Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02615

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,730,283	-		MPMX19_02614	0.52	+0.7
2,730,540	+		MPMX19_02614	0.66	-1.7
2,730,540	+		MPMX19_02614	0.66	-1.3
2,730,540	+		MPMX19_02614	0.66	-0.5
2,730,540	+		MPMX19_02614	0.66	-1.0
2,730,540	+		MPMX19_02614	0.66	-0.2
2,730,540	+		MPMX19_02614	0.66	-0.1
2,730,540	+		MPMX19_02614	0.66	-1.0
2,730,541	-		MPMX19_02614	0.66	-1.8
2,730,541	-		MPMX19_02614	0.66	+0.0
2,730,541	-		MPMX19_02614	0.66	+0.4
2,730,541	-		MPMX19_02614	0.66	+0.7
2,730,541	-		MPMX19_02614	0.66	-0.6
2,730,541	-		MPMX19_02614	0.66	-0.6
2,730,541	-		MPMX19_02614	0.66	+0.8
2,731,196	+				-0.2
2,731,196	+				-0.3
2,731,196	+				-1.1
2,731,280	+		MPMX19_02615	0.11	+0.3
2,731,280	+		MPMX19_02615	0.11	+0.1
2,731,280	+		MPMX19_02615	0.11	-0.6
2,731,280	+		MPMX19_02615	0.11	+2.2
2,731,280	+		MPMX19_02615	0.11	-1.6
2,731,281	-		MPMX19_02615	0.11	-1.2
2,731,281	-		MPMX19_02615	0.11	-0.0
2,731,281	-		MPMX19_02615	0.11	+1.2
2,731,281	-		MPMX19_02615	0.11	+0.2
2,731,281	-		MPMX19_02615	0.11	-1.2
2,731,281	-		MPMX19_02615	0.11	-1.4
2,731,281	-		MPMX19_02615	0.11	+0.2
2,731,337	+		MPMX19_02615	0.18	-0.6
2,731,454	+		MPMX19_02615	0.33	-1.9
2,731,454	+		MPMX19_02615	0.33	+0.4
2,731,604	+		MPMX19_02615	0.52	+0.7
2,731,604	+		MPMX19_02615	0.52	+0.5
2,731,604	+		MPMX19_02615	0.52	-0.2
2,731,604	+		MPMX19_02615	0.52	+0.6
2,731,604	+		MPMX19_02615	0.52	-1.0
2,731,604	+		MPMX19_02615	0.52	+0.2
2,731,605	-		MPMX19_02615	0.52	+0.9
2,731,605	-		MPMX19_02615	0.52	-0.3
2,731,605	-		MPMX19_02615	0.52	+0.8
2,731,605	-		MPMX19_02615	0.52	-1.5
2,731,605	-		MPMX19_02615	0.52	-0.7
2,731,605	-		MPMX19_02615	0.52	-2.2
2,731,605	-		MPMX19_02615	0.52	-0.6
2,731,715	+		MPMX19_02615	0.66	-0.3
2,731,715	+		MPMX19_02615	0.66	-0.9
2,731,715	+		MPMX19_02615	0.66	-0.1
2,731,715	+		MPMX19_02615	0.66	-0.7
2,731,715	+		MPMX19_02615	0.66	+0.5
2,731,715	+		MPMX19_02615	0.66	-1.3
2,731,715	+		MPMX19_02615	0.66	+0.6
2,731,715	+		MPMX19_02615	0.66	+0.5
2,731,715	+		MPMX19_02615	0.66	+0.1
2,731,715	+		MPMX19_02615	0.66	-0.8
2,731,715	+		MPMX19_02615	0.66	-0.3
2,731,716	-		MPMX19_02615	0.67	-2.0
2,731,716	-		MPMX19_02615	0.67	-1.3
2,731,716	-		MPMX19_02615	0.67	+1.2
2,731,716	-		MPMX19_02615	0.67	-0.1
2,731,716	-		MPMX19_02615	0.67	-0.8
2,731,716	-		MPMX19_02615	0.67	-1.6
2,731,716	-		MPMX19_02615	0.67	-2.2
2,731,716	-		MPMX19_02615	0.67	-1.3
2,731,716	-		MPMX19_02615	0.67	-0.7
2,731,716	-		MPMX19_02615	0.67	+0.7
2,731,716	-		MPMX19_02615	0.67	-0.1
2,732,020	+				+0.5
2,732,020	+				-0.3
2,732,020	+				-1.5
2,732,021	-				+1.4
2,732,021	-				+0.1
2,732,021	-				+1.2
2,732,021	-				-1.8
2,732,031	-				-0.1
2,732,031	-				-1.9
2,732,031	-				+0.4
2,732,095	+				+0.2
2,732,095	+				+0.7
2,732,095	+				-1.0
2,732,096	-				-0.9
2,732,096	-				+0.2
2,732,096	-				-0.4
2,732,223	+				-1.5
2,732,229	+				+0.1
2,732,229	+				-2.0
2,732,229	+				+0.4
2,732,229	+				+0.2
2,732,229	+				-1.2
2,732,229	+				+0.9
