Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02375

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,499,219	+		MPMX19_02374	0.63	-2.5
2,499,219	+		MPMX19_02374	0.63	+0.2
2,499,219	+		MPMX19_02374	0.63	-0.9
2,499,219	+		MPMX19_02374	0.63	+0.4
2,499,220	-		MPMX19_02374	0.63	-0.6
2,499,220	-		MPMX19_02374	0.63	+1.4
2,499,220	-		MPMX19_02374	0.63	-2.0
2,499,220	-		MPMX19_02374	0.63	+1.4
2,499,220	-		MPMX19_02374	0.63	-1.1
2,499,220	-		MPMX19_02374	0.63	-0.6
2,499,298	+		MPMX19_02374	0.68	+1.0
2,499,299	-		MPMX19_02374	0.68	-1.5
2,499,825	+				-0.4
2,499,825	+				-0.8
2,499,825	+				-1.8
2,499,825	+				-0.3
2,499,825	+				-1.2
2,499,825	+				+0.0
2,499,825	+				+0.4
2,499,826	-				+0.2
2,499,826	-				-0.8
2,499,826	-				+0.4
2,499,826	-				+0.7
2,499,826	-				-0.5
2,499,826	-				-1.3
2,499,842	+				-1.4
2,499,843	-				-1.3
2,499,855	+				-2.2
2,499,856	-				+0.1
2,499,892	-				-1.2
2,499,892	-				-1.3
2,499,922	+				-1.4
2,499,922	+				+0.7
2,499,922	+				-0.8
2,499,922	+				-0.8
2,499,922	+				-0.1
2,499,922	+				+0.9
2,499,922	+				-2.7
2,499,922	+				+0.1
2,499,922	+				-1.1
2,499,922	+				-0.2
2,499,922	+				-0.8
2,499,922	+				-0.8
2,499,922	+				-0.8
2,499,922	+				-0.3
2,499,922	+				+1.2
2,499,922	+				+0.7
2,499,922	+				+0.7
2,499,922	+				-0.9
2,499,923	-				-0.9
2,499,923	-				-0.8
2,499,923	-				-0.5
2,499,923	-				+0.6
2,499,923	-				+0.4
2,499,923	-				-0.9
2,499,923	-				-1.8
2,499,923	-				-0.6
2,499,923	-				+0.1
2,499,923	-				-0.9
2,499,923	-				+1.0
2,499,923	-				+0.2
2,499,923	-				-0.3
2,499,923	-				+0.8
2,499,923	-				-0.6
2,499,923	-				-0.8
2,499,923	-				-0.8
2,499,957	+				+0.4
2,499,957	+				-0.6
2,499,957	+				+0.4
2,499,957	+				-1.3
2,499,957	+				+0.4
2,499,958	-				-1.3
2,499,958	-				+1.2
2,499,958	-				+0.2
2,499,994	+				-1.2
2,499,994	+				+0.5
2,499,994	+				-0.1
2,499,994	+				-1.1
2,499,995	-				-0.3
2,499,995	-				-0.8
2,499,995	-				+0.0
2,499,995	-				-0.9
2,499,995	-				-0.9
2,499,995	-				-0.9
2,499,995	-				-0.8
2,499,995	-				+0.8
2,499,995	-				-2.4
2,500,000	+				+0.4
2,500,000	+				-1.2
2,500,000	+				-2.5
2,500,000	+				-1.2
2,500,000	+				-1.7
2,500,000	+				+0.9
2,500,000	+				-1.2
2,500,000	+				-0.1
2,500,001	-				+0.1
2,500,001	-				-0.3
2,500,001	-				+1.7
2,500,022	+				-0.5
2,500,022	+				+0.2
2,500,022	+				+1.2
2,500,022	+				+0.7
2,500,187	+		MPMX19_02375	0.17	-1.9
