Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02338

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,462,520	+		MPMX19_02337	0.33	+1.4
2,462,520	+		MPMX19_02337	0.33	+0.4
2,462,520	+		MPMX19_02337	0.33	-1.2
2,462,521	-		MPMX19_02337	0.34	-1.2
2,462,521	-		MPMX19_02337	0.34	-1.6
2,462,521	-		MPMX19_02337	0.34	+1.1
2,462,521	-		MPMX19_02337	0.34	-0.6
2,462,521	-		MPMX19_02337	0.34	-1.7
2,462,521	-		MPMX19_02337	0.34	+0.3
2,462,521	-		MPMX19_02337	0.34	-0.1
2,462,736	+		MPMX19_02337	0.59	-0.9
2,462,736	+		MPMX19_02337	0.59	-0.4
2,462,736	+		MPMX19_02337	0.59	-0.4
2,462,736	+		MPMX19_02337	0.59	-0.8
2,462,736	+		MPMX19_02337	0.59	+0.9
2,462,737	-		MPMX19_02337	0.59	-0.9
2,462,737	-		MPMX19_02337	0.59	-0.1
2,462,737	-		MPMX19_02337	0.59	+0.4
2,462,737	-		MPMX19_02337	0.59	-0.6
2,462,737	-		MPMX19_02337	0.59	-0.2
2,462,737	-		MPMX19_02337	0.59	+2.8
2,462,737	-		MPMX19_02337	0.59	+0.1
2,462,737	-		MPMX19_02337	0.59	+1.5
2,462,746	+		MPMX19_02337	0.60	-1.1
2,462,746	+		MPMX19_02337	0.60	-1.6
2,462,747	-		MPMX19_02337	0.60	+0.2
2,462,747	-		MPMX19_02337	0.60	-1.5
2,462,747	-		MPMX19_02337	0.60	-0.0
2,462,805	+		MPMX19_02337	0.67	+0.6
2,462,805	+		MPMX19_02337	0.67	-0.5
2,462,805	+		MPMX19_02337	0.67	+0.6
2,462,805	+		MPMX19_02337	0.67	+0.2
2,462,805	+		MPMX19_02337	0.67	-0.1
2,462,805	+		MPMX19_02337	0.67	-0.5
2,462,806	-		MPMX19_02337	0.67	-0.8
2,462,806	-		MPMX19_02337	0.67	+0.0
2,462,806	-		MPMX19_02337	0.67	+1.1
2,463,137	+				+0.2
2,463,183	+				-0.1
2,463,183	+				+0.4
2,463,183	+				+0.9
2,463,183	+				-0.9
2,463,183	+				-0.1
2,463,184	-				+0.6
2,463,184	-				+0.1
2,463,184	-				+0.4
2,463,213	+				-0.4
2,463,280	+				-0.1
2,463,280	+				-1.4
2,463,280	+				+0.5
2,463,280	+				+0.6
2,463,280	+				-1.4
2,463,280	+				+0.9
2,463,280	+				-0.3
2,463,280	+				-0.7
2,463,280	+				-0.0
2,463,280	+				-1.5
2,463,280	+				-1.7
2,463,280	+				+0.6
2,463,280	+				-0.6
2,463,280	+				-1.2
2,463,280	+				+0.1
2,463,280	+				-0.8
2,463,280	+				+0.4
2,463,281	-				-0.9
2,463,281	-				-0.1
2,463,281	-				-0.1
2,463,281	-				-0.6
2,463,281	-				-0.2
2,463,281	-				+1.6
2,463,281	-				-0.4
2,463,281	-				+0.5
2,463,281	-				+0.4
2,463,307	+		MPMX19_02338	0.11	-1.1
2,463,307	+		MPMX19_02338	0.11	+0.2
2,463,307	+		MPMX19_02338	0.11	-1.9
2,463,307	+		MPMX19_02338	0.11	+1.0
2,463,307	+		MPMX19_02338	0.11	-1.4
2,463,307	+		MPMX19_02338	0.11	+0.3
2,463,307	+		MPMX19_02338	0.11	-1.6
2,463,307	+		MPMX19_02338	0.11	-0.9
2,463,307	+		MPMX19_02338	0.11	-0.5