2,732,229	+				-1.7
2,732,229	+				-0.5
2,732,229	+				-1.3
2,732,229	+				+1.1
2,732,229	+				-0.2
2,732,229	+				+0.3
2,732,229	+				-0.6
2,732,229	+				+1.7
2,732,229	+				+1.8
2,732,229	+				-0.5
2,732,229	+				+0.7
2,732,229	+				-0.6
2,732,229	+				+0.8
2,732,229	+				-0.6
2,732,229	+				-0.0
2,732,230	-				+0.8
2,732,230	-				+0.2
2,732,230	-				-0.1
2,732,230	-				-0.0
2,732,230	-				+1.0
2,732,230	-				-1.4
2,732,230	-				+0.2
2,732,230	-				-0.3
2,732,230	-				+0.1
2,732,230	-				-0.7
2,732,230	-				+0.2
2,732,230	-				-1.5
2,732,247	+				+0.1
2,732,247	+				+0.3
2,732,248	-				-1.2
2,732,248	-				-0.8
2,732,248	-				-0.1
2,732,248	-				+0.4
2,732,248	-				-1.3
2,732,248	-				-0.3
2,732,484	+		MPMX19_02616	0.12	+0.7
2,732,485	-		MPMX19_02616	0.12	-0.1
2,732,485	-		MPMX19_02616	0.12	-0.3
2,732,496	+		MPMX19_02616	0.12	-0.8
2,732,496	+		MPMX19_02616	0.12	-0.3
2,732,497	-		MPMX19_02616	0.12	+0.8
2,732,634	+		MPMX19_02616	0.20	-1.1
2,732,634	+		MPMX19_02616	0.20	-1.6
2,732,634	+		MPMX19_02616	0.20	-0.5
2,732,634	+		MPMX19_02616	0.20	+0.2
2,732,634	+		MPMX19_02616	0.20	+0.2
2,732,634	+		MPMX19_02616	0.20	-0.5
2,732,634	+		MPMX19_02616	0.20	-0.7
2,732,634	+		MPMX19_02616	0.20	+1.1
2,732,634	+		MPMX19_02616	0.20	+0.5
2,732,635	-		MPMX19_02616	0.20	+0.5
2,732,635	-		MPMX19_02616	0.20	-1.9
2,732,635	-		MPMX19_02616	0.20	+0.5
2,732,635	-		MPMX19_02616	0.20	-0.2
2,732,635	-		MPMX19_02616	0.20	-0.0
2,732,635	-		MPMX19_02616	0.20	-0.1
2,732,635	-		MPMX19_02616	0.20	-1.5
2,732,635	-		MPMX19_02616	0.20	-1.8
2,732,688	+		MPMX19_02616	0.23	+0.3
2,732,688	+		MPMX19_02616	0.23	-0.4
2,732,688	+		MPMX19_02616	0.23	-2.5
2,732,703	+		MPMX19_02616	0.24	-0.8
2,732,703	+		MPMX19_02616	0.24	+0.8
2,732,703	+		MPMX19_02616	0.24	-1.1
2,732,703	+		MPMX19_02616	0.24	-0.1
2,732,703	+		MPMX19_02616	0.24	-0.5
2,732,704	-		MPMX19_02616	0.24	+0.0
2,732,704	-		MPMX19_02616	0.24	-0.6
2,732,799	+		MPMX19_02616	0.29	+0.2
2,732,799	+		MPMX19_02616	0.29	+0.2
2,732,799	+		MPMX19_02616	0.29	-1.6
2,732,799	+		MPMX19_02616	0.29	+1.7
2,732,799	+		MPMX19_02616	0.29	+0.5
2,732,800	-		MPMX19_02616	0.29	+0.8
2,732,800	-		MPMX19_02616	0.29	+1.6
2,732,800	-		MPMX19_02616	0.29	-0.1
2,732,820	+		MPMX19_02616	0.30	-0.7
2,732,820	+		MPMX19_02616	0.30	-0.2
2,732,820	+		MPMX19_02616	0.30	-0.8
2,732,820	+		MPMX19_02616	0.30	-0.1
2,732,820	+		MPMX19_02616	0.30	-0.8
2,732,820	+		MPMX19_02616	0.30	-0.9
2,732,820	+		MPMX19_02616	0.30	-1.8
2,732,820	+		MPMX19_02616	0.30	+0.1
2,732,820	+		MPMX19_02616	0.30	-1.2
2,732,820	+		MPMX19_02616	0.30	+0.9
2,732,820	+		MPMX19_02616	0.30	+0.2
2,732,820	+		MPMX19_02616	0.30	-1.0
2,732,821	-		MPMX19_02616	0.30	-0.3
2,732,821	-		MPMX19_02616	0.30	-1.5
2,732,821	-		MPMX19_02616	0.30	+0.5
2,732,821	-		MPMX19_02616	0.30	+0.9
2,732,821	-		MPMX19_02616	0.30	+0.5
2,732,821	-		MPMX19_02616	0.30	-0.4
2,732,821	-		MPMX19_02616	0.30	-1.8
2,732,821	-		MPMX19_02616	0.30	-1.3
2,732,821	-		MPMX19_02616	0.30	-1.5
2,732,821	-		MPMX19_02616	0.30	-1.1