Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02538

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,656,047	+		MPMX19_02537	0.11	-1.2
2,656,047	+		MPMX19_02537	0.11	-1.2
2,656,047	+		MPMX19_02537	0.11	-0.3
2,656,047	+		MPMX19_02537	0.11	-0.3
2,656,047	+		MPMX19_02537	0.11	-1.3
2,656,047	+		MPMX19_02537	0.11	-1.3
2,656,047	+		MPMX19_02537	0.11	+1.2
2,656,047	+		MPMX19_02537	0.11	-0.9
2,656,047	+		MPMX19_02537	0.11	-1.0
2,656,047	+		MPMX19_02537	0.11	-0.3
2,656,047	+		MPMX19_02537	0.11	-1.3
2,656,047	+		MPMX19_02537	0.11	-0.9
2,656,047	+		MPMX19_02537	0.11	-0.6
2,656,047	+		MPMX19_02537	0.11	-0.3
2,656,048	-		MPMX19_02537	0.11	-0.4
2,656,048	-		MPMX19_02537	0.11	-1.1
2,656,048	-		MPMX19_02537	0.11	+0.4
2,656,048	-		MPMX19_02537	0.11	+0.8
2,656,068	+		MPMX19_02537	0.13	-0.9
2,656,068	+		MPMX19_02537	0.13	-0.5
2,656,068	+		MPMX19_02537	0.13	-1.1
2,656,068	+		MPMX19_02537	0.13	-1.1
2,656,068	+		MPMX19_02537	0.13	-0.3
2,656,068	+		MPMX19_02537	0.13	-0.8
2,656,068	+		MPMX19_02537	0.13	-0.1
2,656,068	+		MPMX19_02537	0.13	+0.7
2,656,068	+		MPMX19_02537	0.13	-0.7
2,656,068	+		MPMX19_02537	0.13	-1.3
2,656,068	+		MPMX19_02537	0.13	-1.6
2,656,069	-		MPMX19_02537	0.13	+2.0
2,656,069	-		MPMX19_02537	0.13	+0.5
2,656,069	-		MPMX19_02537	0.13	-0.6
2,656,069	-		MPMX19_02537	0.13	-0.2
2,656,069	-		MPMX19_02537	0.13	+0.2
2,656,069	-		MPMX19_02537	0.13	+0.8
2,656,069	-		MPMX19_02537	0.13	+1.8
2,656,069	-		MPMX19_02537	0.13	-0.6
2,656,069	-		MPMX19_02537	0.13	+0.5
2,656,069	-		MPMX19_02537	0.13	-0.4
2,656,074	+		MPMX19_02537	0.14	-1.2
2,656,074	+		MPMX19_02537	0.14	-0.1
2,656,074	+		MPMX19_02537	0.14	+0.2
2,656,074	+		MPMX19_02537	0.14	+0.5
2,656,074	+		MPMX19_02537	0.14	+1.1
2,656,074	+		MPMX19_02537	0.14	-1.5
2,656,074	+		MPMX19_02537	0.14	-2.3
2,656,074	+		MPMX19_02537	0.14	-0.3
2,656,074	+		MPMX19_02537	0.14	+0.4
2,656,075	-		MPMX19_02537	0.14	+0.2
2,656,075	-		MPMX19_02537	0.14	-1.5
2,656,075	-		MPMX19_02537	0.14	-0.1
2,656,075	-		MPMX19_02537	0.14	-0.8
2,656,075	-		MPMX19_02537	0.14	+0.1
2,656,075	-		MPMX19_02537	0.14	+1.1
2,656,075	-		MPMX19_02537	0.14	-0.8
2,656,075	-		MPMX19_02537	0.14	+0.7
2,656,075	-		MPMX19_02537	0.14	-0.2
2,656,278	+		MPMX19_02537	0.38	+0.1
2,656,278	+		MPMX19_02537	0.38	-1.8
2,656,278	+		MPMX19_02537	0.38	+0.8
2,656,278	+		MPMX19_02537	0.38	-0.6
2,656,278	+		MPMX19_02537	0.38	+0.5
2,656,279	-		MPMX19_02537	0.38	+1.2
2,656,279	-		MPMX19_02537	0.38	-2.1
2,656,279	-		MPMX19_02537	0.38	+0.4
2,656,279	-		MPMX19_02537	0.38	-0.6
2,656,279	-		MPMX19_02537	0.38	-0.8
