Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02272

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,391,572	+		MPMX19_02270	0.62	+0.6
2,391,572	+		MPMX19_02270	0.62	-0.9
2,391,572	+		MPMX19_02270	0.62	-0.4
2,391,572	+		MPMX19_02270	0.62	+0.5
2,391,572	+		MPMX19_02270	0.62	-2.0
2,391,572	+		MPMX19_02270	0.62	-0.8
2,391,572	+		MPMX19_02270	0.62	-1.4
2,391,572	+		MPMX19_02270	0.62	-0.4
2,391,572	+		MPMX19_02270	0.62	-1.1
2,391,572	+		MPMX19_02270	0.62	-0.1
2,391,572	+		MPMX19_02270	0.62	-1.2
2,391,572	+		MPMX19_02270	0.62	-0.3
2,391,572	+		MPMX19_02270	0.62	-2.8
2,391,572	+		MPMX19_02270	0.62	+0.4
2,391,572	+		MPMX19_02270	0.62	-0.1
2,391,573	-		MPMX19_02270	0.62	+1.5
2,391,573	-		MPMX19_02270	0.62	+0.5
2,391,573	-		MPMX19_02270	0.62	-1.1
2,391,573	-		MPMX19_02270	0.62	-0.8
2,391,573	-		MPMX19_02270	0.62	-0.8
2,391,573	-		MPMX19_02270	0.62	-0.8
2,391,573	-		MPMX19_02270	0.62	-0.4
2,391,573	-		MPMX19_02270	0.62	+0.9
2,391,573	-		MPMX19_02270	0.62	+0.1
2,391,573	-		MPMX19_02270	0.62	+0.5
2,391,573	-		MPMX19_02270	0.62	-2.1
2,391,573	-		MPMX19_02270	0.62	-1.7
2,391,573	-		MPMX19_02270	0.62	-0.6
2,391,573	-		MPMX19_02270	0.62	-1.7
2,391,573	-		MPMX19_02270	0.62	+0.1
2,391,573	-		MPMX19_02270	0.62	+0.4
2,391,573	-		MPMX19_02270	0.62	-1.2
2,391,573	-		MPMX19_02270	0.62	+0.8
2,391,573	-		MPMX19_02270	0.62	-1.5
2,391,573	-		MPMX19_02270	0.62	-2.6
2,391,573	-		MPMX19_02270	0.62	+0.3
2,391,573	-		MPMX19_02270	0.62	-0.4
2,391,575	+		MPMX19_02270	0.63	-1.9
2,391,575	+		MPMX19_02270	0.63	+1.2
2,391,575	+		MPMX19_02270	0.63	-1.4
2,391,576	-		MPMX19_02270	0.63	+0.4
2,391,625	+		MPMX19_02270	0.75	-0.8
2,391,626	-		MPMX19_02270	0.76	+0.1
2,391,626	-		MPMX19_02270	0.76	-1.8
2,391,659	+		MPMX19_02270	0.84	+0.2
2,391,659	+		MPMX19_02270	0.84	+1.8
2,391,659	+		MPMX19_02270	0.84	+0.1
2,391,660	-		MPMX19_02270	0.84	+0.2
2,391,660	-		MPMX19_02270	0.84	+0.2
2,391,660	-		MPMX19_02270	0.84	-0.9
2,391,660	-		MPMX19_02270	0.84	-1.2
2,391,660	-		MPMX19_02270	0.84	-1.4
2,391,671	+		MPMX19_02270	0.87	+0.4
2,391,671	+		MPMX19_02270	0.87	-0.1
2,391,671	+		MPMX19_02270	0.87	-0.6
2,391,671	+		MPMX19_02270	0.87	-0.6
2,391,671	+		MPMX19_02270	0.87	-1.5
2,391,671	+		MPMX19_02270	0.87	+0.0
2,391,672	-		MPMX19_02270	0.87	-0.1
2,391,672	-		MPMX19_02270	0.87	-1.9
2,391,672	-		MPMX19_02270	0.87	+0.6
2,391,672	-		MPMX19_02270	0.87	+0.6
2,391,672	-		MPMX19_02270	0.87	-0.1
2,391,672	-		MPMX19_02270	0.87	-0.8
2,391,672	-		MPMX19_02270	0.87	-1.2
2,391,672	-		MPMX19_02270	0.87	-0.8
2,391,672	-		MPMX19_02270	0.87	+0.9
2,391,672	-		MPMX19_02270	0.87	-1.0
2,391,672	-		MPMX19_02270	0.87	-1.4
2,391,672	-		MPMX19_02270	0.87	-1.4
2,391,781	+				-0.1
2,391,781	+				-1.0
2,391,781	+				-0.1
