Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02679

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,798,100	+		MPMX19_02677	0.79	-1.4
2,798,100	+		MPMX19_02677	0.79	-0.4
2,798,100	+		MPMX19_02677	0.79	-2.1
2,798,100	+		MPMX19_02677	0.79	-1.8
2,798,101	-		MPMX19_02677	0.79	+1.1
2,798,101	-		MPMX19_02677	0.79	-0.2
2,798,101	-		MPMX19_02677	0.79	-1.2
2,798,101	-		MPMX19_02677	0.79	+1.5
2,798,101	-		MPMX19_02677	0.79	+0.9
2,798,101	-		MPMX19_02677	0.79	-0.8
2,798,101	-		MPMX19_02677	0.79	-2.4
2,798,101	-		MPMX19_02677	0.79	-1.1
2,798,101	-		MPMX19_02677	0.79	-0.7
2,798,154	+				-0.3
2,798,154	+				+0.5
2,798,154	+				-0.9
2,798,154	+				-1.3
2,798,154	+				-1.3
2,798,154	+				-0.8
2,798,154	+				-0.1
2,798,154	+				+0.5
2,798,154	+				-0.3
2,798,154	+				-1.3
2,798,154	+				+0.2
2,798,154	+				+0.1
2,798,154	+				-1.2
2,798,154	+				-1.2
2,798,154	+				-1.2
2,798,154	+				-1.2
2,798,154	+				-2.1
2,798,154	+				-1.4
2,798,154	+				-0.2
2,798,154	+				+0.9
2,798,154	+				+0.2
2,798,154	+				-0.3
2,798,154	+				-1.0
2,798,154	+				-1.7
2,798,154	+				-1.5
2,798,154	+				-1.3
2,798,154	+				-1.2
2,798,154	+				-1.2
2,798,154	+				-1.3
2,798,155	-				-1.6
2,798,155	-				-1.6
2,798,155	-				-0.2
2,798,155	-				-0.1
2,798,155	-				-0.9
2,798,155	-				+0.7
2,798,155	-				-0.6
2,798,155	-				-1.3
2,798,155	-				-0.3
2,798,155	-				-0.3
2,798,155	-				-0.3
2,798,155	-				-1.5
2,798,155	-				+0.8
2,798,155	-				-1.0
2,798,155	-				-0.6
2,798,155	-				-0.3
2,798,155	-				-0.8
2,798,155	-				+1.7
2,798,155	-				-1.6
2,798,155	-				+0.2
2,798,210	+				+0.2
2,798,210	+				-1.2
2,798,210	+				-0.8
2,798,210	+				-0.8
2,798,210	+				-0.4
2,798,210	+				-1.9
2,798,210	+				-1.0
2,798,210	+				+0.7
2,798,210	+				+0.3
2,798,211	-				-0.5
2,798,211	-				+0.0
2,798,211	-				-0.9
2,798,211	-				-1.1
2,798,211	-				-1.2
2,798,211	-				-1.1
2,798,211	-				-0.1
2,798,211	-				-1.6
2,798,855	+				-0.5
2,798,856	-				-0.1
2,798,856	-				-2.5
2,798,857	+				-1.5
2,798,857	+				+0.2
2,798,858	-				-0.8
2,798,858	-				-0.8
2,798,862	+				+0.8
2,798,862	+				+1.2
2,798,863	-				+0.0
2,798,883	-				-3.1
2,798,915	-				-0.6
2,799,057	+				+0.9
2,799,057	+				-1.5
2,799,057	+				-1.8
2,799,057	+				+1.2
2,799,058	-				-0.4
2,799,228	+		MPMX19_02679	0.33	+0.1
2,799,228	+		MPMX19_02679	0.33	+0.5
2,799,228	+		MPMX19_02679	0.33	-0.6
2,799,228	+		MPMX19_02679	0.33	-1.2
