Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02258

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,375,585	+				+1.0
2,375,585	+				-0.2
2,375,585	+				-0.5
2,375,586	-				+0.2
2,375,586	-				+1.2
2,375,586	-				-1.6
2,375,586	-				+0.4
2,375,674	+				-2.4
2,375,674	+				+0.0
2,375,674	+				-0.4
2,375,674	+				-1.0
2,375,674	+				-0.2
2,375,674	+				-1.6
2,375,674	+				+1.0
2,375,674	+				+0.4
2,375,674	+				-1.0
2,375,674	+				-1.5
2,375,674	+				-1.0
2,375,674	+				-0.0
2,375,675	-				+0.2
2,375,675	-				+0.1
2,375,675	-				-0.2
2,375,675	-				-1.1
2,375,675	-				+1.0
2,375,675	-				+0.5
2,375,675	-				+1.3
2,375,675	-				-0.5
2,375,675	-				-1.2
2,375,675	-				+0.0
2,375,675	-				-0.4
2,375,675	-				-1.0
2,375,675	-				+0.6
2,375,675	-				-1.2
2,375,675	-				-0.7
2,375,675	-				-0.2
2,375,675	-				-1.8
2,376,061	+				+0.3
2,376,061	+				-1.1
2,376,062	-				+0.7
2,376,062	-				+0.6
2,376,062	-				-0.6
2,376,242	+		MPMX19_02257	0.57	-0.4
2,376,242	+		MPMX19_02257	0.57	-2.6
2,376,242	+		MPMX19_02257	0.57	-0.6
2,376,242	+		MPMX19_02257	0.57	+0.1
2,376,242	+		MPMX19_02257	0.57	-0.0
2,376,242	+		MPMX19_02257	0.57	+0.0
2,376,242	+		MPMX19_02257	0.57	+0.0
2,376,242	+		MPMX19_02257	0.57	-0.5
2,376,242	+		MPMX19_02257	0.57	-0.7
2,376,242	+		MPMX19_02257	0.57	+1.0
2,376,242	+		MPMX19_02257	0.57	+0.6
2,376,242	+		MPMX19_02257	0.57	-1.4
2,376,242	+		MPMX19_02257	0.57	+0.1
2,376,242	+		MPMX19_02257	0.57	-0.9
2,376,242	+		MPMX19_02257	0.57	-0.2
2,376,242	+		MPMX19_02257	0.57	-0.9
2,376,242	+		MPMX19_02257	0.57	-0.8
2,376,242	+		MPMX19_02257	0.57	-0.0
2,376,242	+		MPMX19_02257	0.57	-0.1
2,376,242	+		MPMX19_02257	0.57	-1.1
2,376,242	+		MPMX19_02257	0.57	+0.2
2,376,242	+		MPMX19_02257	0.57	-1.2
2,376,242	+		MPMX19_02257	0.57	-0.4
2,376,242	+		MPMX19_02257	0.57	-0.9
2,376,242	+		MPMX19_02257	0.57	-0.8
2,376,242	+		MPMX19_02257	0.57	-1.7
2,376,242	+		MPMX19_02257	0.57	-1.2
2,376,242	+		MPMX19_02257	0.57	+0.8
2,376,242	+		MPMX19_02257	0.57	+0.6
2,376,242	+		MPMX19_02257	0.57	-1.1
2,376,242	+		MPMX19_02257	0.57	-0.9
2,376,243	-		MPMX19_02257	0.58	+2.2
2,376,243	-		MPMX19_02257	0.58	-1.2
2,376,243	-		MPMX19_02257	0.58	-1.6
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	-0.6
2,376,243	-		MPMX19_02257	0.58	+1.8
2,376,243	-		MPMX19_02257	0.58	+0.6
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	-0.6
2,376,243	-		MPMX19_02257	0.58	-2.0
2,376,243	-		MPMX19_02257	0.58	-0.2
2,376,243	-		MPMX19_02257	0.58	-0.7
2,376,243	-		MPMX19_02257	0.58	+0.2
2,376,243	-		MPMX19_02257	0.58	-1.4
2,376,243	-		MPMX19_02257	0.58	+0.5
2,376,243	-		MPMX19_02257	0.58	-1.0
2,376,243	-		MPMX19_02257	0.58	-0.7