2,391,781	+				+1.0
2,391,781	+				-0.7
2,391,781	+				-0.6
2,391,781	+				-0.5
2,391,782	-				-1.6
2,391,782	-				-1.3
2,391,782	-				-0.3
2,391,782	-				-1.1
2,391,782	-				-0.8
2,391,782	-				+0.2
2,391,782	-				-0.7
2,391,976	+		MPMX19_02271	0.33	-1.3
2,391,976	+		MPMX19_02271	0.33	+0.9
2,391,976	+		MPMX19_02271	0.33	+0.4
2,391,976	+		MPMX19_02271	0.33	-0.1
2,391,976	+		MPMX19_02271	0.33	+1.4
2,391,976	+		MPMX19_02271	0.33	-0.0
2,391,976	+		MPMX19_02271	0.33	-1.8
2,391,976	+		MPMX19_02271	0.33	+0.8
2,391,977	-		MPMX19_02271	0.33	-0.1
2,391,977	-		MPMX19_02271	0.33	-0.2
2,391,977	-		MPMX19_02271	0.33	-2.1
2,391,977	-		MPMX19_02271	0.33	-2.0
2,391,977	-		MPMX19_02271	0.33	-0.7
2,391,977	-		MPMX19_02271	0.33	-0.8
2,391,977	-		MPMX19_02271	0.33	-0.4
2,392,072	+		MPMX19_02271	0.47	-0.8
2,392,072	+		MPMX19_02271	0.47	-0.4
2,392,072	+		MPMX19_02271	0.47	-1.0
2,392,072	+		MPMX19_02271	0.47	+0.2
2,392,072	+		MPMX19_02271	0.47	-1.1
2,392,072	+		MPMX19_02271	0.47	-1.3
2,392,072	+		MPMX19_02271	0.47	-1.6
2,392,072	+		MPMX19_02271	0.47	-0.8
2,392,072	+		MPMX19_02271	0.47	+0.1
2,392,072	+		MPMX19_02271	0.47	-0.6
2,392,072	+		MPMX19_02271	0.47	-1.0
2,392,072	+		MPMX19_02271	0.47	-1.4
2,392,073	-		MPMX19_02271	0.48	+0.4
2,392,073	-		MPMX19_02271	0.48	-0.1
2,392,073	-		MPMX19_02271	0.48	+0.1
2,392,073	-		MPMX19_02271	0.48	-0.2
2,392,073	-		MPMX19_02271	0.48	-0.5
2,392,073	-		MPMX19_02271	0.48	-1.4
2,392,073	-		MPMX19_02271	0.48	+0.2
2,392,073	-		MPMX19_02271	0.48	-1.5
2,392,073	-		MPMX19_02271	0.48	-1.5
2,392,073	-		MPMX19_02271	0.48	-0.9
2,392,073	-		MPMX19_02271	0.48	-0.9
2,392,073	-		MPMX19_02271	0.48	+0.6
2,392,073	-		MPMX19_02271	0.48	-1.9
2,392,189	+		MPMX19_02271	0.64	+2.2
2,392,189	+		MPMX19_02271	0.64	-0.5
2,392,189	+		MPMX19_02271	0.64	-2.2
2,392,189	+		MPMX19_02271	0.64	-1.7
2,392,189	+		MPMX19_02271	0.64	-0.6
2,392,189	+		MPMX19_02271	0.64	-0.0
2,392,189	+		MPMX19_02271	0.64	-0.4
2,392,190	-		MPMX19_02271	0.65	-0.4
2,392,190	-		MPMX19_02271	0.65	-0.9
2,392,190	-		MPMX19_02271	0.65	+1.0
2,392,190	-		MPMX19_02271	0.65	-0.3
2,392,190	-		MPMX19_02271	0.65	+0.1
2,392,190	-		MPMX19_02271	0.65	-1.0
2,392,190	-		MPMX19_02271	0.65	-2.0
2,392,190	-		MPMX19_02271	0.65	-1.4
2,392,190	-		MPMX19_02271	0.65	-0.8
2,392,190	-		MPMX19_02271	0.65	+1.2
2,392,319	+		MPMX19_02271	0.83	-0.4
2,392,319	+		MPMX19_02271	0.83	-1.2
2,392,319	+		MPMX19_02271	0.83	+0.6
2,392,320	-		MPMX19_02271	0.84	-0.1
2,392,320	-		MPMX19_02271	0.84	-0.8
2,392,320	-		MPMX19_02271	0.84	+0.2
2,392,423	+				-1.6
2,392,423	+				-0.9
2,392,423	+				-0.1
2,392,423	+				-0.2
2,392,423	+				-1.7
2,392,423	+				+1.2
2,392,424	-				+0.0
2,392,424	-				+0.2
2,392,424	-				-0.9
2,392,424	-				-0.4