2,500,187	+		MPMX19_02375	0.17	+0.2
2,500,187	+		MPMX19_02375	0.17	+0.4
2,500,187	+		MPMX19_02375	0.17	-0.6
2,500,188	-		MPMX19_02375	0.17	-1.6
2,500,188	-		MPMX19_02375	0.17	-0.1
2,500,188	-		MPMX19_02375	0.17	+0.4
2,500,188	-		MPMX19_02375	0.17	-0.8
2,500,541	+		MPMX19_02375	0.49	+0.2
2,500,541	+		MPMX19_02375	0.49	-1.3
2,500,541	+		MPMX19_02375	0.49	+0.4
2,500,541	+		MPMX19_02375	0.49	-0.8
2,500,541	+		MPMX19_02375	0.49	-0.1
2,500,541	+		MPMX19_02375	0.49	-1.0
2,500,541	+		MPMX19_02375	0.49	-1.2
2,500,541	+		MPMX19_02375	0.49	-0.3
2,500,541	+		MPMX19_02375	0.49	-0.6
2,500,541	+		MPMX19_02375	0.49	-0.2
2,500,541	+		MPMX19_02375	0.49	-0.7
2,500,541	+		MPMX19_02375	0.49	-0.2
2,500,541	+		MPMX19_02375	0.49	+0.4
2,500,541	+		MPMX19_02375	0.49	+0.3
2,500,541	+		MPMX19_02375	0.49	-1.7
2,500,541	+		MPMX19_02375	0.49	-1.3
2,500,542	-		MPMX19_02375	0.50	-1.3
2,500,542	-		MPMX19_02375	0.50	-1.7
2,500,542	-		MPMX19_02375	0.50	-0.2
2,500,542	-		MPMX19_02375	0.50	-1.6
2,500,542	-		MPMX19_02375	0.50	-1.5
2,500,542	-		MPMX19_02375	0.50	+0.4
2,500,542	-		MPMX19_02375	0.50	-1.0
2,500,542	-		MPMX19_02375	0.50	+0.2
2,500,542	-		MPMX19_02375	0.50	-1.3
2,500,542	-		MPMX19_02375	0.50	-0.8
2,500,542	-		MPMX19_02375	0.50	-3.4
2,500,772	+		MPMX19_02375	0.71	-0.6
2,500,772	+		MPMX19_02375	0.71	+0.0
2,500,772	+		MPMX19_02375	0.71	+0.5
2,500,772	+		MPMX19_02375	0.71	+0.4
2,500,772	+		MPMX19_02375	0.71	-1.2
2,500,772	+		MPMX19_02375	0.71	-0.9
2,500,772	+		MPMX19_02375	0.71	+0.5
2,500,772	+		MPMX19_02375	0.71	+0.2
2,500,772	+		MPMX19_02375	0.71	-1.1
2,500,772	+		MPMX19_02375	0.71	-1.2
2,500,772	+		MPMX19_02375	0.71	-1.8
2,500,772	+		MPMX19_02375	0.71	-1.0
2,500,772	+		MPMX19_02375	0.71	+1.7
2,500,772	+		MPMX19_02375	0.71	+0.2
2,500,772	+		MPMX19_02375	0.71	+1.7
2,500,772	+		MPMX19_02375	0.71	-0.6
2,500,772	+		MPMX19_02375	0.71	-0.5
2,500,772	+		MPMX19_02375	0.71	-1.3
2,500,772	+		MPMX19_02375	0.71	+0.1
2,500,772	+		MPMX19_02375	0.71	-0.5
2,500,772	+		MPMX19_02375	0.71	+0.7
2,500,772	+		MPMX19_02375	0.71	-0.2
2,500,772	+		MPMX19_02375	0.71	-0.9
2,500,772	+		MPMX19_02375	0.71	-2.3
2,500,773	-		MPMX19_02375	0.71	-1.6
2,500,773	-		MPMX19_02375	0.71	-0.2
2,500,773	-		MPMX19_02375	0.71	-0.8
2,500,773	-		MPMX19_02375	0.71	-0.9
2,500,773	-		MPMX19_02375	0.71	-0.3
2,500,773	-		MPMX19_02375	0.71	-1.1
2,500,773	-		MPMX19_02375	0.71	-0.3
