Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02658

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,776,598	+		MPMX19_02657	0.84	-0.3
2,776,599	-		MPMX19_02657	0.84	-1.3
2,776,599	-		MPMX19_02657	0.84	-0.8
2,776,610	+		MPMX19_02657	0.84	-0.5
2,776,610	+		MPMX19_02657	0.84	-0.3
2,776,610	+		MPMX19_02657	0.84	-0.3
2,776,610	+		MPMX19_02657	0.84	-0.0
2,776,610	+		MPMX19_02657	0.84	-1.8
2,776,610	+		MPMX19_02657	0.84	-0.7
2,776,610	+		MPMX19_02657	0.84	-1.5
2,776,610	+		MPMX19_02657	0.84	-1.2
2,776,610	+		MPMX19_02657	0.84	-0.9
2,776,610	+		MPMX19_02657	0.84	-0.2
2,776,611	-		MPMX19_02657	0.84	-1.3
2,776,611	-		MPMX19_02657	0.84	-1.5
2,776,611	-		MPMX19_02657	0.84	+1.2
2,776,611	-		MPMX19_02657	0.84	-0.6
2,776,611	-		MPMX19_02657	0.84	-1.8
2,776,611	-		MPMX19_02657	0.84	-1.1
2,776,611	-		MPMX19_02657	0.84	-1.5
2,776,611	-		MPMX19_02657	0.84	-2.3
2,776,611	-		MPMX19_02657	0.84	-2.9
2,776,611	-		MPMX19_02657	0.84	-0.3
2,776,611	-		MPMX19_02657	0.84	-1.2
2,776,611	-		MPMX19_02657	0.84	-0.9
2,776,611	-		MPMX19_02657	0.84	-0.3
2,776,611	-		MPMX19_02657	0.84	-2.1
2,776,611	-		MPMX19_02657	0.84	-0.1
2,776,611	-		MPMX19_02657	0.84	-1.3
2,776,611	-		MPMX19_02657	0.84	-0.9
2,776,611	-		MPMX19_02657	0.84	-1.4
2,776,655	+		MPMX19_02657	0.85	-0.3
2,776,656	-		MPMX19_02657	0.85	-2.2
2,776,656	-		MPMX19_02657	0.85	-0.8
2,776,656	-		MPMX19_02657	0.85	+0.5
2,776,656	-		MPMX19_02657	0.85	-2.0
2,776,694	+		MPMX19_02657	0.86	-1.2
2,776,694	+		MPMX19_02657	0.86	+0.1
2,776,694	+		MPMX19_02657	0.86	-0.8
2,776,694	+		MPMX19_02657	0.86	-0.3
2,776,695	-		MPMX19_02657	0.86	-1.3
2,776,695	-		MPMX19_02657	0.86	+0.2
2,776,695	-		MPMX19_02657	0.86	-2.7
2,776,695	-		MPMX19_02657	0.86	-0.3
2,776,695	-		MPMX19_02657	0.86	+0.7
2,776,695	-		MPMX19_02657	0.86	+0.5
2,776,695	-		MPMX19_02657	0.86	-0.1
2,776,695	-		MPMX19_02657	0.86	-0.6
2,776,695	-		MPMX19_02657	0.86	-0.1
2,776,695	-		MPMX19_02657	0.86	-0.6
2,776,695	-		MPMX19_02657	0.86	-1.5
2,776,695	-		MPMX19_02657	0.86	-0.3
2,776,695	-		MPMX19_02657	0.86	-1.7
2,776,695	-		MPMX19_02657	0.86	-2.1
2,776,695	-		MPMX19_02657	0.86	-1.7
2,776,695	-		MPMX19_02657	0.86	-0.8
2,776,695	-		MPMX19_02657	0.86	-0.2
2,776,695	-		MPMX19_02657	0.86	+0.8
2,776,695	-		MPMX19_02657	0.86	-0.3
2,776,695	-		MPMX19_02657	0.86	-1.1
2,776,695	-		MPMX19_02657	0.86	-1.7
2,776,695	-		MPMX19_02657	0.86	-1.1
2,776,727	+		MPMX19_02657	0.87	-0.3
2,776,727	+		MPMX19_02657	0.87	-0.5