2,392,424	-				-0.2
2,392,424	-				-0.9
2,392,424	-				-0.5
2,392,522	+				+0.4
2,392,522	+				-1.4
2,392,522	+				-0.8
2,392,522	+				+1.5
2,392,523	-				+0.2
2,392,523	-				-1.3
2,392,523	-				-0.8
2,392,523	-				-0.1
2,392,676	+		MPMX19_02272	0.39	+1.0
2,392,676	+		MPMX19_02272	0.39	+1.0
2,392,676	+		MPMX19_02272	0.39	+0.5
2,392,677	-		MPMX19_02272	0.39	+1.2
2,392,677	-		MPMX19_02272	0.39	-0.5
2,392,677	-		MPMX19_02272	0.39	-0.6
2,392,677	-		MPMX19_02272	0.39	-1.1
2,392,706	+		MPMX19_02272	0.48	+0.6
2,392,706	+		MPMX19_02272	0.48	+0.8
2,392,706	+		MPMX19_02272	0.48	-0.4
2,392,706	+		MPMX19_02272	0.48	+0.0
2,392,706	+		MPMX19_02272	0.48	+1.6
2,392,706	+		MPMX19_02272	0.48	-0.9
2,392,706	+		MPMX19_02272	0.48	-0.1
2,392,706	+		MPMX19_02272	0.48	-0.8
2,392,707	-		MPMX19_02272	0.48	-1.1
2,392,707	-		MPMX19_02272	0.48	+0.0
2,392,707	-		MPMX19_02272	0.48	+0.1
2,392,707	-		MPMX19_02272	0.48	-0.6
2,392,707	-		MPMX19_02272	0.48	-1.4
2,392,707	-		MPMX19_02272	0.48	-1.4
2,392,707	-		MPMX19_02272	0.48	+1.0
2,392,707	-		MPMX19_02272	0.48	-0.9
2,392,707	-		MPMX19_02272	0.48	-0.9
2,392,707	-		MPMX19_02272	0.48	-1.7
2,392,707	-		MPMX19_02272	0.48	-2.8
2,392,707	-		MPMX19_02272	0.48	-1.6
2,392,745	+		MPMX19_02272	0.59	-0.8
2,392,745	+		MPMX19_02272	0.59	+0.4
2,392,745	+		MPMX19_02272	0.59	-0.6
2,392,745	+		MPMX19_02272	0.59	-0.9
2,392,746	-		MPMX19_02272	0.59	+1.1
2,392,746	-		MPMX19_02272	0.59	+0.8
2,392,746	-		MPMX19_02272	0.59	-0.9
2,392,883	+				-2.7
2,392,883	+				-0.2
2,392,883	+				-0.9
2,392,883	+				-1.5
2,392,883	+				+0.2
2,392,884	-				-0.2
2,392,884	-				-1.2
2,392,884	-				+0.4
2,392,884	-				+0.1
2,392,884	-				-1.1
2,393,018	+				-1.3
2,393,018	+				-0.6
2,393,018	+				-0.4
2,393,018	+				-1.3
2,393,018	+				-1.0
2,393,018	+				+0.1
2,393,018	+				-1.8
2,393,018	+				-0.8
2,393,018	+				-1.1
2,393,018	+				+2.0
2,393,018	+				-0.7
2,393,018	+				-0.2
2,393,018	+				-0.7
2,393,018	+				-2.3
2,393,018	+				-1.2
2,393,018	+				+0.4
2,393,019	-				+1.2
2,393,019	-				-0.6
2,393,019	-				-0.8
2,393,019	-				+0.1
2,393,019	-				-1.2
2,393,019	-				-0.0
2,393,019	-				-0.3
2,393,019	-				-0.8
2,393,105	+				-1.2
2,393,105	+				-0.9
2,393,105	+				-1.4
2,393,105	+				-0.7
2,393,105	+				-0.7
2,393,105	+				-1.8
2,393,106	-				-2.2
2,393,106	-				-1.1
2,393,106	-				+0.1
2,393,118	+				-0.2
2,393,118	+				-1.2
2,393,118	+				-1.1
2,393,118	+				-0.4
2,393,119	-				-0.1
2,393,119	-				-0.4
2,393,119	-				-1.2
2,393,119	-				-1.6
2,393,119	-				-0.0
2,393,119	-				+0.2
2,393,119	-				+0.4
2,393,119	-				+0.0
2,393,119	-				+1.1
2,393,119	-				-0.4
2,393,119	-				-0.2
2,393,119	-				-0.4
2,393,202	+				-0.7
2,393,202	+				-0.8
2,393,202	+				-0.4
