Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02514

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,630,238	+		MPMX19_02512	0.55	-1.3
2,630,238	+		MPMX19_02512	0.55	-0.8
2,630,238	+		MPMX19_02512	0.55	+0.4
2,630,238	+		MPMX19_02512	0.55	-0.6
2,630,238	+		MPMX19_02512	0.55	-0.3
2,630,238	+		MPMX19_02512	0.55	+0.5
2,630,238	+		MPMX19_02512	0.55	+0.4
2,630,238	+		MPMX19_02512	0.55	+0.9
2,630,253	+		MPMX19_02512	0.56	-0.1
2,630,253	+		MPMX19_02512	0.56	+0.5
2,630,253	+		MPMX19_02512	0.56	-1.4
2,630,253	+		MPMX19_02512	0.56	-1.2
2,630,613	+		MPMX19_02512	0.89	-2.3
2,630,613	+		MPMX19_02512	0.89	+0.8
2,630,613	+		MPMX19_02512	0.89	-1.2
2,630,613	+		MPMX19_02512	0.89	-0.3
2,631,206	+				-0.2
2,631,206	+				+0.7
2,631,207	-				-0.1
2,631,242	-				-0.9
2,631,243	+				+0.9
2,631,243	+				+0.9
2,631,243	+				+0.2
2,631,243	+				-1.4
2,631,243	+				-0.7
2,631,243	+				-0.2
2,631,243	+				+2.2
2,631,243	+				-0.3
2,631,243	+				-1.5
2,631,243	+				-0.1
2,631,243	+				-0.8
2,631,243	+				-1.3
2,631,243	+				-0.8
2,631,243	+				-1.0
2,631,243	+				+1.6
2,631,243	+				+0.7
2,631,243	+				-0.1
2,631,243	+				-1.9
2,631,243	+				-0.1
2,631,243	+				+1.1
2,631,243	+				-0.9
2,631,243	+				-0.8
2,631,243	+				+0.4
2,631,243	+				-0.6
2,631,243	+				+1.2
2,631,243	+				-0.6
2,631,243	+				-0.4
2,631,243	+				+1.2
2,631,244	-				+0.8
2,631,244	-				-0.6
2,631,244	-				-0.6
2,631,244	-				-0.6
2,631,244	-				-0.9
2,631,244	-				-1.2
2,631,244	-				-0.1
2,631,244	-				+1.1
2,631,244	-				-1.7
2,631,244	-				+0.1
2,631,244	-				+0.4
2,631,244	-				-0.6
2,631,244	-				-0.9
2,631,244	-				-1.6
2,631,244	-				+0.1
2,631,244	-				-0.3
2,631,244	-				-0.3
2,631,244	-				-0.9
2,631,244	-				+1.2
2,631,244	-				-0.1
2,631,244	-				+2.2
2,631,244	-				-0.3
2,631,244	-				-0.9
2,631,244	-				-1.3
2,631,244	-				-0.3
2,631,244	-				+0.1
2,631,244	-				+0.2
2,631,244	-				-0.7
2,631,244	-				-0.3
2,631,244	-				+1.4
2,631,244	-				-0.6
2,631,244	-				+1.2
2,631,245	+				-0.6
2,631,245	+				-1.2
2,631,245	+				+0.7
2,631,245	+				-2.0
2,631,245	+				+0.4
2,631,245	+				-0.3
2,631,245	+				-1.1
2,631,245	+				+0.3
2,631,245	+				+0.2
2,631,245	+				-1.5
2,631,245	+				-0.1
2,631,245	+				+0.3
2,631,245	+				-0.7
2,631,245	+				-0.1
2,631,245	+				-0.8
2,631,246	-				-0.1
2,631,246	-				-2.0
2,631,246	-				-1.5
2,631,246	-				+0.8
2,631,246	-				+0.9
2,631,246	-				-0.1
2,631,246	-				-0.1
2,631,246	-				+0.4
2,631,246	-				-1.5
2,631,246	-				-1.0
2,631,246	-				-0.1
2,631,246	-				-0.6
2,631,246	-				+0.9