2,776,727	+		MPMX19_02657	0.87	-1.7
2,776,727	+		MPMX19_02657	0.87	+0.7
2,776,727	+		MPMX19_02657	0.87	-0.6
2,776,727	+		MPMX19_02657	0.87	-0.2
2,776,727	+		MPMX19_02657	0.87	-1.6
2,776,727	+		MPMX19_02657	0.87	+0.7
2,776,727	+		MPMX19_02657	0.87	-0.2
2,776,727	+		MPMX19_02657	0.87	+0.4
2,776,727	+		MPMX19_02657	0.87	-1.9
2,776,727	+		MPMX19_02657	0.87	-0.8
2,776,727	+		MPMX19_02657	0.87	+0.5
2,776,727	+		MPMX19_02657	0.87	-0.2
2,776,727	+		MPMX19_02657	0.87	-0.8
2,776,727	+		MPMX19_02657	0.87	+0.2
2,776,727	+		MPMX19_02657	0.87	+0.2
2,776,727	+		MPMX19_02657	0.87	-2.0
2,776,728	-		MPMX19_02657	0.87	-1.5
2,776,728	-		MPMX19_02657	0.87	-1.1
2,776,728	-		MPMX19_02657	0.87	-0.1
2,776,728	-		MPMX19_02657	0.87	-0.1
2,776,728	-		MPMX19_02657	0.87	-0.6
2,776,728	-		MPMX19_02657	0.87	-0.6
2,776,728	-		MPMX19_02657	0.87	-1.9
2,776,728	-		MPMX19_02657	0.87	+0.1
2,776,728	-		MPMX19_02657	0.87	-0.2
2,776,728	-		MPMX19_02657	0.87	-1.1
2,776,728	-		MPMX19_02657	0.87	+0.2
2,776,728	-		MPMX19_02657	0.87	-1.4
2,776,728	-		MPMX19_02657	0.87	-0.1
2,776,728	-		MPMX19_02657	0.87	-1.9
2,776,728	-		MPMX19_02657	0.87	-0.1
2,776,728	-		MPMX19_02657	0.87	-0.8
2,776,784	+		MPMX19_02657	0.88	-1.9
2,776,784	+		MPMX19_02657	0.88	-0.3
2,776,784	+		MPMX19_02657	0.88	-0.1
2,776,784	+		MPMX19_02657	0.88	-2.1
2,776,784	+		MPMX19_02657	0.88	-0.1
2,776,784	+		MPMX19_02657	0.88	-1.2
2,776,784	+		MPMX19_02657	0.88	-0.8
2,776,784	+		MPMX19_02657	0.88	-1.0
2,776,784	+		MPMX19_02657	0.88	+0.3
2,776,784	-		MPMX19_02657	0.88	+0.4
2,776,785	-		MPMX19_02657	0.88	-1.5
2,776,785	-		MPMX19_02657	0.88	-0.2
2,776,785	-		MPMX19_02657	0.88	-1.1
2,776,785	-		MPMX19_02657	0.88	-0.2
2,776,785	-		MPMX19_02657	0.88	+0.0
2,776,785	-		MPMX19_02657	0.88	-1.3
2,776,785	-		MPMX19_02657	0.88	-1.6
2,776,785	-		MPMX19_02657	0.88	+0.5
2,776,785	-		MPMX19_02657	0.88	-0.9
2,776,785	-		MPMX19_02657	0.88	-0.3
2,776,785	-		MPMX19_02657	0.88	-0.7
2,776,785	-		MPMX19_02657	0.88	-0.1
2,776,785	-		MPMX19_02657	0.88	-1.2
2,776,785	-		MPMX19_02657	0.88	-1.5
2,776,785	-		MPMX19_02657	0.88	-1.5
2,776,785	-		MPMX19_02657	0.88	-0.8
2,776,785	-		MPMX19_02657	0.88	-1.3
2,776,785	-		MPMX19_02657	0.88	-0.3
2,776,785	-		MPMX19_02657	0.88	-1.5
2,776,785	-		MPMX19_02657	0.88	-0.8
2,776,785	-		MPMX19_02657	0.88	-0.4
2,776,785	-		MPMX19_02657	0.88	-1.5
2,776,785	-		MPMX19_02657	0.88	-1.2
2,776,785	-		MPMX19_02657	0.88	-1.2
