Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02471 and MPMX19_02472 overlap by 4 nucleotides MPMX19_02472 and MPMX19_02473 are separated by 27 nucleotides MPMX19_02473 and MPMX19_02474 are separated by 22 nucleotides
MPMX19_02471: MPMX19_02471 - Ribosomal RNA small subunit methyltransferase I, at 2,592,796 to 2,593,716
_02471
MPMX19_02472: MPMX19_02472 - hypothetical protein, at 2,593,713 to 2,594,081
_02472
MPMX19_02473: MPMX19_02473 - hypothetical protein, at 2,594,109 to 2,594,954
_02473
MPMX19_02474: MPMX19_02474 - Glutathione synthetase, at 2,594,977 to 2,595,924
_02474
Position (kb)
2594
2595 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2593.153 kb on + strand, within MPMX19_02471 at 2593.153 kb on + strand, within MPMX19_02471 at 2593.153 kb on + strand, within MPMX19_02471 at 2593.153 kb on + strand, within MPMX19_02471 at 2593.154 kb on - strand, within MPMX19_02471 at 2593.398 kb on + strand, within MPMX19_02471 at 2593.399 kb on - strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.447 kb on + strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.448 kb on - strand, within MPMX19_02471 at 2593.492 kb on + strand, within MPMX19_02471 at 2593.492 kb on + strand, within MPMX19_02471 at 2593.492 kb on + strand, within MPMX19_02471 at 2593.492 kb on + strand, within MPMX19_02471 at 2593.492 kb on + strand, within MPMX19_02471 at 2593.493 kb on - strand, within MPMX19_02471 at 2593.493 kb on - strand, within MPMX19_02471 at 2593.493 kb on - strand, within MPMX19_02471 at 2593.672 kb on + strand at 2593.672 kb on + strand at 2593.672 kb on + strand at 2593.672 kb on + strand at 2593.673 kb on - strand at 2593.995 kb on + strand, within MPMX19_02472 at 2593.995 kb on + strand, within MPMX19_02472 at 2593.996 kb on - strand, within MPMX19_02472 at 2593.996 kb on - strand, within MPMX19_02472 at 2593.996 kb on - strand, within MPMX19_02472 at 2594.004 kb on + strand, within MPMX19_02472 at 2594.004 kb on + strand, within MPMX19_02472 at 2594.004 kb on + strand, within MPMX19_02472 at 2594.004 kb on + strand, within MPMX19_02472 at 2594.004 kb on + strand, within MPMX19_02472 at 2594.004 kb on + strand, within MPMX19_02472 at 2594.005 kb on - strand, within MPMX19_02472 at 2594.005 kb on - strand, within MPMX19_02472 at 2594.005 kb on - strand, within MPMX19_02472 at 2594.005 kb on - strand, within MPMX19_02472 at 2594.005 kb on - strand, within MPMX19_02472 at 2594.005 kb on - strand, within MPMX19_02472 at 2594.238 kb on + strand, within MPMX19_02473 at 2594.249 kb on + strand, within MPMX19_02473 at 2594.367 kb on + strand, within MPMX19_02473 at 2594.367 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.388 kb on + strand, within MPMX19_02473 at 2594.389 kb on - strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.466 kb on + strand, within MPMX19_02473 at 2594.467 kb on - strand, within MPMX19_02473 at 2594.467 kb on - strand, within MPMX19_02473 at 2594.510 kb on + strand, within MPMX19_02473 at 2594.510 kb on + strand, within MPMX19_02473 at 2594.510 kb on + strand, within MPMX19_02473 at 2594.510 kb on + strand, within MPMX19_02473 at 2594.510 kb on + strand, within MPMX19_02473 at 2594.510 kb on + strand, within MPMX19_02473 at 2594.510 kb on + strand, within MPMX19_02473 at 2594.627 kb on + strand, within MPMX19_02473 at 2594.664 