2,376,243	-		MPMX19_02257	0.58	-1.7
2,376,243	-		MPMX19_02257	0.58	+0.7
2,376,243	-		MPMX19_02257	0.58	+0.8
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	+0.7
2,376,243	-		MPMX19_02257	0.58	-1.4
2,376,243	-		MPMX19_02257	0.58	-0.1
2,376,243	-		MPMX19_02257	0.58	-0.7
2,376,243	-		MPMX19_02257	0.58	-0.6
2,376,243	-		MPMX19_02257	0.58	-0.5
2,376,243	-		MPMX19_02257	0.58	+0.6
2,376,243	-		MPMX19_02257	0.58	-0.7
2,376,243	-		MPMX19_02257	0.58	-1.8
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	+0.2
2,376,243	-		MPMX19_02257	0.58	+0.4
2,376,243	-		MPMX19_02257	0.58	-1.6
2,376,243	-		MPMX19_02257	0.58	-1.5
2,376,243	-		MPMX19_02257	0.58	-0.4
2,376,243	-		MPMX19_02257	0.58	+0.8
2,376,360	+				-0.6
2,376,361	-				-1.6
2,376,388	+				+0.2
2,376,389	-				-0.5
2,376,389	-				+0.6
2,376,434	+				-1.0
2,376,435	-				-2.1
2,376,437	+				-1.5
2,376,437	+				-1.2
2,376,438	-				+2.0
2,376,455	-				+1.2
2,376,463	+				-1.4
2,376,463	+				-0.9
2,376,463	+				-1.7
2,376,464	-				-0.6
2,376,464	-				-1.4
2,376,464	-				-0.8
2,376,471	+				+0.6
2,376,487	+				+0.2
2,376,488	-				+0.2
2,376,488	-				-0.3
2,376,507	+				-0.8
2,376,507	+				-0.9
2,376,519	+				-2.1
2,376,519	+				-0.1
2,376,519	+				-0.1
2,376,519	+				-0.6
2,376,520	-				-1.0
2,376,546	+				-0.2
2,376,546	+				-1.3
2,376,546	+				-1.3
2,376,546	+				-0.7
2,376,547	-				-0.9
2,376,547	-				-0.4
2,376,547	-				-0.2
2,376,547	-				-0.1
2,376,547	-				-0.6
2,376,572	+				-0.4
2,376,572	+				-1.6
2,376,579	+				-1.1
2,376,579	+				-1.2
2,376,580	-				+0.4
2,376,580	-				-1.1
2,376,580	-				+1.4
2,376,580	-				-1.9
2,376,588	+				+0.3
2,376,588	+				-1.1
2,376,588	+				-0.6
2,376,589	-				+0.1
2,376,589	-				+0.9
2,376,593	+				-0.6
2,376,593	+				+0.1
2,376,594	-				+0.1
2,376,594	-				-1.2
2,376,683	-		MPMX19_02258	0.30	-1.1
2,376,699	+		MPMX19_02258	0.35	-2.3
2,376,699	+		MPMX19_02258	0.35	-0.8
2,376,699	+		MPMX19_02258	0.35	-1.4
2,376,699	+		MPMX19_02258	0.35	+0.7
2,376,700	-		MPMX19_02258	0.35	-1.6
2,376,700	-		MPMX19_02258	0.35	+0.9
2,376,700	-		MPMX19_02258	0.35	+0.1
2,376,709	+		MPMX19_02258	0.38	-1.7
2,376,709	+		MPMX19_02258	0.38	-0.2
2,376,728	-		MPMX19_02258	0.43	-0.4
2,376,728	-		MPMX19_02258	0.43	-0.5
2,376,777	-		MPMX19_02258	0.56	-2.9
2,376,844	-		MPMX19_02258	0.75	-0.4
2,376,844	-		MPMX19_02258	0.75	-0.7
2,376,844	-		MPMX19_02258	0.75	-0.1
2,376,844	-		MPMX19_02258	0.75	+0.6
2,376,873	+		MPMX19_02258	0.83	-0.6
2,376,874	-		MPMX19_02258	0.83	-2.5
2,376,874	-		MPMX19_02258	0.83	+1.2
2,376,885	+		MPMX19_02258	0.86	+0.9
2,376,885	+		MPMX19_02258	0.86	-0.8
2,376,885	+		MPMX19_02258	0.86	-0.5
2,376,885	+		MPMX19_02258	0.86	-1.4
