Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02548

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,663,309	+		MPMX19_02547	0.52	-0.5
2,663,309	+		MPMX19_02547	0.52	-0.2
2,663,309	+		MPMX19_02547	0.52	+0.2
2,663,309	+		MPMX19_02547	0.52	+0.9
2,663,309	+		MPMX19_02547	0.52	-1.7
2,663,309	+		MPMX19_02547	0.52	-0.1
2,663,309	+		MPMX19_02547	0.52	-1.8
2,663,310	-		MPMX19_02547	0.52	-0.1
2,663,310	-		MPMX19_02547	0.52	+1.2
2,663,310	-		MPMX19_02547	0.52	-0.6
2,663,310	-		MPMX19_02547	0.52	-0.5
2,663,911	+				-0.2
2,663,911	+				+1.5
2,663,911	+				-0.3
2,663,911	+				+0.2
2,663,911	+				+0.1
2,663,911	+				-0.8
2,663,912	-				-1.7
2,663,912	-				-0.8
2,663,912	-				-0.6
2,663,912	-				+0.4
2,663,912	-				+0.8
2,663,912	-				-1.2
2,663,912	-				-0.8
2,663,912	-				-0.8
2,664,001	+				-0.3
2,664,001	+				-0.3
2,664,001	+				-1.4
2,664,001	+				-1.0
2,664,001	+				-0.3
2,664,001	+				-0.9
2,664,001	+				-1.7
2,664,002	-				-2.5
2,664,002	-				-0.6
2,664,002	-				+1.1
2,664,002	-				+0.2
2,664,002	-				+0.3
2,664,002	-				-1.6
2,664,032	+				-1.8
2,664,032	+				+0.5
2,664,032	+				-0.1
2,664,032	+				+0.4
2,664,032	+				-0.6
2,664,032	+				-0.6
2,664,032	+				-0.3
2,664,032	+				+0.1
2,664,032	+				-0.5
2,664,032	+				-0.2
2,664,032	+				+0.7
2,664,032	+				-1.2
2,664,032	+				-0.9
2,664,032	+				-0.3
2,664,032	+				-0.2
2,664,032	+				-0.3
2,664,032	+				-0.8
2,664,032	+				+1.1
2,664,032	+				-0.6
2,664,032	+				+1.2
2,664,032	+				-0.9
2,664,032	+				-1.6
2,664,032	+				-0.5
2,664,032	+				-0.6
2,664,032	+				+0.3
2,664,033	-				-1.5
2,664,033	-				-0.4
2,664,033	-				-2.0
2,664,033	-				-0.9
2,664,033	-				-1.3
2,664,033	-				-2.4
2,664,033	-				-1.1
2,664,033	-				+0.4
2,664,033	-				-0.7
2,664,033	-				+0.1
2,664,033	-				+0.7
2,664,033	-				+0.7
2,664,033	-				-2.0
2,664,033	-				+0.3
2,664,033	-				-0.0
2,664,033	-				-1.9
2,664,033	-				-0.2
2,664,033	-				-1.4
2,664,033	-				+0.7
2,664,033	-				-0.2
2,664,033	-				+0.7
2,664,033	-				+1.9
2,664,033	-				+0.1
2,664,144	+				-1.6
2,664,144	+				-1.1
2,664,144	+				+0.4
2,664,144	+				-1.5
2,664,144	+				-1.0
2,664,144	+				-2.3
2,664,144	+				-2.3
2,664,144	+				-1.1
2,664,144	+				-0.8
2,664,144	+				+0.8
2,664,144	+				-0.3
2,664,144	+				-0.8
2,664,144	+				+0.4
2,664,144	+				-0.3
2,664,145	-				+0.7
2,664,145	-				-0.1
2,664,145	-				-1.1
2,664,145	-				+0.4
2,664,145	-				+1.0
2,664,145	-				+0.1