2,393,202	+				-0.1
2,393,202	+				-0.1
2,393,203	-				-1.0
2,393,203	-				-0.6
2,393,203	-				-0.5
2,393,306	+				+0.1
2,393,306	+				-0.8
2,393,306	+				-0.8
2,393,306	+				+0.5
2,393,306	+				-1.1
2,393,306	+				+0.2
2,393,306	+				-0.8
2,393,306	+				-1.2
2,393,306	+				-0.1
2,393,306	+				-0.6
2,393,306	+				-0.4
2,393,307	-				-0.1
2,393,307	-				-0.6
2,393,307	-				+0.1
2,393,307	-				-1.5
2,393,307	-				-1.7
2,393,307	-				-0.4
2,393,435	+				+0.2
2,393,435	+				-1.2
2,393,435	+				-2.2
2,393,435	+				+1.3
2,393,435	+				+0.1
2,393,435	+				-0.1
2,393,436	-				+0.1
2,393,436	-				-0.6
2,393,436	-				-0.4
2,393,436	-				+0.6
2,393,436	-				+0.1
2,393,436	-				-0.6
2,393,436	-				-0.1
2,393,436	-				-0.4
2,393,479	+				+0.8
2,393,479	+				-0.1
2,393,479	+				+0.9
2,393,479	+				-1.2
2,393,479	+				-1.4
2,393,479	+				-2.3
2,393,479	+				-0.2
2,393,479	+				-1.2
2,393,479	+				-0.1
2,393,480	-				-0.2
2,393,480	-				+0.5
2,393,480	-				-0.6
2,393,480	-				+0.6
2,393,480	-				-1.6
2,393,480	-				-0.4
2,393,480	-				-0.4
2,393,480	-				-0.5
2,393,543	+				-1.8
2,393,543	+				-0.6
2,393,543	+				-1.5
2,393,543	+				-1.2
2,393,543	+				-2.1
2,393,543	+				+0.4
2,393,543	+				+1.2
2,393,544	-				+0.8
2,393,544	-				-1.7
2,393,544	-				-1.6
2,393,544	-				-0.2
2,393,544	-				+0.2
2,393,544	-				-0.1
2,393,544	-				-0.9
2,393,544	-				+0.5
2,393,544	-				-0.9
2,393,560	+				+0.9
2,393,560	+				-0.9
2,393,560	+				-0.5
2,393,560	+				-0.1
2,393,560	+				-1.7
2,393,560	+				-0.1
2,393,560	+				+0.4
2,393,560	+				-1.0
2,393,560	+				-0.6
2,393,560	+				-0.5
2,393,560	+				-0.4
2,393,560	+				-1.2
2,393,560	+				-0.1
2,393,560	+				-0.9
2,393,560	+				-1.2
2,393,561	-				-1.1
2,393,561	-				-0.4
2,393,561	-				-0.8
2,393,561	-				-1.3
2,393,561	-				-2.0
2,393,561	-				-0.1
2,393,568	+				-0.2
2,393,568	+				+0.2
2,393,569	-				+0.6
2,393,662	+				+0.6
2,393,662	+				-0.1
2,393,662	+				-2.1
2,393,662	+				+0.0
2,393,662	+				-1.2
2,393,662	+				-0.1
2,393,662	+				+0.6
2,393,662	+				+1.0
2,393,662	+				-0.6
2,393,662	+				-0.6
2,393,662	+				-0.1
2,393,662	+				-1.5
2,393,662	+				-0.1
2,393,662	+				+0.5
2,393,662	+				-1.1
2,393,662	+				-0.6
2,393,662	+				+2.8
2,393,662	+				-0.4
2,393,662	+				+0.8
2,393,662	+				-0.1
2,393,663	-				+1.6
2,393,663	-				+1.6
2,393,663	-				-1.1
2,393,663	-				-0.9
2,393,663	-				-0.6
2,393,663	-				+1.1
2,393,663	-				+0.1
2,393,663	-				+0.1
2,393,663	-				-0.4
2,393,663	-				-0.5
2,393,663	-				+0.6
2,393,663	-				-0.6
2,393,663	-				-0.1
2,393,663	-				+1.2
2,393,663	-				-0.8
2,393,663	-				+0.2
2,393,663	-				-1.2
2,393,781	+				+0.4
2,393,781	+				+0.6
2,393,782	-				+0.3
2,393,782	-				-0.2