Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02319

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,438,575	+		MPMX19_02317	0.88	+0.4
2,438,575	+		MPMX19_02317	0.88	-0.8
2,438,575	+		MPMX19_02317	0.88	-0.9
2,438,575	+		MPMX19_02317	0.88	-1.2
2,438,575	+		MPMX19_02317	0.88	-1.6
2,438,575	+		MPMX19_02317	0.88	+0.2
2,438,575	+		MPMX19_02317	0.88	-0.3
2,438,575	+		MPMX19_02317	0.88	-0.9
2,438,575	+		MPMX19_02317	0.88	-1.4
2,438,575	+		MPMX19_02317	0.88	+0.2
2,438,576	-		MPMX19_02317	0.88	-0.6
2,438,576	-		MPMX19_02317	0.88	-3.1
2,438,576	-		MPMX19_02317	0.88	-0.8
2,438,576	-		MPMX19_02317	0.88	-0.8
2,438,581	+		MPMX19_02317	0.89	-1.4
2,438,581	+		MPMX19_02317	0.89	-0.3
2,438,581	+		MPMX19_02317	0.89	+0.2
2,438,581	+		MPMX19_02317	0.89	-1.0
2,438,581	+		MPMX19_02317	0.89	+0.1
2,438,581	+		MPMX19_02317	0.89	-1.4
2,438,581	+		MPMX19_02317	0.89	-0.2
2,438,581	+		MPMX19_02317	0.89	-1.2
2,438,581	+		MPMX19_02317	0.89	-1.5
2,438,581	+		MPMX19_02317	0.89	-1.6
2,438,582	+		MPMX19_02317	0.89	-1.6
2,438,582	-		MPMX19_02317	0.89	-1.2
2,438,582	-		MPMX19_02317	0.89	+0.1
2,438,582	-		MPMX19_02317	0.89	+0.6
2,438,582	-		MPMX19_02317	0.89	-1.2
2,438,582	-		MPMX19_02317	0.89	+0.2
2,438,582	-		MPMX19_02317	0.89	+0.6
2,438,582	-		MPMX19_02317	0.89	+1.2
2,438,582	-		MPMX19_02317	0.89	-0.4
2,438,582	-		MPMX19_02317	0.89	+0.5
2,438,582	-		MPMX19_02317	0.89	-0.1
2,438,735	+				-0.4
2,438,735	+				-0.7
2,438,735	+				+0.2
2,438,735	+				-0.1
2,438,735	+				-0.5
2,438,735	+				-0.8
2,438,735	+				-1.6
2,438,736	-				+0.1
2,438,736	-				-1.4
2,438,736	-				-0.4
2,438,736	-				-1.8
2,438,736	-				+0.1
2,438,736	-				-0.8
2,438,736	-				+0.3
2,438,736	-				-0.2
2,438,810	+		MPMX19_02318	0.27	+1.7
2,439,048	+		MPMX19_02318	0.84	+0.5
2,439,048	+		MPMX19_02318	0.84	+1.8
2,439,048	+		MPMX19_02318	0.84	-0.2
2,439,048	+		MPMX19_02318	0.84	+0.8
2,439,048	+		MPMX19_02318	0.84	-0.6
2,439,048	+		MPMX19_02318	0.84	-0.6
2,439,048	+		MPMX19_02318	0.84	+1.4
2,439,048	+		MPMX19_02318	0.84	+0.5
2,439,048	+		MPMX19_02318	0.84	-1.3
2,439,048	+		MPMX19_02318	0.84	-0.9
2,439,049	-		MPMX19_02318	0.85	-0.9
2,439,049	-		MPMX19_02318	0.85	+0.5
2,439,049	-		MPMX19_02318	0.85	-1.8
2,439,049	-		MPMX19_02318	0.85	-0.6
2,439,049	-		MPMX19_02318	0.85	+0.6
2,439,049	-		MPMX19_02318	0.85	+0.2
2,439,049	-		MPMX19_02318	0.85	-2.3
2,439,226	+				-1.5
2,439,226	+				-1.8
2,439,226	+				+0.8