2,631,246	-				+0.9
2,631,246	-				+2.6
2,631,246	-				-1.9
2,631,513	+		MPMX19_02514	0.29	-0.8
2,631,513	+		MPMX19_02514	0.29	-0.8
2,631,513	+		MPMX19_02514	0.29	-0.4
2,631,514	-		MPMX19_02514	0.29	-0.3
2,631,514	-		MPMX19_02514	0.29	+1.2
2,632,189	+				-0.5
2,632,189	+				-0.8
2,632,189	+				-1.0
2,632,189	+				-1.6
2,632,189	+				+0.7
2,632,189	+				+0.1
2,632,189	+				-1.0
2,632,190	-				+0.1
2,632,190	-				+0.2
2,632,190	-				-0.3
2,632,190	-				+0.7
2,632,190	-				-1.2
2,632,190	-				+1.0
2,632,397	+				+0.2
2,632,397	+				-0.7
2,632,397	+				+1.7
2,632,397	+				-1.2
2,632,397	+				-1.0
2,632,397	+				-2.3
2,632,397	+				-0.1
2,632,397	+				+0.7
2,632,397	+				-0.6
2,632,397	+				-0.8
2,632,397	+				-1.1
2,632,397	+				+0.5
2,632,397	+				-0.3
2,632,397	+				-1.1
2,632,397	+				+0.8
2,632,397	+				-0.5
2,632,397	+				-0.1
2,632,397	+				-0.5
2,632,397	+				-0.2
2,632,397	+				-0.5
2,632,397	+				-1.6
2,632,397	+				-0.5
2,632,397	+				+0.4
2,632,397	+				+1.1
2,632,397	+				+0.4
2,632,397	+				-0.2
2,632,397	+				-0.8
2,632,397	+				-1.6
2,632,397	+				-0.5
2,632,397	+				-0.9
2,632,397	+				+0.2
2,632,397	+				-0.9
2,632,397	+				+0.5
2,632,397	+				-0.5
2,632,397	+				-1.5
2,632,397	+				-2.2
2,632,397	+				-0.5
2,632,397	+				-0.9
2,632,397	+				+0.2
2,632,397	+				+0.2
2,632,397	+				+0.5
2,632,397	+				-1.1
2,632,397	+				+0.7
2,632,398	-				-0.6
2,632,398	-				-1.8
2,632,398	-				+0.7
2,632,398	-				-0.5
2,632,398	-				-1.6
2,632,398	-				-0.3
2,632,398	-				+0.0
2,632,398	-				+1.2
2,632,398	-				+0.4
2,632,398	-				-0.2
2,632,398	-				+0.3
2,632,398	-				-0.9
2,632,398	-				+0.0
2,632,398	-				-0.5
2,632,398	-				+0.7
2,632,398	-				-0.8
2,632,398	-				-1.1
2,632,398	-				-2.2
2,632,398	-				-2.1
2,632,398	-				-0.8
2,632,398	-				+0.7
2,632,398	-				-1.3
2,632,398	-				-0.3
2,632,398	-				+0.7
2,632,398	-				-1.2
2,632,398	-				-0.3
2,632,398	-				-1.8
2,632,398	-				-1.3
2,632,398	-				+1.8
2,632,398	-				-2.7
2,632,398	-				+0.4
2,632,398	-				-1.4
2,632,398	-				-1.1
2,632,401	+				-0.0
2,632,401	+				-0.2
2,632,401	+				-2.2
2,632,401	+				-2.6
2,632,401	+				-1.6
2,632,401	+				+0.7
2,632,401	+				-0.1
2,632,401	+				-0.2
2,632,401	+				-1.1
2,632,401	+				+1.6
2,632,401	+				-0.8
2,632,401	+				-0.4
2,632,401	+				+0.2
2,632,401	+				+0.9
2,632,402	-				+0.4
2,632,402	-				-1.0
2,632,402	-				-0.3
2,632,402	-				-0.8
2,632,402	-				-0.9
2,632,402	-				-0.6
2,632,402	-				-0.3
2,632,402	-				+0.1
2,632,402	-				+0.8
2,632,402	-				-0.8
2,632,402	-				-1.2