2,776,785	-		MPMX19_02657	0.88	-0.1
2,776,785	-		MPMX19_02657	0.88	-1.7
2,776,785	-		MPMX19_02657	0.88	-0.3
2,776,785	-		MPMX19_02657	0.88	-0.9
2,776,785	-		MPMX19_02657	0.88	-1.7
2,776,785	-		MPMX19_02657	0.88	-0.4
2,776,785	-		MPMX19_02657	0.88	-0.8
2,776,916	+				+1.0
2,776,917	-				-0.9
2,776,917	-				-0.6
2,776,917	-				-1.2
2,776,917	-				-0.7
2,776,917	-				-1.0
2,776,917	-				-0.1
2,776,917	-				-1.6
2,776,917	-				+1.1
2,776,917	-				+0.8
2,776,917	-				-0.7
2,776,917	-				-0.9
2,776,917	-				-1.1
2,776,917	-				-1.3
2,776,917	-				+0.2
2,776,917	-				-1.1
2,776,917	-				-1.0
2,776,917	-				-0.8
2,776,917	-				-1.0
2,776,917	-				-0.6
2,776,917	-				-2.1
2,776,917	-				-2.0
2,776,922	+				-0.2
2,776,922	+				-2.8
2,776,922	+				-2.9
2,776,922	+				-0.7
2,776,922	+				-0.9
2,776,922	+				-1.1
2,776,922	+				+1.0
2,776,922	+				-0.7
2,776,922	+				-1.1
2,776,923	-				+0.2
2,776,923	-				-2.2
2,776,923	-				-2.1
2,776,923	-				-0.6
2,776,923	-				-2.7
2,776,923	-				+0.7
2,776,923	-				-0.6
2,776,923	-				-1.5
2,776,923	-				-1.0
2,776,923	-				-1.8
2,776,923	-				+0.2
2,776,923	-				-2.0
2,776,923	-				-1.2
2,776,923	-				+0.1
2,776,923	-				-1.0
2,776,923	-				-0.1
2,776,923	-				+0.1
2,776,923	-				-1.7
2,776,923	-				-1.8
2,776,923	-				-1.7
2,776,925	+				-0.3
2,776,926	-				-1.2
2,776,926	-				-1.2
2,777,255	+				-1.6
2,777,255	+				+0.3
2,777,255	+				-0.8
2,777,255	+				-1.8
2,777,255	+				-0.1
2,777,255	+				+0.0
2,777,256	-				-0.3
2,777,399	+				-0.2
2,777,400	-				-0.6
2,777,400	-				-0.3
2,777,435	+				-0.3
2,777,435	+				-2.5
2,777,436	-				-0.3
2,777,436	-				-0.9
2,777,436	-				+0.4
2,777,480	+				-1.0
2,777,480	+				-1.2
2,777,481	-				-1.8
2,777,698	-		MPMX19_02658	0.18	-1.7
2,777,922	-		MPMX19_02658	0.34	-0.1
2,778,042	-		MPMX19_02658	0.42	-2.1
2,778,042	-		MPMX19_02658	0.42	+0.8
2,778,042	-		MPMX19_02658	0.42	-1.8
2,778,042	-		MPMX19_02658	0.42	-1.7
2,778,042	-		MPMX19_02658	0.42	-0.3
2,778,042	-		MPMX19_02658	0.42	-1.4
2,778,042	-		MPMX19_02658	0.42	-1.3
2,778,042	-		MPMX19_02658	0.42	+0.0
2,778,042	-		MPMX19_02658	0.42	-0.7
2,778,042	-		MPMX19_02658	0.42	+0.7
2,778,042	-		MPMX19_02658	0.42	-1.6
2,778,042	-		MPMX19_02658	0.42	+0.7
2,778,042	-		MPMX19_02658	0.42	-2.1
2,778,042	-		MPMX19_02658	0.42	+0.2
2,778,042	-		MPMX19_02658	0.42	-0.6
2,778,090	-		MPMX19_02658	0.45	-1.1
2,778,090	-		MPMX19_02658	0.45	-1.7
2,778,090	-		MPMX19_02658	0.45	-1.0