2,439,226	+				-0.8
2,439,227	-				-0.2
2,439,227	-				-1.9
2,439,230	+				-0.4
2,439,230	+				-1.2
2,439,230	+				-0.6
2,439,230	+				-0.6
2,439,230	+				+1.0
2,439,230	+				+0.6
2,439,230	+				-0.2
2,439,230	+				+1.0
2,439,231	-				+0.2
2,439,231	-				+0.1
2,439,231	-				-1.0
2,439,231	-				-0.5
2,439,231	-				+0.0
2,439,231	-				-0.1
2,439,436	+		MPMX19_02319	0.16	-0.6
2,439,436	+		MPMX19_02319	0.16	-1.6
2,439,436	+		MPMX19_02319	0.16	-1.2
2,439,436	+		MPMX19_02319	0.16	-1.2
2,439,437	-		MPMX19_02319	0.16	+0.6
2,439,437	-		MPMX19_02319	0.16	-0.5
2,439,437	-		MPMX19_02319	0.16	-2.2
2,439,437	-		MPMX19_02319	0.16	-0.6
2,439,781	+		MPMX19_02319	0.44	-0.5
2,439,781	+		MPMX19_02319	0.44	+0.1
2,439,781	+		MPMX19_02319	0.44	-0.8
2,439,781	+		MPMX19_02319	0.44	-0.5
2,439,781	+		MPMX19_02319	0.44	-0.6
2,439,781	+		MPMX19_02319	0.44	-2.2
2,439,781	+		MPMX19_02319	0.44	-0.8
2,439,781	+		MPMX19_02319	0.44	+0.6
2,439,781	+		MPMX19_02319	0.44	+0.1
2,439,782	-		MPMX19_02319	0.44	-0.6
2,439,782	-		MPMX19_02319	0.44	-1.2
2,439,782	-		MPMX19_02319	0.44	-0.8
2,439,782	-		MPMX19_02319	0.44	-0.8
2,439,782	-		MPMX19_02319	0.44	-0.6
2,439,802	+		MPMX19_02319	0.46	-1.9
2,439,802	+		MPMX19_02319	0.46	-1.6
2,439,802	+		MPMX19_02319	0.46	+0.0
2,439,803	-		MPMX19_02319	0.46	+1.5
2,439,803	-		MPMX19_02319	0.46	-0.0
2,439,803	-		MPMX19_02319	0.46	-0.2
2,439,803	-		MPMX19_02319	0.46	-0.4
2,439,887	+		MPMX19_02319	0.53	+0.1
2,439,887	+		MPMX19_02319	0.53	+0.9
2,439,888	-		MPMX19_02319	0.53	-0.2
2,440,048	+		MPMX19_02319	0.66	-0.5
2,440,048	+		MPMX19_02319	0.66	-0.4
2,440,048	+		MPMX19_02319	0.66	+0.7
2,440,048	+		MPMX19_02319	0.66	-0.4
2,440,048	+		MPMX19_02319	0.66	-1.1
2,440,048	+		MPMX19_02319	0.66	+0.1
2,440,048	+		MPMX19_02319	0.66	-0.2
2,440,048	+		MPMX19_02319	0.66	+0.1
2,440,048	+		MPMX19_02319	0.66	-0.8
2,440,048	+		MPMX19_02319	0.66	-0.3
2,440,048	+		MPMX19_02319	0.66	+0.2
2,440,048	+		MPMX19_02319	0.66	-0.9
2,440,048	+		MPMX19_02319	0.66	-0.4
2,440,048	+		MPMX19_02319	0.66	-0.7
2,440,048	-		MPMX19_02319	0.66	+0.6
2,440,049	-		MPMX19_02319	0.66	-1.7
2,440,049	-		MPMX19_02319	0.66	-0.4
2,440,049	-		MPMX19_02319	0.66	-0.1
2,440,049	-		MPMX19_02319	0.66	-2.8
2,440,049	-		MPMX19_02319	0.66	+1.2
2,440,049	-		MPMX19_02319	0.66	-1.4
2,440,049	-		MPMX19_02319	0.66	-1.2
2,440,049	-		MPMX19_02319	0.66	-0.5
2,440,249	+		MPMX19_02319	0.82	-0.1