2,656,290	+		MPMX19_02537	0.40	-0.0
2,656,290	+		MPMX19_02537	0.40	+0.2
2,656,290	+		MPMX19_02537	0.40	+0.2
2,656,290	+		MPMX19_02537	0.40	-0.0
2,656,290	+		MPMX19_02537	0.40	-2.3
2,656,290	+		MPMX19_02537	0.40	-0.2
2,656,291	-		MPMX19_02537	0.40	-0.8
2,656,291	-		MPMX19_02537	0.40	-0.6
2,656,291	-		MPMX19_02537	0.40	-0.3
2,656,291	-		MPMX19_02537	0.40	-0.1
2,656,291	-		MPMX19_02537	0.40	-0.3
2,656,291	-		MPMX19_02537	0.40	-0.0
2,656,291	-		MPMX19_02537	0.40	+0.7
2,656,467	+		MPMX19_02537	0.61	-1.1
2,656,468	-		MPMX19_02537	0.61	-1.6
2,656,468	-		MPMX19_02537	0.61	-0.9
2,656,731	+				-0.3
2,656,731	+				-0.7
2,656,731	+				+0.2
2,656,731	+				-0.3
2,656,731	+				-1.5
2,656,731	+				-1.3
2,656,732	-				+1.0
2,656,732	-				-0.8
2,656,732	-				-0.6
2,656,732	-				+0.2
2,656,732	-				-0.5
2,656,732	-				-1.4
2,656,732	-				-1.3
2,656,898	+				+0.0
2,656,898	+				-0.1
2,656,898	+				+0.4
2,656,899	-				-0.6
2,656,899	-				-0.7
2,657,033	+		MPMX19_02538	0.15	+0.4
2,657,033	+		MPMX19_02538	0.15	-0.5
2,657,033	+		MPMX19_02538	0.15	+0.7
2,657,034	-		MPMX19_02538	0.15	-1.8
2,657,034	-		MPMX19_02538	0.15	-0.9
2,657,034	-		MPMX19_02538	0.15	-0.5
2,657,034	-		MPMX19_02538	0.15	-0.9
2,657,482	+				+0.2
2,657,482	+				-1.3
2,657,482	+				-0.2
2,657,482	+				-0.8
2,657,482	+				-0.0
2,657,482	+				+0.7
2,657,482	+				+0.1
2,657,482	+				+0.7
2,657,482	+				-0.6
2,657,482	+				+0.7
2,657,482	+				-0.5
2,657,482	+				-0.6
2,657,482	+				-0.3
2,657,482	+				+1.2
2,657,482	+				+1.2
2,657,482	+				-1.5
2,657,482	+				-0.1
2,657,482	+				-1.3
2,657,482	+				+1.9
2,657,482	+				-1.6
2,657,483	-				+0.1
2,657,483	-				-0.5
2,657,483	-				+1.2
2,657,483	-				-0.4
2,657,483	-				-0.1
2,657,483	-				-1.9
2,657,483	-				-2.4
2,657,483	-				-0.6
2,657,483	-				-1.2
2,657,483	-				-0.7
2,657,483	-				+1.5
2,657,483	-				-0.5
2,657,483	-				-2.3
2,657,483	-				+0.2
2,657,483	-				-0.2
2,657,483	-				-2.3
2,657,483	-				-1.2
2,657,483	-				-1.0
2,657,483	-				-0.6
2,657,511	+				+0.4
2,657,512	-				+0.5
2,657,512	-				-1.2
2,657,518	+				-1.0
2,657,518	+				-0.5
2,657,518	+				-1.3
2,657,518	+				-1.4
2,657,519	-				-1.6
2,657,519	-				-1.5
2,657,519	-				-0.0
2,657,519	-				-0.7
2,657,638	+		MPMX19_02539	0.23	-0.9
2,657,638	+		MPMX19_02539	0.23	-3.0
2,657,639	-		MPMX19_02539	0.24	-0.2
2,657,639	-		MPMX19_02539	0.24	-0.9
2,657,639	-		MPMX19_02539	0.24	-0.8
2,657,639	-		MPMX19_02539	0.24	+0.8
2,657,639	-		MPMX19_02539	0.24	-0.4
2,657,639	-		MPMX19_02539	0.24	-0.8
2,657,639	-		MPMX19_02539	0.24	-0.8
2,657,639	-		MPMX19_02539	0.24	-0.3