2,778,090	-		MPMX19_02658	0.45	+0.2
2,778,090	-		MPMX19_02658	0.45	-0.3
2,778,090	-		MPMX19_02658	0.45	+1.2
2,778,152	+		MPMX19_02658	0.50	-1.2
2,778,152	+		MPMX19_02658	0.50	-1.3
2,778,153	-		MPMX19_02658	0.50	-0.2
2,778,153	-		MPMX19_02658	0.50	+1.5
2,778,153	-		MPMX19_02658	0.50	-1.0
2,778,153	-		MPMX19_02658	0.50	-0.5
2,778,317	+		MPMX19_02658	0.61	+0.5
2,778,317	+		MPMX19_02658	0.61	-1.3
2,778,317	+		MPMX19_02658	0.61	-0.9
2,778,317	+		MPMX19_02658	0.61	+1.4
2,778,317	+		MPMX19_02658	0.61	-1.0
2,778,318	-		MPMX19_02658	0.61	-0.1
2,778,318	-		MPMX19_02658	0.61	-0.9
2,778,353	+		MPMX19_02658	0.63	-1.8
2,778,353	+		MPMX19_02658	0.63	-1.1
2,778,353	+		MPMX19_02658	0.63	-0.7
2,778,353	+		MPMX19_02658	0.63	-0.3
2,778,353	+		MPMX19_02658	0.63	+0.2
2,778,353	+		MPMX19_02658	0.63	-0.1
2,778,353	+		MPMX19_02658	0.63	-1.1
2,778,353	+		MPMX19_02658	0.63	-0.3
2,778,353	+		MPMX19_02658	0.63	-0.1
2,778,353	+		MPMX19_02658	0.63	-1.3
2,778,353	+		MPMX19_02658	0.63	-1.8
2,778,354	-		MPMX19_02658	0.63	-0.1
2,778,354	-		MPMX19_02658	0.63	+0.2
2,778,354	-		MPMX19_02658	0.63	+0.7
2,778,354	-		MPMX19_02658	0.63	-1.2
2,778,354	-		MPMX19_02658	0.63	-2.7
2,778,354	-		MPMX19_02658	0.63	+1.6
2,778,354	-		MPMX19_02658	0.63	-1.3
2,778,354	-		MPMX19_02658	0.63	+0.1
2,778,354	-		MPMX19_02658	0.63	+1.0
2,778,354	-		MPMX19_02658	0.63	-0.8
2,778,354	-		MPMX19_02658	0.63	-0.8
2,778,354	-		MPMX19_02658	0.63	+0.1
2,778,368	+		MPMX19_02658	0.64	-1.9
2,778,368	+		MPMX19_02658	0.64	-0.8
2,778,369	-		MPMX19_02658	0.65	-2.0
2,778,369	-		MPMX19_02658	0.65	-1.3
2,778,369	-		MPMX19_02658	0.65	-0.3
2,778,369	-		MPMX19_02658	0.65	-1.7
2,778,369	-		MPMX19_02658	0.65	-1.1
2,778,503	+		MPMX19_02658	0.74	-0.6
2,778,503	+		MPMX19_02658	0.74	-1.7
2,778,503	+		MPMX19_02658	0.74	-2.6
2,778,503	+		MPMX19_02658	0.74	-2.1
2,778,503	+		MPMX19_02658	0.74	-0.3
2,778,503	+		MPMX19_02658	0.74	+0.4
2,778,503	+		MPMX19_02658	0.74	-1.9
2,778,503	+		MPMX19_02658	0.74	-1.8
2,778,503	+		MPMX19_02658	0.74	+0.4
2,778,503	+		MPMX19_02658	0.74	+0.2
2,778,503	+		MPMX19_02658	0.74	-0.5
2,778,503	+		MPMX19_02658	0.74	+0.5
2,778,503	+		MPMX19_02658	0.74	-1.2
2,778,503	+		MPMX19_02658	0.74	+0.4
2,778,503	+		MPMX19_02658	0.74	-1.9
2,778,503	+		MPMX19_02658	0.74	-0.3
2,778,503	+		MPMX19_02658	0.74	-0.8
2,778,503	+		MPMX19_02658	0.74	-0.8
2,778,503	+		MPMX19_02658	0.74	+0.8
2,778,504	-		MPMX19_02658	0.74	-1.5
2,778,504	-		MPMX19_02658	0.74	-0.5