2,376,885	+		MPMX19_02258	0.86	+1.0
2,376,885	+		MPMX19_02258	0.86	+2.0
2,376,885	+		MPMX19_02258	0.86	-0.2
2,376,885	+		MPMX19_02258	0.86	-0.4
2,376,885	+		MPMX19_02258	0.86	+0.3
2,376,885	+		MPMX19_02258	0.86	+0.2
2,376,885	+		MPMX19_02258	0.86	-0.4
2,376,885	+		MPMX19_02258	0.86	+0.4
2,376,885	+		MPMX19_02258	0.86	+0.2
2,376,885	+		MPMX19_02258	0.86	+0.6
2,376,885	+		MPMX19_02258	0.86	-0.9
2,376,885	+		MPMX19_02258	0.86	-0.4
2,376,885	+		MPMX19_02258	0.86	-0.1
2,376,885	+		MPMX19_02258	0.86	-1.1
2,376,886	-		MPMX19_02258	0.87	-0.2
2,376,886	-		MPMX19_02258	0.87	-0.8
2,376,886	-		MPMX19_02258	0.87	-1.8
2,376,886	-		MPMX19_02258	0.87	+0.1
2,376,886	-		MPMX19_02258	0.87	-0.9
2,376,886	-		MPMX19_02258	0.87	-0.6
2,376,886	-		MPMX19_02258	0.87	+0.1
2,376,886	-		MPMX19_02258	0.87	+0.6
2,376,886	-		MPMX19_02258	0.87	-0.0
2,376,886	-		MPMX19_02258	0.87	+0.4
2,376,886	-		MPMX19_02258	0.87	-0.4
2,376,965	+				-0.3
2,376,965	+				-1.6
2,376,965	+				-1.5
2,376,965	+				+0.3
2,376,965	+				-0.8
2,376,965	+				-1.0
2,376,966	-				-0.6
2,376,966	-				-0.3
2,376,966	-				-1.9
2,376,966	-				+0.2
2,376,966	-				-0.7
2,376,966	-				-0.5
2,376,966	-				-2.2
2,376,966	-				+0.5
2,376,966	-				+0.4
2,376,966	-				-1.1
2,376,966	-				-1.5
2,376,969	+				-1.2
2,376,969	+				+0.6
2,376,969	+				+1.1
2,376,969	+				+0.9
2,376,969	+				+0.3
2,376,969	+				-2.5
2,376,969	+				-1.8
2,376,969	+				-0.9
2,376,969	+				+0.1
2,376,969	+				+1.0
2,376,969	+				-1.0
2,376,969	+				-0.6
2,376,969	+				-0.3
2,376,969	+				-0.2
2,376,969	+				+0.4
2,376,969	+				-1.9
2,376,969	+				-0.7
2,376,969	+				-0.9
2,376,969	+				-0.6
2,376,969	+				-1.1
2,376,969	+				-0.4
2,376,969	+				-1.1
2,376,969	+				-0.6
2,376,969	+				-0.2
2,376,969	+				-1.5
2,376,970	-				+0.9
2,376,970	-				+1.1
2,376,970	-				+0.2
2,376,970	-				+0.2
2,376,970	-				-0.6
2,376,970	-				+1.0
2,376,970	-				-1.2
2,376,970	-				-0.6
2,376,970	-				+0.8
2,376,970	-				+0.6
2,376,970	-				-1.4
2,376,970	-				+1.1
2,376,970	-				+0.4
2,376,970	-				-0.1
2,376,970	-				-2.2
2,376,970	-				+0.1
2,376,970	-				-1.1
2,376,970	-				-1.2
2,376,970	-				-0.8
2,376,970	-				+0.5
2,376,970	-				+0.0
2,376,970	-				-0.8
2,376,970	-				-0.5
2,376,970	-				-0.1
2,376,970	-				-0.4
2,376,970	-				+0.2
2,376,970	-				-0.3
2,376,970	-				+0.6
2,376,970	-				-0.9
2,376,970	-				-0.4
2,376,970	-				-2.1
2,376,970	-				+2.2
2,376,970	-				+1.1
2,376,970	-				+1.2
2,376,970	-				-1.1
2,376,970	-				-0.8
2,376,970	-				-0.0
2,376,970	-				-0.8
2,376,970	-				+0.4
2,376,970	-				-0.8
2,376,970	-				-0.6
2,376,970	-				-0.1
2,376,970	-				-1.1
2,376,970	-				-0.8