2,500,773	-		MPMX19_02375	0.71	-0.3
2,500,773	-		MPMX19_02375	0.71	-2.4
2,500,773	-		MPMX19_02375	0.71	-0.6
2,500,773	-		MPMX19_02375	0.71	-0.1
2,500,773	-		MPMX19_02375	0.71	-1.5
2,500,773	-		MPMX19_02375	0.71	-0.3
2,500,773	-		MPMX19_02375	0.71	+0.0
2,500,814	+		MPMX19_02375	0.74	-0.8
2,500,814	+		MPMX19_02375	0.74	+1.0
2,500,814	+		MPMX19_02375	0.74	-0.5
2,500,814	+		MPMX19_02375	0.74	+0.1
2,500,814	+		MPMX19_02375	0.74	-0.8
2,500,814	+		MPMX19_02375	0.74	+1.2
2,500,814	+		MPMX19_02375	0.74	-0.8
2,500,814	+		MPMX19_02375	0.74	-0.9
2,500,814	+		MPMX19_02375	0.74	-1.9
2,500,814	+		MPMX19_02375	0.74	-0.9
2,500,814	+		MPMX19_02375	0.74	+0.2
2,500,814	+		MPMX19_02375	0.74	-0.3
2,500,814	+		MPMX19_02375	0.74	-0.5
2,500,814	+		MPMX19_02375	0.74	-1.6
2,500,814	+		MPMX19_02375	0.74	-1.1
2,500,814	+		MPMX19_02375	0.74	-0.7
2,500,814	+		MPMX19_02375	0.74	-0.9
2,500,814	+		MPMX19_02375	0.74	-0.1
2,500,814	+		MPMX19_02375	0.74	-0.2
2,500,814	+		MPMX19_02375	0.74	-1.2
2,500,814	+		MPMX19_02375	0.74	-0.5
2,500,814	+		MPMX19_02375	0.74	-0.8
2,500,814	+		MPMX19_02375	0.74	+0.7
2,500,814	+		MPMX19_02375	0.74	+0.8
2,500,815	-		MPMX19_02375	0.75	-1.3
2,500,815	-		MPMX19_02375	0.75	+0.4
2,500,815	-		MPMX19_02375	0.75	+0.2
2,500,815	-		MPMX19_02375	0.75	+0.2
2,500,815	-		MPMX19_02375	0.75	-1.9
2,500,815	-		MPMX19_02375	0.75	+0.1
2,500,815	-		MPMX19_02375	0.75	-2.3
2,500,815	-		MPMX19_02375	0.75	-0.3
2,500,815	-		MPMX19_02375	0.75	-0.4
2,500,815	-		MPMX19_02375	0.75	-0.7
2,500,815	-		MPMX19_02375	0.75	+1.5
2,500,815	-		MPMX19_02375	0.75	-2.0
2,500,815	-		MPMX19_02375	0.75	-0.6
2,500,815	-		MPMX19_02375	0.75	-0.1
2,500,815	-		MPMX19_02375	0.75	-0.1
2,500,815	-		MPMX19_02375	0.75	+0.3
2,500,815	-		MPMX19_02375	0.75	-0.3
2,500,815	-		MPMX19_02375	0.75	-0.9
2,500,815	-		MPMX19_02375	0.75	-0.8
2,500,815	-		MPMX19_02375	0.75	-0.8
2,500,815	-		MPMX19_02375	0.75	-1.1
2,500,815	-		MPMX19_02375	0.75	-0.2
2,500,815	-		MPMX19_02375	0.75	-0.2
2,500,982	+		MPMX19_02375	0.90	-0.6
2,500,982	+		MPMX19_02375	0.90	+0.7
2,500,982	+		MPMX19_02375	0.90	-0.3
2,500,982	+		MPMX19_02375	0.90	-1.2
2,500,982	+		MPMX19_02375	0.90	-1.3
2,500,982	+		MPMX19_02375	0.90	-0.6
2,500,982	+		MPMX19_02375	0.90	+0.8
2,500,983	-				+0.4
2,500,983	-				-1.6
2,500,983	-				-1.0
2,500,983	-				-1.7
2,500,983	-				-1.5
2,500,983	-				-0.7
2,500,983	-				-0.3
2,501,229	+		MPMX19_02376	0.57	-0.4