2,778,504	-		MPMX19_02658	0.74	-0.8
2,778,504	-		MPMX19_02658	0.74	-0.9
2,778,504	-		MPMX19_02658	0.74	-0.8
2,778,504	-		MPMX19_02658	0.74	-1.1
2,778,504	-		MPMX19_02658	0.74	-0.9
2,778,504	-		MPMX19_02658	0.74	-1.0
2,778,504	-		MPMX19_02658	0.74	-0.7
2,778,504	-		MPMX19_02658	0.74	-1.6
2,778,504	-		MPMX19_02658	0.74	-1.1
2,778,504	-		MPMX19_02658	0.74	-0.8
2,778,504	-		MPMX19_02658	0.74	-0.5
2,778,504	-		MPMX19_02658	0.74	-1.1
2,778,504	-		MPMX19_02658	0.74	-1.3
2,778,504	-		MPMX19_02658	0.74	-1.2
2,778,504	-		MPMX19_02658	0.74	-2.2
2,778,504	-		MPMX19_02658	0.74	-0.1
2,778,504	-		MPMX19_02658	0.74	+1.2
2,778,504	-		MPMX19_02658	0.74	-1.8
2,778,504	-		MPMX19_02658	0.74	+0.8
2,778,504	-		MPMX19_02658	0.74	-1.6
2,778,638	+		MPMX19_02658	0.83	-0.4
2,778,638	+		MPMX19_02658	0.83	+0.7
2,778,638	+		MPMX19_02658	0.83	-1.8
2,778,638	+		MPMX19_02658	0.83	-2.1
2,778,638	+		MPMX19_02658	0.83	-0.3
2,778,638	+		MPMX19_02658	0.83	-0.1
2,778,638	+		MPMX19_02658	0.83	-1.0
2,778,638	+		MPMX19_02658	0.83	-2.8
2,778,638	+		MPMX19_02658	0.83	-0.2
2,778,638	+		MPMX19_02658	0.83	-2.1
2,778,639	-		MPMX19_02658	0.83	-1.5
2,778,639	-		MPMX19_02658	0.83	-0.9
2,778,639	-		MPMX19_02658	0.83	-0.6
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	+0.4
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	-1.7
2,778,639	-		MPMX19_02658	0.83	-0.3
2,778,639	-		MPMX19_02658	0.83	-0.9
2,778,639	-		MPMX19_02658	0.83	-0.9
2,778,639	-		MPMX19_02658	0.83	+0.2
2,778,639	-		MPMX19_02658	0.83	-0.8
2,778,639	-		MPMX19_02658	0.83	-1.2
2,778,639	-		MPMX19_02658	0.83	-0.8
2,778,639	-		MPMX19_02658	0.83	-0.8
2,778,639	-		MPMX19_02658	0.83	-1.6
2,778,639	-		MPMX19_02658	0.83	-1.2
2,778,639	-		MPMX19_02658	0.83	-1.9
2,778,639	-		MPMX19_02658	0.83	-1.3
2,778,639	-		MPMX19_02658	0.83	-2.5
2,778,639	-		MPMX19_02658	0.83	+0.6
2,778,639	-		MPMX19_02658	0.83	-2.5
2,778,639	-		MPMX19_02658	0.83	+0.4
2,778,639	-		MPMX19_02658	0.83	-2.3
2,778,639	-		MPMX19_02658	0.83	-0.2
2,778,639	-		MPMX19_02658	0.83	+1.4
2,778,785	+				-0.1
2,778,785	+				-1.0
2,778,785	+				-0.1
2,778,785	+				-1.2
2,778,785	+				-1.8
2,778,785	+				-0.5
2,778,785	+				-2.3
2,778,785	+				-0.8
2,778,785	+				-0.9
2,778,785	+				-2.1
2,778,786	-				-1.9
2,778,786	-				-1.7
2,778,786	-				-1.2
2,778,786	-				-1.3
2,778,786	-				-1.3
2,778,968	+				-1.1
2,778,968	+				-0.8
2,778,968	+				-0.8
2,778,969	-				-1.6
2,778,969	-				-0.1