2,463,307	+		MPMX19_02338	0.11	+0.6
2,463,307	+		MPMX19_02338	0.11	-0.6
2,463,307	+		MPMX19_02338	0.11	-1.6
2,463,307	+		MPMX19_02338	0.11	-1.0
2,463,307	+		MPMX19_02338	0.11	-0.6
2,463,307	+		MPMX19_02338	0.11	-0.9
2,463,307	+		MPMX19_02338	0.11	-0.5
2,463,308	-		MPMX19_02338	0.12	+0.9
2,463,308	-		MPMX19_02338	0.12	-1.2
2,463,308	-		MPMX19_02338	0.12	-0.4
2,463,308	-		MPMX19_02338	0.12	-1.1
2,463,308	-		MPMX19_02338	0.12	-0.6
2,463,308	-		MPMX19_02338	0.12	+0.0
2,463,308	-		MPMX19_02338	0.12	-1.9
2,463,308	-		MPMX19_02338	0.12	-0.5
2,463,308	-		MPMX19_02338	0.12	-0.7
2,463,308	-		MPMX19_02338	0.12	-1.4
2,463,308	-		MPMX19_02338	0.12	-1.2
2,463,490	+		MPMX19_02338	0.60	-0.4
2,463,490	+		MPMX19_02338	0.60	-0.3
2,463,490	+		MPMX19_02338	0.60	-0.1
2,463,490	+		MPMX19_02338	0.60	-0.5
2,463,490	+		MPMX19_02338	0.60	-0.2
2,463,490	+		MPMX19_02338	0.60	-0.2
2,463,490	+		MPMX19_02338	0.60	-2.4
2,463,490	+		MPMX19_02338	0.60	+0.5
2,463,490	+		MPMX19_02338	0.60	+0.2
2,463,490	+		MPMX19_02338	0.60	+0.9
2,463,490	+		MPMX19_02338	0.60	-0.9
2,463,490	+		MPMX19_02338	0.60	+2.8
2,463,490	+		MPMX19_02338	0.60	-2.2
2,463,490	+		MPMX19_02338	0.60	-0.1
2,463,490	+		MPMX19_02338	0.60	-1.4
2,463,490	+		MPMX19_02338	0.60	-0.6
2,463,490	+		MPMX19_02338	0.60	-0.7
2,463,490	+		MPMX19_02338	0.60	-0.4
2,463,490	+		MPMX19_02338	0.60	+0.1
2,463,491	-		MPMX19_02338	0.60	-0.6
2,463,491	-		MPMX19_02338	0.60	-1.1
2,463,491	-		MPMX19_02338	0.60	-0.5
2,463,491	-		MPMX19_02338	0.60	-1.9
2,463,491	-		MPMX19_02338	0.60	-0.6
2,463,491	-		MPMX19_02338	0.60	+0.0
2,463,491	-		MPMX19_02338	0.60	-0.4
2,463,491	-		MPMX19_02338	0.60	-2.7
2,463,491	-		MPMX19_02338	0.60	-1.9
2,463,491	-		MPMX19_02338	0.60	-0.4
2,463,491	-		MPMX19_02338	0.60	-0.7
2,463,491	-		MPMX19_02338	0.60	-0.5
2,463,491	-		MPMX19_02338	0.60	-0.1
2,463,491	-		MPMX19_02338	0.60	-1.5
2,463,547	+		MPMX19_02338	0.75	-1.6
2,463,547	+		MPMX19_02338	0.75	+0.6
2,463,547	+		MPMX19_02338	0.75	-0.4
2,463,547	+		MPMX19_02338	0.75	+0.5
2,463,547	+		MPMX19_02338	0.75	-0.8
2,463,547	+		MPMX19_02338	0.75	-0.2
2,463,547	+		MPMX19_02338	0.75	+0.6
2,463,548	-		MPMX19_02338	0.75	+0.2
2,463,548	-		MPMX19_02338	0.75	+0.5
2,463,548	-		MPMX19_02338	0.75	-0.1
2,463,548	-		MPMX19_02338	0.75	+0.2
2,463,548	-		MPMX19_02338	0.75	-2.2
2,463,548	-		MPMX19_02338	0.75	-1.1
2,463,548	-		MPMX19_02338	0.75	+0.6
2,463,670	+				+0.4
2,463,670	+				-1.7
2,463,670	+				+0.4
2,463,671	-				-0.1
2,463,750	+				-0.6
2,463,924	-				-0.6
2,463,982	+				-0.4
2,463,982	+				-1.2