2,440,249	+		MPMX19_02319	0.82	-1.5
2,440,249	+		MPMX19_02319	0.82	-0.4
2,440,249	+		MPMX19_02319	0.82	-1.1
2,440,249	+		MPMX19_02319	0.82	-0.1
2,440,249	+		MPMX19_02319	0.82	+0.2
2,440,249	+		MPMX19_02319	0.82	-1.2
2,440,250	-		MPMX19_02319	0.82	-0.9
2,440,250	-		MPMX19_02319	0.82	+0.2
2,440,250	-		MPMX19_02319	0.82	-1.3
2,440,250	-		MPMX19_02319	0.82	-0.9
2,440,250	-		MPMX19_02319	0.82	-0.5
2,440,250	-		MPMX19_02319	0.82	+0.8
2,440,250	-		MPMX19_02319	0.82	-0.8
2,440,250	-		MPMX19_02319	0.82	+0.1
2,440,250	-		MPMX19_02319	0.82	-0.8
2,440,250	-		MPMX19_02319	0.82	+0.2
2,440,309	+		MPMX19_02319	0.87	-0.7
2,440,309	+		MPMX19_02319	0.87	-0.4
2,440,309	+		MPMX19_02319	0.87	+1.0
2,440,310	-		MPMX19_02319	0.87	-0.6
2,440,310	-		MPMX19_02319	0.87	-0.2
2,440,310	-		MPMX19_02319	0.87	-0.8
2,440,310	-		MPMX19_02319	0.87	-2.5
2,440,310	-		MPMX19_02319	0.87	-1.5
2,440,318	+		MPMX19_02319	0.88	+0.8
2,440,318	+		MPMX19_02319	0.88	-1.3
2,440,318	+		MPMX19_02319	0.88	-1.4
2,440,318	+		MPMX19_02319	0.88	-1.2
2,440,318	+		MPMX19_02319	0.88	+0.2
2,440,318	+		MPMX19_02319	0.88	+0.6
2,440,318	+		MPMX19_02319	0.88	-2.2
2,440,318	+		MPMX19_02319	0.88	-0.6
2,440,318	+		MPMX19_02319	0.88	+0.1
2,440,318	+		MPMX19_02319	0.88	-0.3
2,440,318	+		MPMX19_02319	0.88	-1.4
2,440,318	+		MPMX19_02319	0.88	-0.9
2,440,318	+		MPMX19_02319	0.88	-2.3
2,440,318	+		MPMX19_02319	0.88	+0.5
2,440,318	+		MPMX19_02319	0.88	-1.1
2,440,318	+		MPMX19_02319	0.88	-1.8
2,440,318	+		MPMX19_02319	0.88	-1.2
2,440,319	-		MPMX19_02319	0.88	-1.1
2,440,319	-		MPMX19_02319	0.88	+1.2
2,440,319	-		MPMX19_02319	0.88	-0.9
2,440,319	-		MPMX19_02319	0.88	+0.8
2,440,319	-		MPMX19_02319	0.88	+0.1
2,440,319	-		MPMX19_02319	0.88	-0.7
2,440,319	-		MPMX19_02319	0.88	-0.6
2,440,319	-		MPMX19_02319	0.88	-1.1
2,440,319	-		MPMX19_02319	0.88	-0.2
2,440,319	-		MPMX19_02319	0.88	+2.0
2,440,319	-		MPMX19_02319	0.88	+0.1
2,440,319	-		MPMX19_02319	0.88	-0.7
2,440,319	-		MPMX19_02319	0.88	-0.3
2,440,319	-		MPMX19_02319	0.88	+1.6
2,440,319	-		MPMX19_02319	0.88	-0.2
2,440,319	-		MPMX19_02319	0.88	-1.7
2,440,319	-		MPMX19_02319	0.88	+0.1
2,440,319	-		MPMX19_02319	0.88	-1.2
2,440,319	-		MPMX19_02319	0.88	-1.2
2,440,485	+				-0.6
2,440,603	+				-0.2
2,440,857	+		MPMX19_02320	0.21	-0.7
2,440,858	-		MPMX19_02320	0.21	-1.2
2,440,858	-		MPMX19_02320	0.21	-1.4
2,441,229	+		MPMX19_02320	0.60	-0.2
2,441,230	-		MPMX19_02320	0.60	+0.4