2,501,229	+		MPMX19_02376	0.57	-0.0
2,501,229	+		MPMX19_02376	0.57	-1.1
2,501,229	+		MPMX19_02376	0.57	+1.2
2,501,229	+		MPMX19_02376	0.57	-0.1
2,501,230	-		MPMX19_02376	0.57	-0.3
2,501,230	-		MPMX19_02376	0.57	+0.2
2,501,251	+		MPMX19_02376	0.67	-0.3
2,501,251	+		MPMX19_02376	0.67	-0.6
2,501,251	+		MPMX19_02376	0.67	+1.0
2,501,252	-		MPMX19_02376	0.67	-0.8
2,501,252	-		MPMX19_02376	0.67	-1.2
2,501,252	-		MPMX19_02376	0.67	-0.5
2,501,252	-		MPMX19_02376	0.67	-0.1
2,501,252	-		MPMX19_02376	0.67	-1.1
2,501,252	-		MPMX19_02376	0.67	-1.0
2,501,252	-		MPMX19_02376	0.67	-0.8
2,501,253	+		MPMX19_02376	0.68	+0.2
2,501,253	+		MPMX19_02376	0.68	-2.7
2,501,253	+		MPMX19_02376	0.68	+0.1
2,501,254	-		MPMX19_02376	0.68	-1.5
2,501,254	-		MPMX19_02376	0.68	-1.7
2,501,254	-		MPMX19_02376	0.68	-0.1
2,501,254	-		MPMX19_02376	0.68	-1.6
2,501,254	-		MPMX19_02376	0.68	-1.1
2,501,254	-		MPMX19_02376	0.68	+1.1
2,501,289	+		MPMX19_02376	0.84	-0.7
2,501,289	+		MPMX19_02376	0.84	+0.0
2,501,289	+		MPMX19_02376	0.84	-0.9
2,501,290	-		MPMX19_02376	0.84	-1.9
2,501,290	-		MPMX19_02376	0.84	-0.1
2,501,290	-		MPMX19_02376	0.84	-0.8
2,501,290	-		MPMX19_02376	0.84	-1.1
2,501,290	-		MPMX19_02376	0.84	-0.1
2,501,323	+				-1.2
2,501,323	+				+0.1
2,501,384	+				-0.9
2,501,492	+				-1.3
2,501,492	+				-0.9
2,501,492	+				+0.9
2,501,492	+				-1.1
2,501,492	+				-1.0
2,501,492	+				-2.2
2,501,492	+				-1.1
2,501,492	+				-1.2
2,501,492	+				-1.5
2,501,492	+				-1.2
2,501,492	+				-0.6
2,501,492	+				-0.4
2,501,492	+				+0.8
2,501,492	+				+2.7
2,501,492	+				-0.8
2,501,492	+				-1.5
2,501,493	-				+0.1
2,501,493	-				+0.0
2,501,493	-				-0.8
2,501,493	-				-0.1
2,501,493	-				+0.2
2,501,493	-				+1.0
2,501,493	-				+0.4
2,501,493	-				+0.4
2,501,493	-				+1.7
2,501,493	-				+0.5
2,501,717	+				-0.2
2,501,717	+				-1.1
2,501,717	+				+1.0
2,501,717	+				-1.2
2,501,717	+				-0.3
2,501,717	+				+2.8
2,501,718	-				+0.2
2,501,718	-				+0.4
2,501,718	-				-0.2
2,501,718	-				-1.0
2,501,718	-				+1.0
2,501,839	+				-0.1
2,501,839	+				+0.0
2,501,839	+				+0.2
2,501,840	-				+0.1
2,501,891	+				-2.2
2,501,892	-				-0.3
2,501,916	+				+0.0
2,501,916	+				-1.1
2,501,916	+				-0.5
2,501,917	-				-1.2
2,501,917	-				+0.6
2,501,926	+				-1.3
2,501,951	-				-0.3
2,501,956	+				-0.6
2,501,963	-				+0.4
2,501,992	+				-0.7
2,501,993	-				-0.5
2,501,993	-				+0.2
2,501,993	-				-0.8