811	+		MPMX19_02690	0.66	-2.3
2,810,811	+		MPMX19_02690	0.66	-0.8
2,810,812	-		MPMX19_02690	0.66	-0.3
2,810,812	-		MPMX19_02690	0.66	-0.6
2,811,053	+		MPMX19_02690	0.77	-2.1
2,811,053	+		MPMX19_02690	0.77	+0.3
2,811,053	+		MPMX19_02690	0.77	-0.9
2,811,053	+		MPMX19_02690	0.77	-0.1
2,811,053	+		MPMX19_02690	0.77	-0.9
2,811,053	+		MPMX19_02690	0.77	+0.4
2,811,053	+		MPMX19_02690	0.77	-0.2
2,811,053	+		MPMX19_02690	0.77	-0.9
2,811,053	+		MPMX19_02690	0.77	+0.7
2,811,053	+		MPMX19_02690	0.77	+0.2
2,811,053	+		MPMX19_02690	0.77	+1.2
2,811,053	+		MPMX19_02690	0.77	-1.1
2,811,053	+		MPMX19_02690	0.77	+0.8
2,811,053	+		MPMX19_02690	0.77	+1.4
2,811,053	+		MPMX19_02690	0.77	-1.7
2,811,053	+		MPMX19_02690	0.77	-0.5
2,811,053	+		MPMX19_02690	0.77	-1.8
2,811,053	+		MPMX19_02690	0.77	-0.1
2,811,053	+		MPMX19_02690	0.77	-0.8
2,811,053	+		MPMX19_02690	0.77	-0.0
2,811,053	+		MPMX19_02690	0.77	-0.3
2,811,053	+		MPMX19_02690	0.77	-0.9
2,811,053	+		MPMX19_02690	0.77	-0.4
2,811,054	-		MPMX19_02690	0.77	+0.7
2,811,054	-		MPMX19_02690	0.77	-0.1
2,811,054	-		MPMX19_02690	0.77	-0.6
2,811,054	-		MPMX19_02690	0.77	-0.2
2,811,054	-		MPMX19_02690	0.77	-0.8
2,811,054	-		MPMX19_02690	0.77	-0.8
2,811,054	-		MPMX19_02690	0.77	-0.1
2,811,054	-		MPMX19_02690	0.77	-1.8
2,811,054	-		MPMX19_02690	0.77	+1.5
2,811,054	-		MPMX19_02690	0.77	-0.1
2,811,054	-		MPMX19_02690	0.77	-1.8
2,811,054	-		MPMX19_02690	0.77	-1.6
2,811,054	-		MPMX19_02690	0.77	-0.2
2,811,054	-		MPMX19_02690	0.77	+0.9
2,811,054	-		MPMX19_02690	0.77	-1.1
2,811,054	-		MPMX19_02690	0.77	+0.2
2,811,054	-		MPMX19_02690	0.77	+0.4
2,811,054	-		MPMX19_02690	0.77	-0.6
2,811,054	-		MPMX19_02690	0.77	+2.5
2,811,054	-		MPMX19_02690	0.77	+0.7
2,811,054	-		MPMX19_02690	0.77	-0.9
2,811,093	+		MPMX19_02690	0.79	-2.1
2,811,093	+		MPMX19_02690	0.79	-1.1
2,811,093	+		MPMX19_02690	0.79	-0.1
2,811,093	+		MPMX19_02690	0.79	-0.6
2,811,094	-		MPMX19_02690	0.79	-0.5
2,811,096	+		MPMX19_02690	0.79	-1.3
2,811,096	+		MPMX19_02690	0.79	-0.3
2,811,096	+		MPMX19_02690	0.79	-1.1
2,811,096	+		MPMX19_02690	0.79	-0.3
2,811,096	+		MPMX19_02690	0.79	+0.2
2,811,096	+		MPMX19_02690	0.79	-0.9
2,811,096	+		MPMX19_02690	0.79	-1.2
2,811,096	+		MPMX19_02690	0.79	-0.9
2,811,096	+		MPMX19_02690	0.79	-0.9
2,811,096	+		MPMX19_02690	0.79	-1.8
2,811,096	+		MPMX19_02690	0.79	+1.2
2,811,096	+		MPMX19_02690	0.79	+1.2
2,811,096	+		MPMX19_02690	0.79	-1.3
2,811,096	+		MPMX19_02690	0.79	-0.6
2,811,096	+		MPMX19_02690	0.79	+1.6
2,811,096	+		MPMX19_02690	0.79	-0.1
2,811,096	+		MPMX19_02690	0.79	-0.6
