Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02209

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,310,119	+		MPMX19_02207	0.85	-1.6
2,310,119	+		MPMX19_02207	0.85	-1.6
2,310,137	+		MPMX19_02207	0.88	-0.3
2,310,138	-		MPMX19_02207	0.88	-1.6
2,310,138	-		MPMX19_02207	0.88	+0.5
2,310,138	-		MPMX19_02207	0.88	-0.3
2,310,138	-		MPMX19_02207	0.88	-0.5
2,310,138	-		MPMX19_02207	0.88	-0.3
2,310,138	-		MPMX19_02207	0.88	-0.7
2,310,898	+				+0.2
2,310,899	-				-0.8
2,310,899	-				+0.2
2,310,899	-				-0.3
2,310,899	-				-1.5
2,310,899	-				-1.0
2,310,899	-				-0.1
2,310,899	-				-1.0
2,310,899	-				-1.1
2,310,968	+				+0.9
2,310,968	+				-0.6
2,310,968	-				+1.2
2,310,969	-				-0.2
2,310,969	-				+0.2
2,310,969	-				-0.5
2,310,969	-				-2.3
2,310,969	-				-0.5
2,310,969	-				-0.9
2,310,969	-				-0.8
2,310,987	-				-1.0
2,310,987	-				-1.7
2,310,987	-				-0.8
2,310,987	-				-1.6
2,311,276	+		MPMX19_02209	0.47	-0.8
2,311,276	+		MPMX19_02209	0.47	-1.4
2,311,276	+		MPMX19_02209	0.47	-0.1
2,311,276	+		MPMX19_02209	0.47	-1.4
2,311,276	+		MPMX19_02209	0.47	-1.1
2,311,276	+		MPMX19_02209	0.47	-0.9
2,311,276	+		MPMX19_02209	0.47	-0.6
2,311,276	+		MPMX19_02209	0.47	-0.5
2,311,276	+		MPMX19_02209	0.47	-0.8
2,311,276	+		MPMX19_02209	0.47	+1.1
2,311,276	+		MPMX19_02209	0.47	-1.4
2,311,277	-		MPMX19_02209	0.48	-0.6
2,311,277	-		MPMX19_02209	0.48	-0.6
2,311,277	-		MPMX19_02209	0.48	-0.8
2,311,277	-		MPMX19_02209	0.48	-1.8
2,311,277	-		MPMX19_02209	0.48	-1.1
2,311,277	-		MPMX19_02209	0.48	-0.6
2,311,277	-		MPMX19_02209	0.48	+0.1
2,311,277	-		MPMX19_02209	0.48	+0.0
2,311,474	+		MPMX19_02209	0.81	-0.1
2,311,474	+		MPMX19_02209	0.81	-1.4
2,311,474	+		MPMX19_02209	0.81	-0.1
2,311,474	+		MPMX19_02209	0.81	-0.5
2,311,474	+		MPMX19_02209	0.81	+0.4
2,311,474	+		MPMX19_02209	0.81	-2.0
2,311,474	+		MPMX19_02209	0.81	-1.3
2,311,474	+		MPMX19_02209	0.81	-0.0
2,311,474	+		MPMX19_02209	0.81	+0.3
2,311,474	+		MPMX19_02209	0.81	-0.5
2,311,474	+		MPMX19_02209	0.81	-0.3
2,311,474	+		MPMX19_02209	0.81	+0.1
2,311,474	+		MPMX19_02209	0.81	+1.0
2,311,474	+		MPMX19_02209	0.81	-0.8
2,311,474	+		MPMX19_02209	0.81	+0.2
2,311,474	+		MPMX19_02209	0.81	-2.3
2,311,474	+		MPMX19_02209	0.81	-0.1
2,311,474	+		MPMX19_02209	0.81	-2.9
2,311,474	+		MPMX19_02209	0.81	-0.1
2,311,474	+		MPMX19_02209	0.81	-0.3
2,311,474	+		MPMX19_02209	0.81	-0.6
2,311,474	+		MPMX19_02209	0.81	-1.7
2,311,474	+		MPMX19_02209	0.81	-1.3