2,664,145	-				+0.4
2,664,145	-				-0.3
2,664,145	-				-0.5
2,664,145	-				+1.2
2,664,145	-				-1.2
2,664,145	-				-1.1
2,664,145	-				-0.8
2,664,145	-				+0.2
2,664,145	-				-1.3
2,664,145	-				-0.6
2,664,145	-				-0.8
2,664,145	-				+0.8
2,664,145	-				+0.3
2,664,384	+		MPMX19_02548	0.44	+0.7
2,664,384	+		MPMX19_02548	0.44	+0.9
2,664,385	-		MPMX19_02548	0.44	+0.1
2,664,444	+		MPMX19_02548	0.54	-1.2
2,664,444	+		MPMX19_02548	0.54	+0.3
2,664,444	+		MPMX19_02548	0.54	-0.8
2,664,445	-		MPMX19_02548	0.54	-0.8
2,664,445	-		MPMX19_02548	0.54	+0.7
2,664,567	+		MPMX19_02548	0.76	+0.4
2,664,567	+		MPMX19_02548	0.76	-1.2
2,664,567	+		MPMX19_02548	0.76	-0.3
2,664,567	+		MPMX19_02548	0.76	-0.4
2,664,567	+		MPMX19_02548	0.76	+0.7
2,664,567	+		MPMX19_02548	0.76	+0.7
2,664,567	+		MPMX19_02548	0.76	+0.9
2,664,568	-		MPMX19_02548	0.76	-0.3
2,664,568	-		MPMX19_02548	0.76	-0.4
2,664,568	-		MPMX19_02548	0.76	+1.7
2,664,568	-		MPMX19_02548	0.76	+0.7
2,664,568	-		MPMX19_02548	0.76	+0.1
2,664,568	-		MPMX19_02548	0.76	-0.8
2,664,568	-		MPMX19_02548	0.76	-2.1
2,664,568	-		MPMX19_02548	0.76	-0.6
2,664,568	-		MPMX19_02548	0.76	-0.3
2,664,568	-		MPMX19_02548	0.76	-0.2
2,664,568	-		MPMX19_02548	0.76	+0.2
2,664,568	-		MPMX19_02548	0.76	-0.7
2,664,568	-		MPMX19_02548	0.76	+0.5
2,664,568	-		MPMX19_02548	0.76	-0.6
2,664,666	+				-1.1
2,664,666	+				+0.7
2,664,667	-				+0.4
2,664,667	-				-0.9
2,664,667	-				+0.5
2,664,667	-				-1.5
2,664,667	-				-0.9
2,664,667	-				+0.0
2,664,667	-				+0.0
2,664,667	-				-1.6
2,664,785	+				-0.2
2,664,785	+				-1.6
2,664,785	+				-1.3
2,664,785	+				+0.3
2,664,785	+				+0.7
2,664,785	+				+0.3
2,664,786	-				+0.2
2,664,786	-				-0.2
2,664,786	-				-0.2
2,664,786	-				+0.7
2,664,786	-				-1.1
2,664,786	-				+1.0
2,664,786	-				-1.5
2,664,786	-				-2.1
2,665,010	+		MPMX19_02549	0.22	-0.8
2,665,010	+		MPMX19_02549	0.22	+0.8
2,665,010	+		MPMX19_02549	0.22	-0.5
2,665,010	+		MPMX19_02549	0.22	-0.3
2,665,010	+		MPMX19_02549	0.22	-0.7
2,665,010	+		MPMX19_02549	0.22	-2.0
2,665,011	-		MPMX19_02549	0.23	-0.6
2,665,011	-		MPMX19_02549	0.23	+1.2
2,665,011	-		MPMX19_02549	0.23	-0.1
2,665,011	-		MPMX19_02549	0.23	-0.7
2,665,011	-		MPMX19_02549	0.23	+0.7
2,665,011	-		MPMX19_02549	0.23	-1.3
2,665,011	-		MPMX19_02549	0.23	-0.3
2,665,011	-		MPMX19_02549	0.23	-0.3
2,665,011	-		MPMX19_02549	0.23	-0.6
2,665,011	-		MPMX19_02549	0.23	-1.2
2,665,011	-		MPMX19_02549	0.23	-1.8