Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02352

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,476,099	+				-1.7
2,476,099	+				-1.1
2,476,099	+				-0.6
2,476,100	-				-0.3
2,476,100	-				-1.9
2,476,145	+				+0.2
2,476,145	+				-0.3
2,476,145	+				-1.5
2,476,145	+				-1.2
2,476,145	+				-0.3
2,476,146	-				-1.2
2,476,146	-				-2.4
2,476,146	-				-1.3
2,476,146	-				-1.8
2,477,004	+		MPMX19_02352	0.47	+0.2
2,477,004	+		MPMX19_02352	0.47	-0.6
2,477,004	+		MPMX19_02352	0.47	-0.6
2,477,004	+		MPMX19_02352	0.47	+0.4
2,477,004	+		MPMX19_02352	0.47	+1.5
2,477,004	+		MPMX19_02352	0.47	-0.7
2,477,004	+		MPMX19_02352	0.47	-0.9
2,477,004	+		MPMX19_02352	0.47	+0.6
2,477,004	+		MPMX19_02352	0.47	-1.0
2,477,004	+		MPMX19_02352	0.47	-0.3
2,477,004	+		MPMX19_02352	0.47	+0.6
2,477,004	+		MPMX19_02352	0.47	+0.2
2,477,004	+		MPMX19_02352	0.47	+0.9
2,477,004	+		MPMX19_02352	0.47	+0.4
2,477,004	+		MPMX19_02352	0.47	-0.4
2,477,004	+		MPMX19_02352	0.47	+0.2
2,477,004	+		MPMX19_02352	0.47	-0.1
2,477,004	+		MPMX19_02352	0.47	-1.4
2,477,004	+		MPMX19_02352	0.47	-1.2
2,477,004	+		MPMX19_02352	0.47	+0.2
2,477,004	+		MPMX19_02352	0.47	+0.1
2,477,004	+		MPMX19_02352	0.47	-2.1
2,477,004	+		MPMX19_02352	0.47	+1.5
2,477,004	+		MPMX19_02352	0.47	-0.8
2,477,004	+		MPMX19_02352	0.47	+0.6
2,477,004	+		MPMX19_02352	0.47	+1.6
2,477,004	+		MPMX19_02352	0.47	+0.4
2,477,004	+		MPMX19_02352	0.47	-0.6
2,477,004	+		MPMX19_02352	0.47	-0.1
2,477,004	+		MPMX19_02352	0.47	-2.0
2,477,005	-		MPMX19_02352	0.47	+0.2
2,477,005	-		MPMX19_02352	0.47	-1.4
2,477,005	-		MPMX19_02352	0.47	-1.5
2,477,005	-		MPMX19_02352	0.47	+0.1
2,477,005	-		MPMX19_02352	0.47	-0.1
2,477,005	-		MPMX19_02352	0.47	+0.2
2,477,005	-		MPMX19_02352	0.47	+0.4
2,477,005	-		MPMX19_02352	0.47	-0.6
2,477,005	-		MPMX19_02352	0.47	-1.5
2,477,005	-		MPMX19_02352	0.47	+0.4
2,477,005	-		MPMX19_02352	0.47	+0.6
2,477,005	-		MPMX19_02352	0.47	-0.6
2,477,005	-		MPMX19_02352	0.47	-2.4
2,477,005	-		MPMX19_02352	0.47	-0.2
2,477,005	-		MPMX19_02352	0.47	-0.2
2,477,005	-		MPMX19_02352	0.47	-1.9
2,477,005	-		MPMX19_02352	0.47	-1.8
2,477,005	-		MPMX19_02352	0.47	-0.8
2,477,005	-		MPMX19_02352	0.47	+2.6
2,477,005	-		MPMX19_02352	0.47	-0.5
2,477,005	-		MPMX19_02352	0.47	+0.1
2,477,005	-		MPMX19_02352	0.47	-2.4
2,477,005	-		MPMX19_02352	0.47	+0.6