2,811,096	+		MPMX19_02690	0.79	+0.5
2,811,096	+		MPMX19_02690	0.79	-0.1
2,811,096	+		MPMX19_02690	0.79	-0.5
2,811,096	+		MPMX19_02690	0.79	+1.2
2,811,096	+		MPMX19_02690	0.79	-0.2
2,811,096	+		MPMX19_02690	0.79	-1.0
2,811,096	+		MPMX19_02690	0.79	+0.2
2,811,097	-		MPMX19_02690	0.79	+1.6
2,811,097	-		MPMX19_02690	0.79	+0.2
2,811,097	-		MPMX19_02690	0.79	+0.7
2,811,097	-		MPMX19_02690	0.79	+0.4
2,811,097	-		MPMX19_02690	0.79	+0.4
2,811,097	-		MPMX19_02690	0.79	+2.0
2,811,097	-		MPMX19_02690	0.79	-0.5
2,811,097	-		MPMX19_02690	0.79	+1.2
2,811,097	-		MPMX19_02690	0.79	+0.5
2,811,097	-		MPMX19_02690	0.79	-0.6
2,811,097	-		MPMX19_02690	0.79	+0.7
2,811,097	-		MPMX19_02690	0.79	-0.6
2,811,097	-		MPMX19_02690	0.79	-1.2
2,811,097	-		MPMX19_02690	0.79	-1.5
2,811,097	-		MPMX19_02690	0.79	+0.1
2,811,097	-		MPMX19_02690	0.79	+0.9
2,811,097	-		MPMX19_02690	0.79	-0.2
2,811,097	-		MPMX19_02690	0.79	-0.8
2,811,097	-		MPMX19_02690	0.79	-0.9
2,811,097	-		MPMX19_02690	0.79	+0.3
2,811,097	-		MPMX19_02690	0.79	-1.7
2,811,097	-		MPMX19_02690	0.79	-1.9
2,811,097	-		MPMX19_02690	0.79	+0.1
2,811,097	-		MPMX19_02690	0.79	-0.8
2,811,097	-		MPMX19_02690	0.79	-0.0
2,811,097	-		MPMX19_02690	0.79	-0.3
2,811,097	-		MPMX19_02690	0.79	-0.3
2,811,097	-		MPMX19_02690	0.79	-0.6
2,811,097	-		MPMX19_02690	0.79	-2.4
2,811,097	-		MPMX19_02690	0.79	-0.8
2,811,097	-		MPMX19_02690	0.79	-2.9
2,811,139	+		MPMX19_02690	0.81	+0.0
2,811,139	+		MPMX19_02690	0.81	-0.8
2,811,139	+		MPMX19_02690	0.81	+0.2
2,811,140	-		MPMX19_02690	0.81	-0.6
2,811,140	-		MPMX19_02690	0.81	-0.7
2,811,140	-		MPMX19_02690	0.81	-0.8
2,811,140	-		MPMX19_02690	0.81	-0.3
2,811,140	-		MPMX19_02690	0.81	-1.2
2,811,140	-		MPMX19_02690	0.81	-0.1
2,811,191	+		MPMX19_02690	0.84	+1.2
2,811,191	+		MPMX19_02690	0.84	-3.4
2,811,191	+		MPMX19_02690	0.84	+0.6
2,811,192	-		MPMX19_02690	0.84	-1.9
2,811,192	-		MPMX19_02690	0.84	+0.8
2,811,192	-		MPMX19_02690	0.84	-0.9
2,811,192	-		MPMX19_02690	0.84	-0.8
2,811,328	+				-0.8
2,811,346	+				+0.7
2,811,390	+				-0.5
2,811,390	+				-1.2
2,811,390	+				-0.8
2,811,390	+				-0.6
2,811,390	+				-0.1
2,811,390	+				-1.2
2,811,390	+				-0.6
2,811,390	+				+0.2
2,811,390	+				-0.3
2,811,390	+				-1.2
2,811,390	+				-2.6
2,811,390	+				-0.8
2,811,390	+				-0.9
2,811,390	+				+1.8
2,811,390	+				+0.8
2,811,390	+				+0.9
2,811,390	+				+0.1
2,811,390	+				-1.6
2,811,390	+				-1.4
2,811,390	+				-0.4
2,811,390	+				-0.1
2,811,390	+				-0.6
2,811,390	+				-1.2
2,811,390	+				-0.6
2,811,390	+				+0.7
2,811,390	+				-0.7