2,799,228	+		MPMX19_02679	0.33	-1.5
2,799,228	+		MPMX19_02679	0.33	-1.9
2,799,228	+		MPMX19_02679	0.33	-2.7
2,799,229	-		MPMX19_02679	0.34	+0.7
2,799,229	-		MPMX19_02679	0.34	-2.2
2,799,229	-		MPMX19_02679	0.34	+0.0
2,799,229	-		MPMX19_02679	0.34	+1.2
2,799,229	-		MPMX19_02679	0.34	-0.6
2,799,526	+				-0.2
2,799,526	+				-0.3
2,799,526	+				+1.2
2,799,526	+				-1.1
2,799,527	-				+0.1
2,799,527	-				-1.2
2,799,527	-				-0.6
2,799,527	-				-0.1
2,799,527	-				+1.5
2,799,527	-				-0.7
2,799,527	-				-1.6
2,799,527	-				-0.3
2,799,546	+				+0.7
2,799,546	+				+0.7
2,799,548	+				-1.1
2,799,548	+				-0.2
2,799,548	+				-0.6
2,799,549	-				-1.2
2,799,549	-				-1.0
2,799,565	+				-0.1
2,799,565	+				-0.4
2,799,566	-				+0.9
2,799,591	+				+0.4
2,800,076	+		MPMX19_02680	0.58	-1.1
2,800,076	+		MPMX19_02680	0.58	-0.6
2,800,076	+		MPMX19_02680	0.58	-0.3
2,800,076	+		MPMX19_02680	0.58	+0.2
2,800,076	+		MPMX19_02680	0.58	-1.0
2,800,076	+		MPMX19_02680	0.58	-1.5
2,800,076	+		MPMX19_02680	0.58	+0.2
2,800,077	-		MPMX19_02680	0.58	-1.7
2,800,077	-		MPMX19_02680	0.58	-2.6
2,800,077	-		MPMX19_02680	0.58	-1.7
2,800,077	-		MPMX19_02680	0.58	+0.3
2,800,077	-		MPMX19_02680	0.58	+0.8
2,800,077	-		MPMX19_02680	0.58	-0.3
2,800,077	-		MPMX19_02680	0.58	-0.9
2,800,106	+		MPMX19_02680	0.62	+0.1
2,800,106	+		MPMX19_02680	0.62	-0.5
2,800,106	+		MPMX19_02680	0.62	+0.2
2,800,106	+		MPMX19_02680	0.62	-0.3
2,800,106	+		MPMX19_02680	0.62	-1.2
2,800,106	+		MPMX19_02680	0.62	-0.8
2,800,107	-		MPMX19_02680	0.62	-0.8
2,800,107	-		MPMX19_02680	0.62	+0.0
2,800,107	-		MPMX19_02680	0.62	+0.4
2,800,107	-		MPMX19_02680	0.62	+0.4
2,800,107	-		MPMX19_02680	0.62	-0.9
2,800,107	-		MPMX19_02680	0.62	-1.1
2,800,107	-		MPMX19_02680	0.62	+0.7
2,800,107	-		MPMX19_02680	0.62	-1.9
2,800,214	+		MPMX19_02680	0.76	-0.4
2,800,214	+		MPMX19_02680	0.76	+1.0
2,800,214	+		MPMX19_02680	0.76	-1.7
2,800,214	+		MPMX19_02680	0.76	-0.3
2,800,215	-		MPMX19_02680	0.76	-1.2
2,800,215	-		MPMX19_02680	0.76	-1.3
2,800,215	-		MPMX19_02680	0.76	-1.3
2,800,215	-		MPMX19_02680	0.76	+0.2
2,800,394	+				-0.2
2,800,394	+				+1.6
2,800,394	+				+0.0
2,800,394	+				-0.3
2,800,394	+				-0.6
2,800,394	+				-2.6
2,800,394	+				-0.5
2,800,395	-				-1.5
2,800,395	-				-1.1
2,800,395	-				-0.6
2,800,395	-				-0.2
2,800,395	-				+0.2
2,800,395	-				-0.6
2,800,395	-				-0.7
2,800,395	-				+0.5
2,800,395	-				-0.8