Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02496

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,613,853	+		MPMX19_02495	0.32	+0.9
2,614,045	+		MPMX19_02495	0.51	+0.2
2,614,045	+		MPMX19_02495	0.51	+0.4
2,614,045	+		MPMX19_02495	0.51	+0.9
2,614,045	+		MPMX19_02495	0.51	-0.1
2,614,045	+		MPMX19_02495	0.51	-0.9
2,614,045	+		MPMX19_02495	0.51	+0.6
2,614,045	+		MPMX19_02495	0.51	-0.3
2,614,045	+		MPMX19_02495	0.51	+1.5
2,614,045	+		MPMX19_02495	0.51	-0.7
2,614,046	-		MPMX19_02495	0.51	+0.6
2,614,046	-		MPMX19_02495	0.51	+0.6
2,614,057	+		MPMX19_02495	0.52	-1.7
2,614,057	+		MPMX19_02495	0.52	+1.5
2,614,057	+		MPMX19_02495	0.52	-0.4
2,614,057	+		MPMX19_02495	0.52	+0.1
2,614,057	+		MPMX19_02495	0.52	-1.5
2,614,057	+		MPMX19_02495	0.52	+0.8
2,614,057	+		MPMX19_02495	0.52	-0.7
2,614,057	+		MPMX19_02495	0.52	+0.6
2,614,057	+		MPMX19_02495	0.52	+0.2
2,614,057	+		MPMX19_02495	0.52	-1.1
2,614,058	-		MPMX19_02495	0.53	-0.6
2,614,058	-		MPMX19_02495	0.53	-0.1
2,614,058	-		MPMX19_02495	0.53	-0.9
2,614,058	-		MPMX19_02495	0.53	-0.5
2,614,058	-		MPMX19_02495	0.53	-0.5
2,614,058	-		MPMX19_02495	0.53	+0.4
2,614,058	-		MPMX19_02495	0.53	+0.4
2,614,058	-		MPMX19_02495	0.53	-1.9
2,614,129	+		MPMX19_02495	0.60	-0.1
2,614,129	+		MPMX19_02495	0.60	+0.2
2,614,129	+		MPMX19_02495	0.60	-1.7
2,614,129	+		MPMX19_02495	0.60	+0.1
2,614,129	+		MPMX19_02495	0.60	-1.8
2,614,130	-		MPMX19_02495	0.60	-0.1
2,614,130	-		MPMX19_02495	0.60	-0.9
2,614,130	-		MPMX19_02495	0.60	-0.8
2,614,130	-		MPMX19_02495	0.60	+0.6
2,614,130	-		MPMX19_02495	0.60	-1.2
2,614,287	-		MPMX19_02495	0.75	-2.0
2,614,288	+		MPMX19_02495	0.75	+0.6
2,614,288	+		MPMX19_02495	0.75	-0.9
2,614,288	+		MPMX19_02495	0.75	-0.6
2,614,288	+		MPMX19_02495	0.75	-0.8
2,614,289	-		MPMX19_02495	0.75	+1.2
2,614,289	-		MPMX19_02495	0.75	+0.9
2,614,289	-		MPMX19_02495	0.75	-0.8
2,614,289	-		MPMX19_02495	0.75	-0.8
2,614,289	-		MPMX19_02495	0.75	-1.2
2,614,378	+		MPMX19_02495	0.84	+1.2
2,614,378	+		MPMX19_02495	0.84	-0.8
2,614,378	+		MPMX19_02495	0.84	-0.2
2,614,378	+		MPMX19_02495	0.84	-1.3
2,614,378	+		MPMX19_02495	0.84	+0.2
2,614,379	-		MPMX19_02495	0.84	-0.8
2,614,379	-		MPMX19_02495	0.84	-0.4
2,614,379	-		MPMX19_02495	0.84	-1.2
2,614,379	-		MPMX19_02495	0.84	+1.2
2,614,379	-		MPMX19_02495	0.84	-1.2
2,614,507	+				-0.8
2,614,508	-				+1.8
2,614,508	-				-1.8
2,614,583	+				-0.7
2,614,583	+				+0.6
2,614,583	+				-1.1
2,614,583	+				-0.4
2,614,583	+				+0.8
2,614,583	+				+0.9
2,614,583	+				-1.6
2,614,583	+				-1.4
2,614,583	+				-0.4
2,614,583	+				+0.1
2,614,583	+				-0.6
2,614,584	-				-0.3
2,614,584	-				-2.5
2,614,584	-				-1.9
2,614,584	-				+0.1
2,614,584	-				-0.7
2,614,584	-				+0.4
2,614,584	-				-0.7
2,614,584	-				-0.4
2,614,584	-				-0.8