2,477,005	-		MPMX19_02352	0.47	-1.0
2,477,005	-		MPMX19_02352	0.47	+0.1
2,477,005	-		MPMX19_02352	0.47	-0.6
2,477,005	-		MPMX19_02352	0.47	-2.1
2,477,005	-		MPMX19_02352	0.47	-1.3
2,477,005	-		MPMX19_02352	0.47	-0.4
2,477,005	-		MPMX19_02352	0.47	+0.1
2,477,005	-		MPMX19_02352	0.47	+1.2
2,477,005	-		MPMX19_02352	0.47	-0.1
2,477,005	-		MPMX19_02352	0.47	-0.1
2,477,067	+		MPMX19_02352	0.69	+0.0
2,477,067	+		MPMX19_02352	0.69	-1.9
2,477,067	+		MPMX19_02352	0.69	+1.4
2,477,067	+		MPMX19_02352	0.69	-0.2
2,477,067	+		MPMX19_02352	0.69	-0.6
2,477,067	+		MPMX19_02352	0.69	-1.5
2,477,067	+		MPMX19_02352	0.69	+0.6
2,477,067	+		MPMX19_02352	0.69	+0.5
2,477,067	+		MPMX19_02352	0.69	-0.1
2,477,067	+		MPMX19_02352	0.69	-1.1
2,477,067	+		MPMX19_02352	0.69	+0.3
2,477,067	+		MPMX19_02352	0.69	-1.8
2,477,067	+		MPMX19_02352	0.69	+0.2
2,477,067	+		MPMX19_02352	0.69	+0.9
2,477,067	+		MPMX19_02352	0.69	-1.8
2,477,067	+		MPMX19_02352	0.69	+0.6
2,477,067	+		MPMX19_02352	0.69	+0.6
2,477,067	+		MPMX19_02352	0.69	-1.2
2,477,067	+		MPMX19_02352	0.69	-0.4
2,477,067	+		MPMX19_02352	0.69	-0.1
2,477,067	+		MPMX19_02352	0.69	+0.4
2,477,067	+		MPMX19_02352	0.69	+0.1
2,477,067	+		MPMX19_02352	0.69	-0.1
2,477,067	+		MPMX19_02352	0.69	-1.6
2,477,067	+		MPMX19_02352	0.69	-0.8
2,477,067	+		MPMX19_02352	0.69	+0.2
2,477,067	+		MPMX19_02352	0.69	-0.5
2,477,067	+		MPMX19_02352	0.69	-0.4
2,477,067	+		MPMX19_02352	0.69	-1.2
2,477,067	+		MPMX19_02352	0.69	+0.1
2,477,067	+		MPMX19_02352	0.69	-0.9
2,477,067	+		MPMX19_02352	0.69	-1.2
2,477,067	+		MPMX19_02352	0.69	-0.6
2,477,068	-		MPMX19_02352	0.69	+0.2
2,477,068	-		MPMX19_02352	0.69	-0.1
2,477,068	-		MPMX19_02352	0.69	+0.4
2,477,068	-		MPMX19_02352	0.69	-0.9
2,477,068	-		MPMX19_02352	0.69	+0.4
2,477,068	-		MPMX19_02352	0.69	-1.6
2,477,068	-		MPMX19_02352	0.69	+0.1
2,477,068	-		MPMX19_02352	0.69	+0.7
2,477,068	-		MPMX19_02352	0.69	-1.9
2,477,068	-		MPMX19_02352	0.69	-1.0
2,477,068	-		MPMX19_02352	0.69	+1.2
2,477,068	-		MPMX19_02352	0.69	-1.7
2,477,068	-		MPMX19_02352	0.69	-0.2
2,477,068	-		MPMX19_02352	0.69	+0.6
2,477,068	-		MPMX19_02352	0.69	-0.1
2,477,068	-		MPMX19_02352	0.69	+0.6
2,477,068	-		MPMX19_02352	0.69	+1.2
2,477,068	-		MPMX19_02352	0.69	-1.2
2,477,068	-		MPMX19_02352	0.69	-1.4
2,477,231	+		MPMX19_02353	0.20	+0.5
2,477,231	+		MPMX19_02353	0.20	-0.4