2,376,970	-				-1.2
2,376,973	+				-0.9
2,376,973	+				-1.2
2,376,973	+				+0.3
2,376,973	+				-1.6
2,376,973	+				+0.1
2,376,973	+				-1.0
2,376,973	+				-0.9
2,376,973	+				-1.1
2,376,973	+				+0.9
2,376,973	+				-0.3
2,376,973	+				-0.9
2,376,973	+				+0.2
2,376,973	+				-1.1
2,376,973	+				-0.2
2,376,973	+				-1.0
2,376,973	+				-0.8
2,376,973	+				-2.0
2,376,973	+				-0.5
2,376,973	+				-0.3
2,376,974	-				-0.4
2,376,974	-				+0.6
2,376,974	-				+2.2
2,376,974	-				-0.3
2,376,974	-				-0.3
2,376,974	-				-1.1
2,376,974	-				-0.8
2,376,974	-				-0.4
2,376,974	-				-1.2
2,376,974	-				-0.8
2,376,974	-				-0.5
2,376,974	-				-1.1
2,376,974	-				+0.6
2,376,974	-				-0.0
2,376,974	-				+1.8
2,376,974	-				+1.0
2,376,974	-				-0.8
2,376,974	-				-0.1
2,376,993	+				-0.3
2,376,994	-				+1.1
2,377,009	+				-0.6
2,377,010	-				+0.4
2,377,014	+				-0.6
2,377,014	+				+1.0
2,377,014	+				-0.8
2,377,014	+				-0.7
2,377,015	-				-0.2
2,377,015	-				+0.2
2,377,015	-				+0.2
2,377,015	-				-0.2
2,377,015	-				-1.6
2,377,015	-				-0.5
2,377,015	-				-0.1
2,377,015	-				-0.2
2,377,015	-				+0.2
2,377,015	-				+1.6
2,377,075	+				-0.3
2,377,075	+				+1.8
2,377,075	+				-2.0
2,377,075	+				+1.2
2,377,075	+				+0.6
2,377,079	+				-1.1
2,377,079	+				+0.5
2,377,079	+				-1.4
2,377,079	+				-1.6
2,377,079	+				-1.8
2,377,079	+				-0.6
2,377,079	+				-0.7
2,377,079	+				-1.8
2,377,079	+				-0.5
2,377,079	+				+0.5
2,377,079	+				+0.0
2,377,079	+				+1.2
2,377,079	+				-1.3
2,377,079	+				+0.4
2,377,079	+				-0.4
2,377,079	+				-0.7
2,377,079	+				-0.4
2,377,079	+				+0.2
2,377,079	+				-0.6
2,377,080	-				-2.8
2,377,080	-				-1.0
2,377,083	+				-0.2
2,377,083	+				-0.1
2,377,083	+				-0.5
2,377,083	+				+0.1
2,377,083	+				-0.8
2,377,083	+				-1.9
2,377,083	+				+0.1
2,377,083	+				-0.8
2,377,083	+				-1.4
2,377,083	+				-0.4
2,377,083	+				+2.0
2,377,083	+				-0.6
2,377,083	+				-1.0
2,377,083	+				-0.4
2,377,083	+				-0.2
2,377,083	+				+0.6
2,377,083	+				-1.4
2,377,083	+				+0.5
2,377,083	+				-0.8
2,377,083	+				+0.1
2,377,083	+				-1.5
2,377,083	+				-0.4
2,377,083	+				-2.1
2,377,084	-				-3.8
2,377,084	-				-0.5
2,377,084	-				-0.9
2,377,084	-				-1.4
2,377,084	-				-1.1
2,377,084	-				-0.6
2,377,084	-				-2.7
2,377,157	+				-0.9
2,377,157	+				-0.2
2,377,157	+				+0.2
2,377,163	+				-0.9
2,377,199	+				-1.4
2,377,253	+				-1.5
2,377,254	-				-1.4
2,377,259	+				-0.9
2,377,259	+				+0.0
2,377,260	-				-0.1
2,377,273	-				-0.1
2,377,273	-				+0.1
2,377,273	-				-0.1
2,377,295	+				-1.0
2,377,295	+				+1.2
2,377,298	+				+0.9
2,377,298	+				-0.1
2,377,298	+				+0.1
2,377,298	+				-0.2