2,311,474	+		MPMX19_02209	0.81	-1.7
2,311,474	+		MPMX19_02209	0.81	-1.5
2,311,474	+		MPMX19_02209	0.81	-0.0
2,311,475	-		MPMX19_02209	0.81	+0.2
2,311,475	-		MPMX19_02209	0.81	-0.2
2,311,475	-		MPMX19_02209	0.81	-0.3
2,311,475	-		MPMX19_02209	0.81	-0.2
2,311,475	-		MPMX19_02209	0.81	-1.6
2,311,475	-		MPMX19_02209	0.81	+0.3
2,311,475	-		MPMX19_02209	0.81	+0.1
2,311,475	-		MPMX19_02209	0.81	-0.4
2,311,475	-		MPMX19_02209	0.81	-1.3
2,311,475	-		MPMX19_02209	0.81	+0.2
2,311,475	-		MPMX19_02209	0.81	-0.4
2,311,475	-		MPMX19_02209	0.81	-0.8
2,311,475	-		MPMX19_02209	0.81	-1.3
2,311,475	-		MPMX19_02209	0.81	-0.4
2,311,475	-		MPMX19_02209	0.81	-1.2
2,311,475	-		MPMX19_02209	0.81	+0.1
2,311,475	-		MPMX19_02209	0.81	-1.4
2,311,711	+				-1.1
2,311,711	+				+0.2
2,311,711	+				+0.2
2,311,711	+				-0.1
2,311,711	+				-0.1
2,311,711	+				-0.2
2,311,711	+				-0.1
2,311,711	+				-1.7
2,311,711	+				-0.9
2,311,712	-				-0.4
2,311,712	-				-1.1
2,312,107	+		MPMX19_02210	0.26	-1.8
2,312,107	+		MPMX19_02210	0.26	-1.0
2,312,107	+		MPMX19_02210	0.26	-1.1
2,312,107	+		MPMX19_02210	0.26	-1.3
2,312,108	-		MPMX19_02210	0.26	-0.4
2,312,108	-		MPMX19_02210	0.26	-0.6
2,312,108	-		MPMX19_02210	0.26	-0.5
2,312,108	-		MPMX19_02210	0.26	-0.9
2,312,108	-		MPMX19_02210	0.26	-0.9
2,312,108	-		MPMX19_02210	0.26	+0.0
2,312,108	-		MPMX19_02210	0.26	+0.9
2,312,119	+		MPMX19_02210	0.27	+0.2
2,312,119	+		MPMX19_02210	0.27	+0.3
2,312,119	+		MPMX19_02210	0.27	-0.6
2,312,119	+		MPMX19_02210	0.27	-0.1
2,312,119	+		MPMX19_02210	0.27	+0.6
2,312,119	+		MPMX19_02210	0.27	-2.4
2,312,119	+		MPMX19_02210	0.27	-1.0
2,312,119	+		MPMX19_02210	0.27	-1.4
2,312,119	+		MPMX19_02210	0.27	+0.8
2,312,119	+		MPMX19_02210	0.27	+1.0
2,312,119	+		MPMX19_02210	0.27	-0.7
2,312,119	+		MPMX19_02210	0.27	+0.2
2,312,119	+		MPMX19_02210	0.27	-1.5
2,312,119	+		MPMX19_02210	0.27	-1.4
2,312,119	+		MPMX19_02210	0.27	-0.7
2,312,119	+		MPMX19_02210	0.27	+0.5
2,312,119	+		MPMX19_02210	0.27	+0.2
2,312,119	+		MPMX19_02210	0.27	-0.7
2,312,120	-		MPMX19_02210	0.27	+0.8
2,312,120	-		MPMX19_02210	0.27	-0.1
2,312,120	-		MPMX19_02210	0.27	-0.9
2,312,120	-		MPMX19_02210	0.27	-0.6
2,312,120	-		MPMX19_02210	0.27	+0.9
2,312,120	-		MPMX19_02210	0.27	-0.7
2,312,120	-		MPMX19_02210	0.27	-2.0
2,312,120	-		MPMX19_02210	0.27	-0.3
2,312,120	-		MPMX19_02210	0.27	+0.0
2,312,120	-		MPMX19_02210	0.27	+1.2
2,312,120	-		MPMX19_02210	0.27	-1.0