2,477,231	+		MPMX19_02353	0.20	+1.0
2,477,231	+		MPMX19_02353	0.20	-0.1
2,477,231	+		MPMX19_02353	0.20	+0.5
2,477,231	+		MPMX19_02353	0.20	-0.4
2,477,231	+		MPMX19_02353	0.20	-1.2
2,477,231	+		MPMX19_02353	0.20	-0.4
2,477,231	+		MPMX19_02353	0.20	+0.1
2,477,232	-		MPMX19_02353	0.21	-0.5
2,477,232	-		MPMX19_02353	0.21	+0.6
2,477,232	-		MPMX19_02353	0.21	-0.1
2,477,232	-		MPMX19_02353	0.21	+0.1
2,477,232	-		MPMX19_02353	0.21	-0.4
2,477,232	-		MPMX19_02353	0.21	-1.4
2,477,232	-		MPMX19_02353	0.21	-2.4
2,477,330	+		MPMX19_02353	0.46	+1.5
2,477,330	+		MPMX19_02353	0.46	-1.0
2,477,782	+		MPMX19_02354	0.26	-0.4
2,477,783	-		MPMX19_02354	0.26	+1.0
2,477,814	+		MPMX19_02354	0.29	+1.0
2,477,815	-		MPMX19_02354	0.29	+1.4
2,477,815	-		MPMX19_02354	0.29	+1.0
2,477,815	-		MPMX19_02354	0.29	-1.1
2,477,834	+		MPMX19_02354	0.31	-1.0
2,477,868	+		MPMX19_02354	0.34	-0.3
2,477,868	+		MPMX19_02354	0.34	-2.1
2,477,868	+		MPMX19_02354	0.34	-1.4
2,477,868	+		MPMX19_02354	0.34	+0.1
2,477,868	+		MPMX19_02354	0.34	-0.2
2,477,868	+		MPMX19_02354	0.34	+0.2
2,477,868	+		MPMX19_02354	0.34	-0.1
2,477,868	+		MPMX19_02354	0.34	-1.1
2,477,868	+		MPMX19_02354	0.34	-1.0
2,477,868	+		MPMX19_02354	0.34	-0.7
2,477,868	+		MPMX19_02354	0.34	-2.4
2,477,868	+		MPMX19_02354	0.34	+0.4
2,477,868	+		MPMX19_02354	0.34	-2.0
2,477,868	+		MPMX19_02354	0.34	+1.2
2,477,869	-		MPMX19_02354	0.35	-1.3
2,477,869	-		MPMX19_02354	0.35	+0.7
2,477,869	-		MPMX19_02354	0.35	+0.0
2,477,869	-		MPMX19_02354	0.35	+0.8
2,477,869	-		MPMX19_02354	0.35	-1.4
2,477,869	-		MPMX19_02354	0.35	-0.5
2,477,869	-		MPMX19_02354	0.35	+2.2
2,477,869	-		MPMX19_02354	0.35	-0.6
2,477,869	-		MPMX19_02354	0.35	+0.1
2,477,869	-		MPMX19_02354	0.35	-1.9
2,477,869	-		MPMX19_02354	0.35	+0.3
2,477,869	-		MPMX19_02354	0.35	-1.2
2,477,899	+		MPMX19_02354	0.38	-0.1
2,477,899	+		MPMX19_02354	0.38	-1.2
2,477,899	+		MPMX19_02354	0.38	+0.9
2,477,900	-		MPMX19_02354	0.38	-1.8
2,477,900	-		MPMX19_02354	0.38	-0.4
2,477,900	-		MPMX19_02354	0.38	-1.1
2,477,900	-		MPMX19_02354	0.38	+0.1
2,477,900	-		MPMX19_02354	0.38	-0.2
2,477,900	-		MPMX19_02354	0.38	-0.1
2,477,969	+		MPMX19_02354	0.45	+2.2
2,477,969	+		MPMX19_02354	0.45	-0.1
2,477,969	+		MPMX19_02354	0.45	-0.1
2,477,969	+		MPMX19_02354	0.45	-1.5
2,477,969	+		MPMX19_02354	0.45	+0.6
2,477,970	-		MPMX19_02354	0.45	-1.6