2,632,402	-				-1.2
2,632,402	-				+1.1
2,632,402	-				-0.4
2,632,402	-				-0.3
2,632,402	-				-1.5
2,632,402	-				-3.0
2,632,402	-				-1.9
2,632,724	+		MPMX19_02515	0.16	-0.8
2,632,724	+		MPMX19_02515	0.16	+0.2
2,632,724	+		MPMX19_02515	0.16	-0.5
2,632,724	+		MPMX19_02515	0.16	-0.3
2,632,724	+		MPMX19_02515	0.16	+0.7
2,632,724	+		MPMX19_02515	0.16	-0.3
2,632,724	+		MPMX19_02515	0.16	-2.0
2,632,725	-		MPMX19_02515	0.16	+0.4
2,632,725	-		MPMX19_02515	0.16	-0.2
2,632,725	-		MPMX19_02515	0.16	-0.2
2,632,725	-		MPMX19_02515	0.16	-1.0
2,632,725	-		MPMX19_02515	0.16	-2.2
2,632,725	-		MPMX19_02515	0.16	-0.8
2,632,725	-		MPMX19_02515	0.16	+1.2
2,632,725	-		MPMX19_02515	0.16	+0.2
2,632,970	+		MPMX19_02515	0.32	-0.5
2,632,970	+		MPMX19_02515	0.32	-0.2
2,632,970	+		MPMX19_02515	0.32	-0.9
2,632,970	+		MPMX19_02515	0.32	-2.2
2,632,971	-		MPMX19_02515	0.32	-1.2
2,632,971	-		MPMX19_02515	0.32	-0.4
2,633,024	+		MPMX19_02515	0.35	-1.5
2,633,024	+		MPMX19_02515	0.35	-0.9
2,633,024	+		MPMX19_02515	0.35	-0.3
2,633,024	+		MPMX19_02515	0.35	+0.9
2,633,024	+		MPMX19_02515	0.35	-0.9
2,633,024	+		MPMX19_02515	0.35	-0.7
2,633,024	+		MPMX19_02515	0.35	-0.3
2,633,024	+		MPMX19_02515	0.35	-1.5
2,633,024	+		MPMX19_02515	0.35	+0.7
2,633,024	+		MPMX19_02515	0.35	-0.1
2,633,024	+		MPMX19_02515	0.35	-1.3
2,633,024	+		MPMX19_02515	0.35	+0.1
2,633,024	+		MPMX19_02515	0.35	-2.0
2,633,024	+		MPMX19_02515	0.35	-0.1
2,633,024	+		MPMX19_02515	0.35	-0.7
2,633,024	+		MPMX19_02515	0.35	+0.4
2,633,024	+		MPMX19_02515	0.35	-1.9
2,633,024	+		MPMX19_02515	0.35	-0.5
2,633,024	+		MPMX19_02515	0.35	-0.6
2,633,024	+		MPMX19_02515	0.35	+0.9
2,633,024	+		MPMX19_02515	0.35	-2.1
2,633,025	-		MPMX19_02515	0.35	-1.6
2,633,025	-		MPMX19_02515	0.35	-0.6
2,633,025	-		MPMX19_02515	0.35	-1.8
2,633,025	-		MPMX19_02515	0.35	-0.2
2,633,025	-		MPMX19_02515	0.35	-0.8
2,633,025	-		MPMX19_02515	0.35	+0.2
2,633,025	-		MPMX19_02515	0.35	-0.9
2,633,025	-		MPMX19_02515	0.35	-0.6
2,633,025	-		MPMX19_02515	0.35	+0.1
2,633,025	-		MPMX19_02515	0.35	-1.7
2,633,025	-		MPMX19_02515	0.35	-0.3
2,633,025	-		MPMX19_02515	0.35	-1.2
2,633,025	-		MPMX19_02515	0.35	-0.1
2,633,025	-		MPMX19_02515	0.35	+0.1
2,633,025	-		MPMX19_02515	0.35	-1.2
2,633,025	-		MPMX19_02515	0.35	-0.3
2,633,025	-		MPMX19_02515	0.35	+0.9
2,633,025	-		MPMX19_02515	0.35	-0.6
2,633,025	-		MPMX19_02515	0.35	-0.2
2,633,025	-		MPMX19_02515	0.35	+0.2
2,633,025	-		MPMX19_02515	0.35	-0.1
2,633,025	-		MPMX19_02515	0.35	-2.0
2,633,025	-		MPMX19_02515	0.35	+0.1
2,633,025	-		MPMX19_02515	0.35	-0.6