2,463,983	-				-0.1
2,464,025	+				-0.6
2,464,025	+				-0.6
2,464,025	+				-2.1
2,464,025	+				-2.0
2,464,025	+				-0.1
2,464,025	+				-0.4
2,464,025	+				-0.7
2,464,025	+				+1.2
2,464,026	-				-1.5
2,464,026	-				-1.1
2,464,026	-				-0.1
2,464,026	-				+1.0
2,464,078	+				-1.1
2,464,078	+				-0.6
2,464,078	+				+0.1
2,464,078	+				-1.5
2,464,078	+				-2.2
2,464,078	+				-0.1
2,464,078	+				-0.8
2,464,078	+				-1.1
2,464,078	+				+0.6
2,464,078	+				-1.5
2,464,078	+				+0.1
2,464,079	-				-1.2
2,464,079	-				-1.1
2,464,079	-				-0.4
2,464,079	-				-1.6
2,464,079	-				-0.1
2,464,079	-				-2.2
2,464,079	-				-2.0
2,464,079	-				-0.1
2,464,079	-				-2.2
2,464,114	+				-0.5
2,464,114	+				-0.6
2,464,114	+				-1.9
2,464,114	+				+0.4
2,464,114	+				+0.1
2,464,114	+				+0.4
2,464,114	+				-0.6
2,464,114	+				-0.9
2,464,114	+				-1.2
2,464,114	+				-0.8
2,464,114	+				-0.8
2,464,114	+				-1.7
2,464,114	+				+1.5
2,464,114	+				-0.9
2,464,114	+				-1.6
2,464,114	+				-0.9
2,464,114	+				+0.5
2,464,114	+				-0.9
2,464,114	+				+0.2
2,464,114	+				-0.4
2,464,114	+				-0.4
2,464,114	+				+0.1
2,464,114	+				-0.7
2,464,114	+				+0.0
2,464,114	+				-0.7
2,464,114	+				-0.4
2,464,115	-				-1.2
2,464,115	-				-1.0
2,464,115	-				+1.0
2,464,115	-				+0.2
2,464,115	-				-0.8
2,464,115	-				+0.1
2,464,115	-				-1.6
2,464,115	-				+0.2
2,464,115	-				+1.4
2,464,115	-				+0.2
2,464,115	-				+0.2
2,464,115	-				-1.4
2,464,115	-				+2.2
2,464,115	-				-1.2
2,464,115	-				-0.4
2,464,115	-				-1.5
2,464,115	-				+0.1
2,464,115	-				+0.2
2,464,115	-				-0.0
2,464,115	-				+0.9
2,464,115	-				-0.1
2,464,115	-				-0.4
2,464,115	-				-0.4
2,464,115	-				+0.2
2,464,133	+				-0.7
2,464,133	+				-0.4
2,464,133	+				+0.6
2,464,133	+				-0.5
2,464,133	+				-1.5
2,464,133	+				-1.6
2,464,133	+				-1.1
2,464,133	+				-0.9
2,464,133	+				-1.0
2,464,133	+				-0.6
2,464,133	+				-2.4
2,464,133	+				-1.6
2,464,133	+				-0.1
2,464,134	-				-1.1
2,464,134	-				-0.9
2,464,134	-				-0.3
2,464,134	-				-0.4
2,464,134	-				-2.1
2,464,134	-				-0.7
2,464,134	-				-0.1
2,464,134	-				-1.2
2,464,134	-				-1.2
2,464,134	-				-0.8
2,464,137	+				-0.1
2,464,137	+				-0.1
2,464,137	+				+0.6
2,464,137	+				-0.6
2,464,137	+				-0.7
2,464,137	+				-1.0
2,464,137	+				-0.9
2,464,137	+				+0.1
2,464,138	-				+0.4
2,464,138	-				-0.3
2,464,138	-				-1.9
2,464,138	-				-0.9
2,464,138	-				+1.7
2,464,138	-				-1.0
2,464,138	-				+0.6
2,464,138	-				-2.0
2,464,138	-				-1.0
2,464,138	-				-2.1