kb on + strand, within MPMX19_02473 at 2594.664 kb on + strand, within MPMX19_02473 at 2594.664 kb on + strand, within MPMX19_02473 at 2594.665 kb on - strand, within MPMX19_02473 at 2594.665 kb on - strand, within MPMX19_02473 at 2594.665 kb on - strand, within MPMX19_02473 at 2594.665 kb on - strand, within MPMX19_02473 at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.922 kb on + strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.923 kb on - strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.946 kb on + strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.947 kb on - strand at 2595.952 kb on + strand at 2595.952 kb on + strand at 2595.953 kb on - strand at 2595.953 kb on - strand at 2595.953 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 2,593,153 + MPMX19_02471 0.39 -0.1 2,593,153 + MPMX19_02471 0.39 -0.5 2,593,153 + MPMX19_02471 0.39 -2.3 2,593,153 + MPMX19_02471 0.39 +0.1 2,593,154 - MPMX19_02471 0.39 +0.0 2,593,398 + MPMX19_02471 0.65 -0.1 2,593,399 - MPMX19_02471 0.65 +0.0 2,593,447 + MPMX19_02471 0.71 -0.6 2,593,447 + MPMX19_02471 0.71 -0.7 2,593,447 + MPMX19_02471 0.71 +0.4 2,593,447 + MPMX19_02471 0.71 -0.2 2,593,447 + MPMX19_02471 0.71 -0.4 2,593,447 + MPMX19_02471 0.71 -0.5 2,593,447 + MPMX19_02471 0.71 -0.2 2,593,447 + MPMX19_02471 0.71 -1.5 2,593,447 + MPMX19_02471 0.71 -0.4 2,593,447 + MPMX19_02471 0.71 -0.7 2,593,447 + MPMX19_02471 0.71 +0.2 2,593,448 - MPMX19_02471 0.71 -1.5 2,593,448 - MPMX19_02471 0.71 -2.9 2,593,448 - MPMX19_02471 0.71 +0.6 2,593,448 - MPMX19_02471 0.71 -0.8 2,593,448 - MPMX19_02471 0.71 -0.6 2,593,448 - MPMX19_02471 0.71 -0.9 2,593,448 - MPMX19_02471 0.71 +0.2 2,593,448 - MPMX19_02471 0.71 -1.2 2,593,448 - MPMX19_02471 0.71 -0.8 2,593,492 + MPMX19_02471 0.76 +1.6 2,593,492 + MPMX19_02471 0.76 -1.7 2,593,492 + MPMX19_02471 0.76 -1.2 2,593,492 + MPMX19_02471 0.76 -2.2 2,593,492 + MPMX19_02471 0.76 +0.4 2,593,493 - MPMX19_02471 0.76 -0.6 2,593,493 - MPMX19_02471 0.76 -0.4 2,593,493 - MPMX19_02471 0.76 -1.4 2,593,672 + -0.6 2,593,672 + +0.0 2,593,672 + +0.5 2,593,672 + +0.1 2,593,673 - -0.9 2,593,995 + MPMX19_02472 0.76 -0.9 2,593,995 + MPMX19_02472 0.76 -0.4 2,593,996 - MPMX19_02472 0.77 -1.2 2,593,996 - MPMX19_02472 0.77 +0.8 2,593,996 - MPMX19_02472 0.77 +0.1 2,594,004 + MPMX19_02472 0.79 -1.2 2,594,004 + MPMX19_02472 0.79 -0.9 2,594,004 + MPMX19_02472 0.79 -1.2 2,594,004 + MPMX19_02472 0.79 -0.1 2,594,004 + MPMX19_02472 0.79 -0.4 2,594,004 + MPMX19_02472 0.79 +1.0 2,594,005 - MPMX19_02472 0.79 +1.0 2,594,005 - MPMX19_02472 0.79 -0.9 2,594,005 - MPMX19_02472 0.79 +0.7 2,594,005 - MPMX19_02472 0.79 +0.5 2,594,005 - MPMX19_02472 0.79 -0.2 2,594,005 - MPMX19_02472 0.79 -0.4 2,594,238 + MPMX19_02473 0.15 +0.2 2,594,249 + MPMX19_02473 0.17 -0.6 2,594,367 + MPMX19_02473 0.30 -0.1 2,594,367 + MPMX19_02473 0.30 +0.5 2,594,388 + MPMX19_02473 0.33 -0.1 2,594,388 + MPMX19_02473 0.33 -1.2 2,594,388 + MPMX19_02473 0.33 -0.5 2,594,388 + MPMX19_02473 0.33 +2.0 2,594,388 + MPMX19_02473 0.33 -0.6 2,594,388 + MPMX19_02473 0.33 -2.2 2,594,388 + MPMX19_02473 0.33 -1.2 2,594,388 + MPMX19_02473 0.33 -1.4 2,594,388 + MPMX19_02473 0.33 +1.8 2,594,388 + MPMX19_02473 0.33 -0.4 2,594,388 + MPMX19_02473 0.33 -0.7 2,594,388 + MPMX19_02473 0.33 -0.4 2,594,388 + MPMX19_02473 0.33 -1.2 2,594,388 + MPMX19_02473 0.33 -0.6 2,594,388 + MPMX19_02473 