Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02613

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,728,207	+				-0.8
2,728,207	+				-1.2
2,728,208	-				-1.1
2,728,208	-				+0.2
2,728,208	-				-0.0
2,728,208	-				+0.2
2,728,316	+				+0.1
2,728,316	+				-0.5
2,728,317	-				-0.8
2,728,317	-				-0.4
2,728,317	-				-1.0
2,728,317	-				-0.1
2,728,317	-				-0.8
2,728,317	-				-1.7
2,728,367	+				-0.1
2,728,367	+				-0.8
2,728,414	-		MPMX19_02612	0.16	+2.2
2,728,669	-		MPMX19_02612	0.73	-1.5
2,728,826	+				-1.2
2,728,826	+				+0.2
2,728,826	+				+0.8
2,728,826	+				-0.1
2,728,826	+				+0.3
2,728,827	-				-0.1
2,728,827	-				-1.3
2,728,827	-				-0.5
2,728,827	-				-1.1
2,728,857	+				-1.5
2,729,011	+		MPMX19_02613	0.30	+0.7
2,729,012	-		MPMX19_02613	0.30	-1.3
2,729,012	-		MPMX19_02613	0.30	-1.9
2,729,012	-		MPMX19_02613	0.30	+0.7
2,729,012	-		MPMX19_02613	0.30	-0.9
2,729,107	+		MPMX19_02613	0.70	-1.0
2,729,108	-		MPMX19_02613	0.70	-1.2
2,729,325	+				-0.9
2,729,325	+				-1.7
2,729,325	+				-1.8
2,729,325	+				+0.1
2,729,326	-				-0.9
2,729,327	+				-1.9
2,729,327	+				-0.6
2,729,327	+				+0.1
2,729,327	+				+0.2
2,729,327	+				-1.1
2,729,327	+				-0.1
2,729,327	+				-0.7
2,729,327	+				-0.3
2,729,328	-				-0.0
2,729,328	-				-1.8
2,729,328	-				-0.3
2,729,328	-				+0.2
2,729,328	-				-0.6
2,729,328	-				-0.9
2,729,328	-				-0.4
2,729,328	-				-0.8
2,729,346	+				+0.2
2,729,346	+				-0.8
2,729,346	+				-1.2
2,729,346	+				-0.7
2,729,346	+				-0.7
2,729,346	+				-0.3
2,729,347	-				+0.7
2,729,347	-				+1.0
2,729,347	-				-1.5
2,729,455	+				+0.0
2,729,455	+				+0.2
2,729,482	+				+0.1
2,729,483	-				-0.3
2,730,010	+		MPMX19_02614	0.37	-0.8
2,730,011	-		MPMX19_02614	0.37	-0.3
2,730,011	-		MPMX19_02614	0.37	-0.3
2,730,011	-		MPMX19_02614	0.37	+0.8
2,730,011	-		MPMX19_02614	0.37	-0.3
2,730,011	-		MPMX19_02614	0.37	-0.6
2,730,011	-		MPMX19_02614	0.37	+0.7