2,614,584	-				-0.1
2,614,584	-				+0.9
2,614,584	-				-2.0
2,614,584	-				-0.5
2,614,584	-				-0.8
2,614,584	-				-0.0
2,614,584	-				-0.9
2,614,585	+				-1.7
2,614,585	+				-1.1
2,614,585	+				-0.1
2,614,585	+				+0.1
2,614,585	+				-0.4
2,614,586	-				-1.8
2,614,586	-				+0.2
2,614,586	-				-0.3
2,614,586	-				+0.2
2,614,586	-				-0.6
2,614,586	-				-0.4
2,614,586	-				-2.9
2,614,586	-				-1.5
2,614,586	-				-0.4
2,614,911	+		MPMX19_02496	0.44	-0.7
2,614,911	+		MPMX19_02496	0.44	-0.5
2,614,912	-		MPMX19_02496	0.45	-0.2
2,614,938	+		MPMX19_02496	0.50	-0.4
2,614,938	+		MPMX19_02496	0.50	+0.6
2,614,938	+		MPMX19_02496	0.50	-0.8
2,614,938	+		MPMX19_02496	0.50	-1.2
2,614,938	+		MPMX19_02496	0.50	-1.8
2,614,938	+		MPMX19_02496	0.50	-1.5
2,614,938	+		MPMX19_02496	0.50	-2.0
2,614,938	+		MPMX19_02496	0.50	-1.5
2,614,938	+		MPMX19_02496	0.50	-0.7
2,614,938	+		MPMX19_02496	0.50	-1.0
2,614,938	+		MPMX19_02496	0.50	+0.1
2,614,938	+		MPMX19_02496	0.50	-2.2
2,614,938	+		MPMX19_02496	0.50	+0.4
2,614,938	+		MPMX19_02496	0.50	+0.4
2,614,938	+		MPMX19_02496	0.50	-0.9
2,614,938	+		MPMX19_02496	0.50	-2.0
2,614,938	+		MPMX19_02496	0.50	+0.8
2,614,938	+		MPMX19_02496	0.50	-0.2
2,614,938	+		MPMX19_02496	0.50	-1.2
2,614,939	-		MPMX19_02496	0.50	-1.1
2,614,939	-		MPMX19_02496	0.50	+0.3
2,614,939	-		MPMX19_02496	0.50	-2.7
2,614,939	-		MPMX19_02496	0.50	+1.7
2,614,939	-		MPMX19_02496	0.50	-0.8
2,614,939	-		MPMX19_02496	0.50	-0.4
2,614,939	-		MPMX19_02496	0.50	+1.2
2,614,939	-		MPMX19_02496	0.50	+0.5
2,614,939	-		MPMX19_02496	0.50	+0.4
2,614,939	-		MPMX19_02496	0.50	+0.4
2,614,939	-		MPMX19_02496	0.50	+0.2
2,614,939	-		MPMX19_02496	0.50	-1.9
2,614,939	-		MPMX19_02496	0.50	+0.4
2,614,939	-		MPMX19_02496	0.50	+0.1
2,614,939	-		MPMX19_02496	0.50	-2.3
2,614,939	-		MPMX19_02496	0.50	-0.2
2,614,939	-		MPMX19_02496	0.50	-0.5
2,614,939	-		MPMX19_02496	0.50	-1.4
2,614,939	-		MPMX19_02496	0.50	+0.6
2,614,939	-		MPMX19_02496	0.50	-0.4
2,614,939	-		MPMX19_02496	0.50	-0.4
2,614,939	-		MPMX19_02496	0.50	-1.2
2,614,939	-		MPMX19_02496	0.50	+0.4
2,614,939	-		MPMX19_02496	0.50	-0.8
2,614,939	-		MPMX19_02496	0.50	-0.9
2,614,939	-		MPMX19_02496	0.50	+0.9
2,614,939	-		MPMX19_02496	0.50	-1.6
2,614,939	-		MPMX19_02496	0.50	-0.6
2,614,939	-		MPMX19_02496	0.50	-0.2
2,614,939	-		MPMX19_02496	0.50	-0.6
2,614,939	-		MPMX19_02496	0.50	-1.4
2,614,939	-		MPMX19_02496	0.50	-0.4
2,615,233	+				-0.9
2,615,233	+				-0.1
2,615,233	+				-0.4
2,615,233	+				-0.6
2,615,234	-				+1.1
2,615,234	-				-1.1
2,615,234	-				-1.2
2,615,234	-				+0.1
2,615,234	-				-1.4
2,615,234	-				+0.8
2,615,234	-				+1.4
2,615,234	-				-1.0
2,615,234	-				-1.1
2,615,290	+				+0.1
2,615,963	+		MPMX19_02497	0.62	-1.6
2,615,963	+		MPMX19_02497	0.62	-1.8