2,811,390	+				-1.3
2,811,390	+				+0.2
2,811,390	+				-0.3
2,811,390	+				-0.8
2,811,391	-				+0.1
2,811,391	-				-1.1
2,811,391	-				-0.6
2,811,391	-				-1.0
2,811,391	-				+0.2
2,811,391	-				-0.1
2,811,391	-				+0.2
2,811,391	-				-0.3
2,811,391	-				-2.0
2,811,391	-				+0.9
2,811,391	-				-0.1
2,811,391	-				+0.7
2,811,391	-				+0.1
2,811,391	-				+0.2
2,811,391	-				+1.7
2,811,391	-				-2.0
2,811,391	-				-1.2
2,811,391	-				-1.6
2,811,391	-				-1.2
2,811,391	-				-1.0
2,811,391	-				-0.8
2,811,391	-				+0.1
2,811,391	-				+0.5
2,811,391	-				-1.6
2,811,391	-				+1.0
2,811,391	-				+0.2
2,811,391	-				+0.3
2,811,391	-				+1.0
2,811,391	-				-0.6
2,811,391	-				-1.6
2,811,391	-				-1.5
2,811,391	-				+0.7
2,811,391	-				-0.1
2,811,391	-				-1.0
2,811,391	-				-0.3
2,811,391	-				-1.1
2,811,391	-				+0.5
2,811,391	-				+0.7
2,811,391	-				+0.2
2,811,391	-				-1.1
2,811,391	-				-0.1
2,811,391	-				+0.7
2,811,509	+				-0.1
2,811,509	+				-0.8
2,811,509	+				-1.1
2,811,509	+				-0.2
2,811,509	+				-1.6
2,811,509	+				+0.5
2,811,509	+				-0.1
2,811,509	+				-0.9
2,811,509	+				+0.2
2,811,509	+				-0.5
2,811,509	+				-1.3
2,811,510	-				+0.2
2,811,510	-				-0.8
2,811,510	-				-0.8
2,811,510	-				-0.5
2,811,510	-				-0.7
2,811,510	-				+0.2
2,811,510	-				-0.5
2,811,528	+				-0.6
2,811,528	+				-1.3
2,811,528	+				-1.1
2,811,528	+				-0.8
2,811,528	+				-0.2
2,811,528	+				-0.2
2,811,529	-				-0.1
2,811,529	-				-0.3
2,811,529	-				+0.2
2,811,529	-				+0.0
2,811,529	-				-0.6
2,811,529	-				-0.8
2,811,702	+		MPMX19_02691	0.27	-0.1
2,811,702	+		MPMX19_02691	0.27	-0.6
2,811,702	+		MPMX19_02691	0.27	-0.8
2,811,702	+		MPMX19_02691	0.27	+0.7
2,811,702	+		MPMX19_02691	0.27	+0.4
2,811,703	-		MPMX19_02691	0.27	+1.0
2,811,703	-		MPMX19_02691	0.27	+1.9
2,811,703	-		MPMX19_02691	0.27	-0.3
2,811,854	+		MPMX19_02691	0.53	-0.3
2,811,854	+		MPMX19_02691	0.53	-0.5
2,811,854	+		MPMX19_02691	0.53	-0.5
2,811,854	+		MPMX19_02691	0.53	-0.1
2,811,855	-		MPMX19_02691	0.53	-1.7
2,812,046	+		MPMX19_02691	0.86	-0.1
2,812,046	+		MPMX19_02691	0.86	-0.3
2,812,046	+		MPMX19_02691	0.86	+1.2
2,812,046	+		MPMX19_02691	0.86	-0.1
2,812,046	+		MPMX19_02691	0.86	-1.2
2,812,046	+		MPMX19_02691	0.86	+0.2
2,812,046	+		MPMX19_02691	0.86	-0.3
2,812,046	+		MPMX19_02691	0.86	+0.4
2,812,046	+		MPMX19_02691	0.86	-0.5
2,812,046	+		MPMX19_02691	0.86	-0.4
2,812,047	-		MPMX19_02691	0.86	+1.1
2,812,047	-		MPMX19_02691	0.86	+1.1
2,812,047	-		MPMX19_02691	0.86	+1.2
2,812,047	-		MPMX19_02691	0.86	-2.7
2,812,047	-		MPMX19_02691	0.86	-0.9