2,377,298	+				-1.2
2,377,299	-				-1.3
2,377,299	-				-0.6
2,377,299	-				+0.6
2,377,299	-				+0.6
2,377,335	-				-1.5
2,377,439	+		MPMX19_02259	0.15	-0.4
2,377,451	+		MPMX19_02259	0.16	-0.7
2,377,452	-		MPMX19_02259	0.16	+0.1
2,377,461	+		MPMX19_02259	0.17	-1.0
2,377,462	-		MPMX19_02259	0.17	-0.6
2,377,484	+		MPMX19_02259	0.20	+2.2
2,377,495	+		MPMX19_02259	0.21	-0.2
2,377,495	+		MPMX19_02259	0.21	-1.2
2,377,496	-		MPMX19_02259	0.21	-1.5
2,377,496	-		MPMX19_02259	0.21	-0.7
2,377,499	+		MPMX19_02259	0.21	-0.2
2,377,499	+		MPMX19_02259	0.21	-1.4
2,377,500	-		MPMX19_02259	0.21	-1.5
2,377,500	-		MPMX19_02259	0.21	-0.6
2,377,585	+		MPMX19_02259	0.31	+0.5
2,377,585	+		MPMX19_02259	0.31	-0.7
2,377,585	+		MPMX19_02259	0.31	+0.3
2,377,585	+		MPMX19_02259	0.31	-0.5
2,377,586	-		MPMX19_02259	0.31	-0.7
2,377,586	-		MPMX19_02259	0.31	+0.4
2,377,615	+		MPMX19_02259	0.34	-0.4
2,377,615	+		MPMX19_02259	0.34	+1.0
2,377,615	+		MPMX19_02259	0.34	+0.0
2,377,615	+		MPMX19_02259	0.34	-0.7
2,377,615	+		MPMX19_02259	0.34	-0.6
2,377,615	+		MPMX19_02259	0.34	-0.5
2,377,615	+		MPMX19_02259	0.34	-1.4
2,377,615	+		MPMX19_02259	0.34	-0.5
2,377,615	+		MPMX19_02259	0.34	+0.3
2,377,615	+		MPMX19_02259	0.34	-0.1
2,377,616	-		MPMX19_02259	0.34	-1.7
2,377,616	-		MPMX19_02259	0.34	+0.2
2,377,616	-		MPMX19_02259	0.34	-0.9
2,377,616	-		MPMX19_02259	0.34	-1.2
2,377,616	-		MPMX19_02259	0.34	+1.8
2,377,616	-		MPMX19_02259	0.34	-0.9
2,377,616	-		MPMX19_02259	0.34	+0.2
2,377,673	-		MPMX19_02259	0.40	-0.7
2,377,673	-		MPMX19_02259	0.40	-1.8
2,377,673	-		MPMX19_02259	0.40	-0.7
2,377,673	-		MPMX19_02259	0.40	-0.8
2,377,680	-		MPMX19_02259	0.41	+0.2
2,377,680	-		MPMX19_02259	0.41	-1.2
2,377,680	-		MPMX19_02259	0.41	-0.4
2,377,680	-		MPMX19_02259	0.41	-0.1
2,377,681	+		MPMX19_02259	0.41	-1.6
2,377,681	+		MPMX19_02259	0.41	-0.6
2,377,681	+		MPMX19_02259	0.41	-0.6
2,377,682	-		MPMX19_02259	0.41	+0.4
2,377,702	+		MPMX19_02259	0.43	-0.8
2,377,703	-		MPMX19_02259	0.43	-2.1
2,377,726	+		MPMX19_02259	0.46	+1.6
2,377,780	-		MPMX19_02259	0.51	-0.4
2,377,780	-		MPMX19_02259	0.51	-1.0
2,377,781	+		MPMX19_02259	0.51	-0.2
2,377,781	+		MPMX19_02259	0.51	+1.0
2,377,782	-		MPMX19_02259	0.52	-0.8
2,377,821	-		MPMX19_02259	0.56	-1.2
2,377,821	-		MPMX19_02259	0.56	+0.4
2,377,832	-		MPMX19_02259	0.57	-0.9
2,377,846	+		MPMX19_02259	0.58	-1.4
2,377,846	+		MPMX19_02259	0.58	+0.3
2,377,846	+		MPMX19_02259	0.58	+0.2
2,377,846	+		MPMX19_02259	0.58	-0.4
2,377,847	-		MPMX19_02259	0.59	+0.2
2,377,847	-		MPMX19_02259	0.59	-0.1
2,377,849	+		MPMX19_02259	0.59	-0.8
2,377,849	+		MPMX19_02259	0.59	-0.1
2,377,850	-		MPMX19_02259	0.59	-0.8
2,377,904	+		MPMX19_02259	0.65	-0.2