2,312,120	-		MPMX19_02210	0.27	-1.3
2,312,120	-		MPMX19_02210	0.27	-0.7
2,312,120	-		MPMX19_02210	0.27	-1.9
2,312,120	-		MPMX19_02210	0.27	-1.1
2,312,120	-		MPMX19_02210	0.27	+0.3
2,312,245	+		MPMX19_02210	0.33	-2.3
2,312,245	+		MPMX19_02210	0.33	-0.1
2,312,245	+		MPMX19_02210	0.33	+0.2
2,312,245	+		MPMX19_02210	0.33	+0.9
2,312,245	+		MPMX19_02210	0.33	+0.5
2,312,245	+		MPMX19_02210	0.33	-0.8
2,312,245	+		MPMX19_02210	0.33	-0.1
2,312,245	+		MPMX19_02210	0.33	-1.1
2,312,245	+		MPMX19_02210	0.33	-1.5
2,312,245	+		MPMX19_02210	0.33	-1.6
2,312,245	+		MPMX19_02210	0.33	-0.7
2,312,245	+		MPMX19_02210	0.33	+1.6
2,312,245	+		MPMX19_02210	0.33	+0.1
2,312,245	+		MPMX19_02210	0.33	+0.3
2,312,245	+		MPMX19_02210	0.33	-0.5
2,312,245	+		MPMX19_02210	0.33	+0.6
2,312,245	+		MPMX19_02210	0.33	-1.7
2,312,245	+		MPMX19_02210	0.33	-0.6
2,312,246	-		MPMX19_02210	0.33	+0.5
2,312,246	-		MPMX19_02210	0.33	+0.0
2,312,246	-		MPMX19_02210	0.33	+0.6
2,312,246	-		MPMX19_02210	0.33	+0.6
2,312,246	-		MPMX19_02210	0.33	-0.6
2,312,246	-		MPMX19_02210	0.33	+0.1
2,312,246	-		MPMX19_02210	0.33	+0.3
2,312,246	-		MPMX19_02210	0.33	-0.0
2,312,246	-		MPMX19_02210	0.33	-0.8
2,312,246	-		MPMX19_02210	0.33	-0.8
2,312,246	-		MPMX19_02210	0.33	-0.0
2,312,246	-		MPMX19_02210	0.33	+0.5
2,312,246	-		MPMX19_02210	0.33	-0.4
2,312,246	-		MPMX19_02210	0.33	+0.3
2,312,368	+		MPMX19_02210	0.40	+0.2
2,312,368	+		MPMX19_02210	0.40	+0.4
2,312,369	-		MPMX19_02210	0.40	-2.1
2,312,369	-		MPMX19_02210	0.40	-0.8
2,312,369	-		MPMX19_02210	0.40	-0.9
2,312,369	-		MPMX19_02210	0.40	-0.5
2,312,369	-		MPMX19_02210	0.40	-0.1
2,312,469	+		MPMX19_02210	0.45	+0.3
2,312,469	+		MPMX19_02210	0.45	-0.4
2,312,470	-		MPMX19_02210	0.45	+0.4
2,312,470	-		MPMX19_02210	0.45	-0.6
2,312,470	-		MPMX19_02210	0.45	-0.4
2,312,470	-		MPMX19_02210	0.45	-1.3
2,312,470	-		MPMX19_02210	0.45	-0.8
2,312,470	-		MPMX19_02210	0.45	+0.6
2,312,512	+		MPMX19_02210	0.48	+0.8
2,312,512	+		MPMX19_02210	0.48	-1.1
2,312,513	-		MPMX19_02210	0.48	+0.1
2,312,513	-		MPMX19_02210	0.48	-0.6
2,312,542	+		MPMX19_02210	0.49	-1.0
2,312,542	+		MPMX19_02210	0.49	+0.6
2,312,542	+		MPMX19_02210	0.49	-0.1
2,312,543	-		MPMX19_02210	0.49	+0.9
2,312,543	-		MPMX19_02210	0.49	+0.8
2,312,543	-		MPMX19_02210	0.49	-0.3
2,312,543	-		MPMX19_02210	0.49	-0.1
2,312,557	+		MPMX19_02210	0.50	-1.3
2,312,557	+		MPMX19_02210	0.50	-0.6
2,312,557	+		MPMX19_02210	0.50	-3.2