2,657,707	+		MPMX19_02539	0.41	+0.3
2,657,707	+		MPMX19_02539	0.41	-0.5
2,657,708	-		MPMX19_02539	0.41	-3.0
2,657,708	-		MPMX19_02539	0.41	-0.3
2,657,941	+				-0.6
2,657,942	-				-0.1
2,657,942	-				-0.3
2,657,942	-				-0.5
2,657,942	-				-0.5
2,657,942	-				-1.1
2,657,942	-				-1.2
2,657,942	-				+0.9
2,657,942	-				+0.2
2,658,057	+				-0.6
2,658,057	+				-0.8
2,658,057	+				+1.1
2,658,057	+				+0.2
2,658,057	+				-0.2
2,658,057	+				+1.4
2,658,057	+				+0.1
2,658,057	+				+0.4
2,658,057	+				-0.5
2,658,057	+				+1.1
2,658,057	+				-0.5
2,658,057	+				+0.2
2,658,057	+				+0.2
2,658,069	+				+0.4
2,658,069	+				-2.3
2,658,069	+				-0.9
2,658,069	+				-0.1
2,658,069	+				-0.3
2,658,069	+				+0.2
2,658,069	+				+0.2
2,658,069	+				-0.2
2,658,069	+				-0.1
2,658,069	+				+0.2
2,658,069	+				+1.4
2,658,070	-				-0.9
2,658,070	-				-0.6
2,658,070	-				-0.2
2,658,070	-				+0.7
2,658,070	-				+1.5
2,658,070	-				-1.0
2,658,081	+				-0.1
2,658,081	+				-2.1
2,658,081	+				-0.9
2,658,297	+		MPMX19_02540	0.58	+2.2
2,658,297	+		MPMX19_02540	0.58	-0.1
2,658,297	+		MPMX19_02540	0.58	+1.2
2,658,297	+		MPMX19_02540	0.58	+1.2
2,658,297	+		MPMX19_02540	0.58	-1.5
2,658,297	+		MPMX19_02540	0.58	-0.2
2,658,297	+		MPMX19_02540	0.58	-0.5
2,658,297	+		MPMX19_02540	0.58	-0.1
2,658,297	+		MPMX19_02540	0.58	-1.5
2,658,297	+		MPMX19_02540	0.58	+0.4
2,658,298	-		MPMX19_02540	0.58	+0.7
2,658,298	-		MPMX19_02540	0.58	-1.1
2,658,298	-		MPMX19_02540	0.58	-0.9
2,658,298	-		MPMX19_02540	0.58	-0.3
2,658,298	-		MPMX19_02540	0.58	+0.7
2,658,298	-		MPMX19_02540	0.58	-0.3
2,658,298	-		MPMX19_02540	0.58	-1.1
2,658,298	-		MPMX19_02540	0.58	-0.6
2,658,298	-		MPMX19_02540	0.58	-0.9
2,658,298	-		MPMX19_02540	0.58	+0.7
2,658,298	-		MPMX19_02540	0.58	-0.1
2,658,298	-		MPMX19_02540	0.58	-1.7
2,658,438	+				+0.4
2,658,438	+				+0.1
2,658,438	+				-1.3
2,658,438	+				+0.2
2,658,438	+				-0.9
2,658,438	+				-1.6
2,658,438	+				+0.3
2,658,438	+				+0.8
2,658,438	+				-0.6
2,658,438	+				-0.9
2,658,438	+				-1.8
2,658,438	+				-1.6
2,658,438	+				-0.7
2,658,438	+				+0.1
2,658,439	-				-0.5
2,658,439	-				-0.3
2,658,439	-				+0.2
2,658,439	-				-1.1
2,658,439	-				-0.6
2,658,439	-				-0.5
2,658,439	-				-0.9
2,658,439	-				+0.1
2,658,439	-				-0.0
2,658,439	-				-0.7
2,658,439	-				+0.1
2,658,439	-				-0.4
2,658,439	-				-0.9
2,658,439	-				+0.9
2,658,439	-				-1.6
2,658,439	-				+0.7
2,658,439	-				-0.6
2,658,439	-				+0.2
2,658,439	-				+1.0
2,658,439	-				-0.2
2,658,439	-				-0.5
2,658,439	-				+0.1
2,658,439	-				-0.5
2,658,439	-				-1.1