2,615,963	+		MPMX19_02497	0.62	-1.9
2,615,963	+		MPMX19_02497	0.62	-0.9
2,615,963	+		MPMX19_02497	0.62	-1.3
2,615,963	+		MPMX19_02497	0.62	-0.2
2,615,963	+		MPMX19_02497	0.62	+0.1
2,615,963	+		MPMX19_02497	0.62	+0.8
2,615,963	+		MPMX19_02497	0.62	-0.4
2,615,963	+		MPMX19_02497	0.62	-0.9
2,615,963	+		MPMX19_02497	0.62	-0.1
2,615,963	+		MPMX19_02497	0.62	-0.6
2,615,963	+		MPMX19_02497	0.62	-1.1
2,615,963	+		MPMX19_02497	0.62	-0.4
2,615,963	+		MPMX19_02497	0.62	-0.3
2,615,963	+		MPMX19_02497	0.62	-0.1
2,615,963	+		MPMX19_02497	0.62	-0.8
2,615,963	+		MPMX19_02497	0.62	-0.8
2,615,963	+		MPMX19_02497	0.62	+0.4
2,615,963	+		MPMX19_02497	0.62	+1.2
2,615,963	+		MPMX19_02497	0.62	+0.9
2,615,964	-		MPMX19_02497	0.62	+0.4
2,615,964	-		MPMX19_02497	0.62	-1.4
2,615,964	-		MPMX19_02497	0.62	-0.1
2,615,964	-		MPMX19_02497	0.62	-0.4
2,615,964	-		MPMX19_02497	0.62	-0.1
2,615,964	-		MPMX19_02497	0.62	-0.2
2,615,964	-		MPMX19_02497	0.62	-1.3
2,615,964	-		MPMX19_02497	0.62	+0.3
2,615,964	-		MPMX19_02497	0.62	-1.4
2,615,964	-		MPMX19_02497	0.62	+1.0
2,615,964	-		MPMX19_02497	0.62	+0.6
2,615,964	-		MPMX19_02497	0.62	-0.8
2,615,964	-		MPMX19_02497	0.62	-0.3
2,615,981	+		MPMX19_02497	0.64	+0.5
2,615,982	-		MPMX19_02497	0.64	+1.4
2,615,982	-		MPMX19_02497	0.64	-0.6
2,615,982	-		MPMX19_02497	0.64	+0.2
2,615,982	-		MPMX19_02497	0.64	+0.9
2,616,002	+		MPMX19_02497	0.65	-0.1
2,616,002	+		MPMX19_02497	0.65	-0.5
2,616,002	+		MPMX19_02497	0.65	-0.4
2,616,002	+		MPMX19_02497	0.65	+0.6
2,616,002	+		MPMX19_02497	0.65	+0.8
2,616,002	+		MPMX19_02497	0.65	+1.0
2,616,002	+		MPMX19_02497	0.65	+1.2
2,616,002	+		MPMX19_02497	0.65	-0.4
2,616,003	-		MPMX19_02497	0.65	+0.4
2,616,003	-		MPMX19_02497	0.65	-1.2
2,616,003	-		MPMX19_02497	0.65	-1.0
2,616,003	-		MPMX19_02497	0.65	-0.9
2,616,003	-		MPMX19_02497	0.65	-0.1
2,616,003	-		MPMX19_02497	0.65	+0.4
2,616,003	-		MPMX19_02497	0.65	-0.6
2,616,003	-		MPMX19_02497	0.65	-1.4
2,616,003	-		MPMX19_02497	0.65	+0.5
2,616,003	-		MPMX19_02497	0.65	+1.0
2,616,098	+		MPMX19_02497	0.73	-0.2
2,616,098	+		MPMX19_02497	0.73	-1.1
2,616,098	+		MPMX19_02497	0.73	+1.0
2,616,098	+		MPMX19_02497	0.73	-0.7
2,616,098	+		MPMX19_02497	0.73	-0.4
2,616,098	+		MPMX19_02497	0.73	-1.0
2,616,098	+		MPMX19_02497	0.73	-0.7
2,616,098	+		MPMX19_02497	0.73	+0.7
2,616,099	-		MPMX19_02497	0.73	+0.3
2,616,099	-		MPMX19_02497	0.73	-0.5
2,616,099	-		MPMX19_02497	0.73	-0.2
2,616,099	-		MPMX19_02497	0.73	-0.8
2,616,099	-		MPMX19_02497	0.73	-0.1
2,616,099	-		MPMX19_02497	0.73	-0.7
2,616,099	-		MPMX19_02497	0.73	-2.1
2,616,099	-		MPMX19_02497	0.73	+1.2
2,616,099	-		MPMX19_02497	0.73	+1.8
2,616,099	-		MPMX19_02497	0.73	-0.6
2,616,099	-		MPMX19_02497	0.73	-0.2
2,616,099	-		MPMX19_02497	0.73	+0.1
2,616,099	-		MPMX19_02497	0.73	-1.7