0.33 -2.1 2,594,388 + MPMX19_02473 0.33 -0.6 2,594,388 + MPMX19_02473 0.33 -1.4 2,594,388 + MPMX19_02473 0.33 +0.8 2,594,388 + MPMX19_02473 0.33 -1.2 2,594,388 + MPMX19_02473 0.33 -1.4 2,594,388 + MPMX19_02473 0.33 +0.2 2,594,388 + MPMX19_02473 0.33 -2.5 2,594,388 + MPMX19_02473 0.33 -0.1 2,594,388 + MPMX19_02473 0.33 -1.0 2,594,389 - MPMX19_02473 0.33 +1.5 2,594,466 + MPMX19_02473 0.42 -0.8 2,594,466 + MPMX19_02473 0.42 -0.8 2,594,466 + MPMX19_02473 0.42 -0.8 2,594,466 + MPMX19_02473 0.42 +1.6 2,594,466 + MPMX19_02473 0.42 -0.7 2,594,466 + MPMX19_02473 0.42 -1.4 2,594,466 + MPMX19_02473 0.42 -0.9 2,594,466 + MPMX19_02473 0.42 -0.4 2,594,466 + MPMX19_02473 0.42 +1.2 2,594,466 + MPMX19_02473 0.42 -0.9 2,594,466 + MPMX19_02473 0.42 -1.2 2,594,466 + MPMX19_02473 0.42 -1.4 2,594,466 + MPMX19_02473 0.42 -1.6 2,594,466 + MPMX19_02473 0.42 +0.1 2,594,466 + MPMX19_02473 0.42 -0.2 2,594,466 + MPMX19_02473 0.42 -1.5 2,594,466 + MPMX19_02473 0.42 -1.4 2,594,466 + MPMX19_02473 0.42 -0.1 2,594,466 + MPMX19_02473 0.42 +1.5 2,594,466 + MPMX19_02473 0.42 +0.1 2,594,466 + MPMX19_02473 0.42 +0.2 2,594,466 + MPMX19_02473 0.42 +0.1 2,594,466 + MPMX19_02473 0.42 +0.0 2,594,466 + MPMX19_02473 0.42 +0.9 2,594,466 + MPMX19_02473 0.42 -2.0 2,594,466 + MPMX19_02473 0.42 +0.1 2,594,466 + MPMX19_02473 0.42 -0.4 2,594,466 + MPMX19_02473 0.42 -1.2 2,594,466 + MPMX19_02473 0.42 -0.8 2,594,466 + MPMX19_02473 0.42 +0.2 2,594,466 + MPMX19_02473 0.42 -1.6 2,594,466 + MPMX19_02473 0.42 +0.8 2,594,466 + MPMX19_02473 0.42 -0.6 2,594,466 + MPMX19_02473 0.42 -0.1 2,594,466 + MPMX19_02473 0.42 -0.6 2,594,466 + MPMX19_02473 0.42 +0.6 2,594,467 - MPMX19_02473 0.42 +2.2 2,594,467 - MPMX19_02473 0.42 +0.8 2,594,510 + MPMX19_02473 0.47 -0.1 2,594,510 + MPMX19_02473 0.47 -1.1 2,594,510 + MPMX19_02473 0.47 -2.8 2,594,510 + MPMX19_02473 0.47 -0.7 2,594,510 + MPMX19_02473 0.47 -1.1 2,594,510 + MPMX19_02473 0.47 -0.6 2,594,510 + MPMX19_02473 0.47 -1.3 2,594,627 + MPMX19_02473 0.61 -0.4 2,594,664 + MPMX19_02473 0.66 -0.9 2,594,664 + MPMX19_02473 0.66 -0.7 2,594,664 + MPMX19_02473 0.66 -0.1 2,594,665 - MPMX19_02473 0.66 -1.8 2,594,665 - MPMX19_02473 0.66 -0.5 2,594,665 - MPMX19_02473 0.66 +0.0 2,594,665 - MPMX19_02473 0.66 -1.5 2,595,922 + -1.0 2,595,922 + -0.4 2,595,922 + +1.6 2,595,922 + +0.6 2,595,922 + -0.9 2,595,922 + +0.5 2,595,922 + -0.9 2,595,922 + -2.9 2,595,922 + -0.2 2,595,922 + +1.1 2,595,922 + +0.3 2,595,922 + +0.5 2,595,922 + +0.8 2,595,922 + +0.1 2,595,923 - -1.7 2,595,923 - -0.6 2,595,923 - -0.1 2,595,923 - +0.5 2,595,923 - +1.6 2,595,923 - -1.1 2,595,923 - +0.4 2,595,923 - +0.2 2,595,923 - +0.2 2,595,946 + -0.4 2,595,946 + +0.2 2,595,946 + -0.9 2,595,946 + +0.4 2,595,946 + -1.0 2,595,946 + +0.5 2,595,946 + -1.2 2,595,946 + -0.8 2,595,946 + +0.0 2,595,946 + +0.9 2,595,946 + +0.3 2,595,946 + -0.4 2,595,946 + +0.2 2,595,946 + -1.4 2,595,947 - +0.1 2,595,947 - -1.7 2,595,947 - -0.7 2,595,947 - +0.7 2,595,947 - +0.3 2,595,947 - +0.4 2,595,947 - -0.4 2,595,947 - +1.1 2,595,947 - -1.2 2,595,947 - -0.5 2,595,947 - -0.1 2,595,947 - +1.4 2,595,947 - -0.8 2,595,947 - -1.0 2,595,947 - -0.6 2,595,947 - +0.9 2,595,947 - -0.5 2,595,947 - -0.1 2,595,947 - -0.9 2,595,947 - +0.5 2,595,947 - +0.9 2,595,952 + -0.4 2,595,952 + +0.9 2,595,953 - +0.8 2,595,953 - -0.8 2,595,953 - -0.2
Or see this region's nucleotide sequence