2,464,158	+				+0.1
2,464,158	+				-0.8
2,464,158	+				+0.0
2,464,158	+				-2.0
2,464,158	+				-0.7
2,464,158	+				+1.1
2,464,159	-				+1.0
2,464,159	-				+0.6
2,464,159	-				-1.6
2,464,159	-				-1.2
2,464,159	-				-0.4
2,464,159	-				+0.4
2,464,159	-				-1.5
2,464,159	-				-0.4
2,464,159	-				-0.9
2,464,159	-				-0.4
2,464,159	-				-0.4
2,464,308	-				-0.1
2,464,382	+				-0.9
2,464,382	+				+0.2
2,464,382	+				-1.2
2,464,382	+				+0.4
2,464,383	-				-0.4
2,464,383	-				-1.2
2,464,383	-				-1.2
2,464,383	-				+0.2
2,464,391	+				-0.9
2,464,443	+				+0.6
2,464,443	+				-0.9
2,464,443	+				-1.6
2,464,443	+				+0.4
2,464,443	+				-0.8
2,464,443	+				-1.5
2,464,443	+				+1.0
2,464,444	-				+0.4
2,464,444	-				-1.4
2,464,444	-				-0.4
2,464,444	-				+1.0
2,464,444	-				+0.8
2,464,444	-				-0.9
2,464,444	-				+0.4
2,464,444	-				-0.2
2,464,530	+		MPMX19_02339	0.29	+0.5
2,464,530	+		MPMX19_02339	0.29	-0.7
2,464,530	+		MPMX19_02339	0.29	-0.2
2,464,530	+		MPMX19_02339	0.29	-1.0
2,464,531	-		MPMX19_02339	0.29	+0.9
2,464,567	+		MPMX19_02339	0.39	-1.2
2,464,567	+		MPMX19_02339	0.39	-0.3
2,464,568	-		MPMX19_02339	0.39	+0.6
2,464,568	-		MPMX19_02339	0.39	+0.2
2,464,608	+		MPMX19_02339	0.50	+0.9
2,464,608	+		MPMX19_02339	0.50	+0.1
2,464,608	+		MPMX19_02339	0.50	-0.1
2,464,608	+		MPMX19_02339	0.50	-1.6
2,464,608	+		MPMX19_02339	0.50	-0.1
2,464,608	+		MPMX19_02339	0.50	+0.3
2,464,608	+		MPMX19_02339	0.50	-0.8
2,464,608	+		MPMX19_02339	0.50	-1.9
2,464,608	+		MPMX19_02339	0.50	-0.9
2,464,608	+		MPMX19_02339	0.50	+0.2
2,464,608	+		MPMX19_02339	0.50	+0.5
2,464,608	+		MPMX19_02339	0.50	-0.4
2,464,608	+		MPMX19_02339	0.50	-0.6
2,464,608	+		MPMX19_02339	0.50	-0.2
2,464,608	+		MPMX19_02339	0.50	-0.5
2,464,608	+		MPMX19_02339	0.50	-0.6
2,464,608	+		MPMX19_02339	0.50	+1.8
2,464,608	+		MPMX19_02339	0.50	-0.4
2,464,608	+		MPMX19_02339	0.50	-0.3
2,464,608	+		MPMX19_02339	0.50	-0.5
2,464,608	+		MPMX19_02339	0.50	+0.1
2,464,608	+		MPMX19_02339	0.50	-0.8
2,464,608	+		MPMX19_02339	0.50	-1.1
2,464,609	-		MPMX19_02339	0.50	-1.9
2,464,609	-		MPMX19_02339	0.50	+0.2
2,464,609	-		MPMX19_02339	0.50	+0.6
2,464,609	-		MPMX19_02339	0.50	-0.1
2,464,609	-		MPMX19_02339	0.50	-0.6
2,464,609	-		MPMX19_02339	0.50	-0.9
2,464,609	-		MPMX19_02339	0.50	-1.2
2,464,609	-		MPMX19_02339	0.50	-0.4
2,464,609	-		MPMX19_02339	0.50	+0.2
2,464,609	-		MPMX19_02339	0.50	+0.6
2,464,633	+		MPMX19_02339	0.57	-0.9
2,464,633	+		MPMX19_02339	0.57	+0.3
2,464,634	-		MPMX19_02339	0.57	-0.1
2,464,634	-		MPMX19_02339	0.57	-0.6