2,812,047	-		MPMX19_02691	0.86	-1.8
2,812,242	+				+0.7
2,812,243	-				-0.1
2,812,488	+				-2.1
2,812,488	+				-2.2
2,812,530	+				-0.3
2,812,626	+				-2.3
2,812,626	+				-2.1
2,812,626	+				-0.3
2,812,626	+				-0.8
2,812,626	+				+0.2
2,812,626	+				+0.2
2,812,627	-				-0.4
2,812,627	-				-1.5
2,812,627	-				-0.6
2,812,627	-				-1.5
2,812,627	-				-1.0
2,812,627	-				-0.3
2,812,627	-				-0.5
2,812,745	+				+0.2
2,812,785	+				-1.1
2,812,786	-				+0.9
2,812,786	-				-2.0
2,812,849	+				+0.4
2,812,849	+				-2.5
2,812,849	+				-1.1
2,812,849	+				-0.7
2,812,849	+				-0.4
2,812,849	+				+2.2
2,812,849	+				-1.9
2,812,849	+				-0.2
2,812,849	+				+1.4
2,812,849	+				-0.3
2,812,849	+				+0.9
2,812,849	+				-0.6
2,812,849	+				-0.1
2,812,849	+				-0.6
2,812,850	-				+1.2
2,812,850	-				-0.5
2,812,850	-				+0.1
2,812,850	-				-0.6
2,812,850	-				+0.6
2,812,850	-				+0.7
2,812,850	-				-1.4
2,812,850	-				-0.5
2,812,850	-				-2.8
2,812,850	-				-1.4
2,812,850	-				-0.6
2,812,850	-				-1.7
2,812,850	-				+1.2
2,812,850	-				-0.0
2,812,850	-				-2.0
2,812,850	-				-0.6
2,812,850	-				+0.4
2,812,850	-				+0.3
2,812,850	-				-0.9
2,812,850	-				-1.0
2,812,850	-				+0.1
2,812,850	-				+0.7
2,812,850	-				-0.8
2,812,896	+				+0.4
2,812,930	+		MPMX19_02692	0.11	-1.3
2,812,930	+		MPMX19_02692	0.11	+0.7
2,812,930	+		MPMX19_02692	0.11	+0.8
2,812,930	+		MPMX19_02692	0.11	-1.5
2,812,930	+		MPMX19_02692	0.11	-1.1
2,812,930	+		MPMX19_02692	0.11	+0.2
2,812,931	-		MPMX19_02692	0.12	+0.1
2,812,931	-		MPMX19_02692	0.12	-1.3
2,812,931	-		MPMX19_02692	0.12	-0.4
2,812,931	-		MPMX19_02692	0.12	-0.9
2,812,931	-		MPMX19_02692	0.12	-0.7
2,812,931	-		MPMX19_02692	0.12	+0.3
2,812,931	-		MPMX19_02692	0.12	+0.4
2,812,931	-		MPMX19_02692	0.12	-0.7
2,812,931	-		MPMX19_02692	0.12	+0.8
2,812,931	-		MPMX19_02692	0.12	+1.7
2,812,931	-		MPMX19_02692	0.12	-1.1
2,812,931	-		MPMX19_02692	0.12	-0.6
2,812,931	-		MPMX19_02692	0.12	-0.3
2,812,931	-		MPMX19_02692	0.12	-1.2
2,813,124	+		MPMX19_02692	0.57	-0.8
2,813,124	+		MPMX19_02692	0.57	+0.4
2,813,124	+		MPMX19_02692	0.57	+0.1
2,813,124	+		MPMX19_02692	0.57	-0.3
2,813,124	+		MPMX19_02692	0.57	-0.2
2,813,124	+		MPMX19_02692	0.57	+0.1
2,813,124	+		MPMX19_02692	0.57	-0.8
2,813,125	-		MPMX19_02692	0.57	-1.5
2,813,125	-		MPMX19_02692	0.57	-0.2
2,813,125	-		MPMX19_02692	0.57	-0.3
2,813,125	-		MPMX19_02692	0.57	-1.6
2,813,125	-		MPMX19_02692	0.57	+0.2
2,813,125	-		MPMX19_02692	0.57	-0.1
2,813,125	-		MPMX19_02692	0.57	+0.5
2,813,125	-		MPMX19_02692	0.57	-0.6