2,778,969	-				-1.1
2,779,023	+				+0.4
2,779,023	+				-1.7
2,779,023	+				-2.8
2,779,023	+				-1.3
2,779,023	+				-0.0
2,779,024	-				-0.3
2,779,024	-				+0.9
2,779,024	-				+1.1
2,779,024	-				+0.2
2,779,024	-				-1.4
2,779,024	-				-0.2
2,779,025	+				-1.2
2,779,025	+				-2.1
2,779,025	+				-0.8
2,779,025	+				-1.8
2,779,026	-				-1.7
2,779,026	-				-2.1
2,779,026	-				-1.7
2,779,066	-				+0.8
2,779,066	-				-0.2
2,779,102	+				-0.5
2,779,131	+				+0.8
2,779,179	-				+0.0
2,779,179	-				+0.4
2,779,224	+				-1.1
2,779,224	+				+0.5
2,779,224	+				-0.9
2,779,224	+				-0.6
2,779,224	+				-1.5
2,779,224	+				+0.4
2,779,224	+				+0.4
2,779,224	+				-0.3
2,779,224	+				-1.4
2,779,224	+				-0.7
2,779,224	+				+0.7
2,779,224	+				-0.1
2,779,224	+				-2.3
2,779,224	+				-0.1
2,779,224	+				-0.8
2,779,225	-				+1.0
2,779,225	-				-0.3
2,779,225	-				+0.2
2,779,225	-				+0.1
2,779,225	-				-1.1
2,779,225	-				-0.9
2,779,225	-				+0.3
2,779,225	-				-0.6
2,779,225	-				-1.6
2,779,225	-				-0.4
2,779,225	-				-0.1
2,779,225	-				-0.3
2,779,225	-				-1.1
2,779,225	-				+0.8
2,779,226	+				-0.1
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2,779,226	+				-1.2
2,779,226	+				-0.8
2,779,226	+				-0.8
2,779,226	+				+0.7
2,779,227	-				-1.1
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2,779,283	+				+0.4
2,779,283	+				-0.1
2,779,283	+				-0.9
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2,779,283	+				-1.8
2,779,284	-				-0.9
2,779,454	+		MPMX19_02659	0.23	+0.2
2,779,454	+		MPMX19_02659	0.23	+1.0
2,779,454	+		MPMX19_02659	0.23	-0.5
2,779,454	+		MPMX19_02659	0.23	-0.9
2,779,454	+		MPMX19_02659	0.23	+0.0
2,779,454	+		MPMX19_02659	0.23	+0.8
2,779,454	+		MPMX19_02659	0.23	-0.5
2,779,454	+		MPMX19_02659	0.23	-0.3
2,779,454	+		MPMX19_02659	0.23	-1.3
2,779,454	+		MPMX19_02659	0.23	+1.2
2,779,454	+		MPMX19_02659	0.23	-0.8
2,779,455	-		MPMX19_02659	0.23	-0.3
2,779,455	-		MPMX19_02659	0.23	-0.7
2,779,455	-		MPMX19_02659	0.23	-0.1
2,779,679	+		MPMX19_02659	0.51	-0.3
2,779,871	+		MPMX19_02659	0.75	+0.0
2,779,871	+		MPMX19_02659	0.75	-0.9
2,779,872	-		MPMX19_02659	0.75	+0.8
2,779,872	-		MPMX19_02659	0.75	+0.1
2,779,880	+		MPMX19_02659	0.76	-0.9
2,779,880	+		MPMX19_02659	0.76	-0.3
2,779,880	+		MPMX19_02659	0.76	-0.3
2,779,880	+		MPMX19_02659	0.76	-1.2
2,779,881	-		MPMX19_02659	0.77	-0.7
2,779,881	-		MPMX19_02659	0.77	-0.2
2,779,881	-		MPMX19_02659	0.77	-1.3