2,312,557	+		MPMX19_02210	0.50	+0.4
2,312,557	+		MPMX19_02210	0.50	-0.6
2,312,557	+		MPMX19_02210	0.50	+1.4
2,312,557	+		MPMX19_02210	0.50	+1.2
2,312,557	+		MPMX19_02210	0.50	-0.0
2,312,557	+		MPMX19_02210	0.50	-1.2
2,312,557	+		MPMX19_02210	0.50	-1.0
2,312,557	+		MPMX19_02210	0.50	-0.3
2,312,557	+		MPMX19_02210	0.50	-1.0
2,312,557	+		MPMX19_02210	0.50	-0.4
2,312,557	+		MPMX19_02210	0.50	-0.0
2,312,557	+		MPMX19_02210	0.50	-0.1
2,312,557	+		MPMX19_02210	0.50	+0.1
2,312,557	+		MPMX19_02210	0.50	+0.3
2,312,557	+		MPMX19_02210	0.50	+0.1
2,312,557	+		MPMX19_02210	0.50	+1.4
2,312,557	+		MPMX19_02210	0.50	-1.3
2,312,557	+		MPMX19_02210	0.50	-0.8
2,312,557	+		MPMX19_02210	0.50	-1.4
2,312,557	+		MPMX19_02210	0.50	-0.6
2,312,557	+		MPMX19_02210	0.50	+0.8
2,312,557	+		MPMX19_02210	0.50	-0.6
2,312,557	+		MPMX19_02210	0.50	+0.6
2,312,557	+		MPMX19_02210	0.50	+1.0
2,312,557	+		MPMX19_02210	0.50	+0.6
2,312,557	+		MPMX19_02210	0.50	+1.0
2,312,558	-		MPMX19_02210	0.50	-1.1
2,312,558	-		MPMX19_02210	0.50	+0.2
2,312,558	-		MPMX19_02210	0.50	+0.4
2,312,558	-		MPMX19_02210	0.50	-0.4
2,312,558	-		MPMX19_02210	0.50	-1.0
2,312,558	-		MPMX19_02210	0.50	-0.6
2,312,558	-		MPMX19_02210	0.50	+0.4
2,312,558	-		MPMX19_02210	0.50	-0.6
2,312,558	-		MPMX19_02210	0.50	-0.4
2,312,558	-		MPMX19_02210	0.50	+0.5
2,312,558	-		MPMX19_02210	0.50	+0.4
2,312,558	-		MPMX19_02210	0.50	-1.2
2,312,558	-		MPMX19_02210	0.50	-0.4
2,312,558	-		MPMX19_02210	0.50	-0.9
2,312,558	-		MPMX19_02210	0.50	-0.5
2,312,558	-		MPMX19_02210	0.50	-0.0
2,312,558	-		MPMX19_02210	0.50	-1.8
2,312,558	-		MPMX19_02210	0.50	-0.9
2,312,558	-		MPMX19_02210	0.50	-1.3
2,312,558	-		MPMX19_02210	0.50	-0.1
2,312,558	-		MPMX19_02210	0.50	+1.3
2,312,558	-		MPMX19_02210	0.50	-0.3
2,312,558	-		MPMX19_02210	0.50	+0.0
2,312,558	-		MPMX19_02210	0.50	+0.0
2,312,558	-		MPMX19_02210	0.50	-1.7
2,312,558	-		MPMX19_02210	0.50	-1.5
2,312,558	-		MPMX19_02210	0.50	+0.9
2,312,558	-		MPMX19_02210	0.50	-1.8
2,312,558	-		MPMX19_02210	0.50	+1.0
2,312,558	-		MPMX19_02210	0.50	-1.4
2,312,558	-		MPMX19_02210	0.50	-0.5
2,312,558	-		MPMX19_02210	0.50	-2.0
2,312,558	-		MPMX19_02210	0.50	-2.3
2,312,558	-		MPMX19_02210	0.50	-0.1
2,312,558	-		MPMX19_02210	0.50	-1.0
2,312,558	-		MPMX19_02210	0.50	+0.1
2,312,558	-		MPMX19_02210	0.50	-2.2
2,312,558	-		MPMX19_02210	0.50	-1.3
2,312,558	-		MPMX19_02210	0.50	+1.3
2,312,558	-		MPMX19_02210	0.50	-1.3
2,312,558	-		MPMX19_02210	0.50	-0.7