Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02201

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,302,259	+				-0.4
2,302,336	+				+0.1
2,302,336	+				-0.7
2,302,336	+				+0.7
2,302,336	+				-0.6
2,302,336	+				-1.2
2,302,337	-		MPMX19_02200	0.10	+0.0
2,302,381	+		MPMX19_02200	0.15	-2.2
2,302,381	+		MPMX19_02200	0.15	-1.3
2,302,381	+		MPMX19_02200	0.15	+0.5
2,302,381	+		MPMX19_02200	0.15	-0.5
2,302,381	+		MPMX19_02200	0.15	-1.1
2,302,381	+		MPMX19_02200	0.15	-0.9
2,302,381	+		MPMX19_02200	0.15	-1.3
2,302,381	+		MPMX19_02200	0.15	+1.0
2,302,381	+		MPMX19_02200	0.15	+0.6
2,302,381	+		MPMX19_02200	0.15	+0.2
2,302,381	+		MPMX19_02200	0.15	+0.1
2,302,381	+		MPMX19_02200	0.15	-1.0
2,302,381	+		MPMX19_02200	0.15	-0.3
2,302,381	+		MPMX19_02200	0.15	+0.7
2,302,381	+		MPMX19_02200	0.15	+0.9
2,302,381	+		MPMX19_02200	0.15	-0.6
2,302,381	+		MPMX19_02200	0.15	+1.2
2,302,381	+		MPMX19_02200	0.15	-0.6
2,302,382	-		MPMX19_02200	0.15	-0.9
2,302,382	-		MPMX19_02200	0.15	+0.2
2,302,382	-		MPMX19_02200	0.15	-2.2
2,302,382	-		MPMX19_02200	0.15	+0.7
2,302,382	-		MPMX19_02200	0.15	-0.4
2,302,382	-		MPMX19_02200	0.15	+0.6
2,302,382	-		MPMX19_02200	0.15	+0.1
2,302,382	-		MPMX19_02200	0.15	-1.9
2,302,382	-		MPMX19_02200	0.15	+1.2
2,302,382	-		MPMX19_02200	0.15	-1.5
2,302,382	-		MPMX19_02200	0.15	-0.6
2,302,382	-		MPMX19_02200	0.15	+0.0
2,302,382	-		MPMX19_02200	0.15	-0.0
2,302,382	-		MPMX19_02200	0.15	-0.5
2,302,382	-		MPMX19_02200	0.15	-1.4
2,302,438	+		MPMX19_02200	0.21	+0.9
2,302,438	+		MPMX19_02200	0.21	-2.0
2,302,438	+		MPMX19_02200	0.21	+0.7
2,302,438	+		MPMX19_02200	0.21	-0.4
2,302,438	+		MPMX19_02200	0.21	-1.5
2,302,438	+		MPMX19_02200	0.21	+0.3
2,302,438	+		MPMX19_02200	0.21	-1.3
2,302,438	+		MPMX19_02200	0.21	-1.1
2,302,438	+		MPMX19_02200	0.21	+0.1
2,302,438	+		MPMX19_02200	0.21	-0.8
2,302,438	+		MPMX19_02200	0.21	+0.0
2,302,438	+		MPMX19_02200	0.21	+1.5
2,302,438	+		MPMX19_02200	0.21	-0.8
2,302,438	+		MPMX19_02200	0.21	-1.4
2,302,438	+		MPMX19_02200	0.21	-0.1
2,302,438	+		MPMX19_02200	0.21	+1.0
2,302,438	+		MPMX19_02200	0.21	-1.1
2,302,439	-		MPMX19_02200	0.22	-1.4
2,302,439	-		MPMX19_02200	0.22	-0.9
2,302,439	-		MPMX19_02200	0.22	+0.6
2,302,439	-		MPMX19_02200	0.22	+0.6
2,302,439	-		MPMX19_02200	0.22	-0.5
2,302,439	-		MPMX19_02200	0.22	-0.7
2,302,439	-		MPMX19_02200	0.22	-0.0
2,302,439	-		MPMX19_02200	0.22	-1.3
2,302,439	-		MPMX19_02200	0.22	+0.4
2,302,439	-		MPMX19_02200	0.22	-0.1
2,302,439	-		MPMX19_02200	0.22	-0.7
2,302,439	-		MPMX19_02200	0.22	-1.3
2,302,587	-		MPMX19_02200	0.38	-0.1
2,302,594	+		MPMX19_02200	0.39	-0.7
2,302,594	+		MPMX19_02200	0.39	+0.2
2,302,594	+		MPMX19_02200	0.39	-2.0
2,302,594	+		MPMX19_02200	0.39	-1.1
2,302,594	+		MPMX19_02200	0.39	-0.1
2,302,594	+		MPMX19_02200	0.39	-1.0
2,302,594	+		MPMX19_02200	0.39	-1.3
2,302,594	+		MPMX19_02200	0.39	-0.1
2,302,594	+		MPMX19_02200	0.39	+1.8
2,302,594	+		MPMX19_02200	0.39	-0.4
2,302,594	+		MPMX19_02200	0.39	-1.0
2,302,595	-		MPMX19_02200	0.39	-0.5
2,302,595	-		MPMX19_02200	0.39	+1.0
2,302,595	-		MPMX19_02200	0.39	-0.8
2,302,595	-		MPMX19_02200	0.39	-1.4
2,302,595	-		MPMX19_02200	0.39	-0.3
2,302,595	-		MPMX19_02200	0.39	-1.4
2,302,595	-		MPMX19_02200	0.39	-0.6
2,302,595	-		MPMX19_02200	0.39	-0.4
2,302,595	-		MPMX19_02200	0.39	-1.7
2,302,621	+		MPMX19_02200	0.42	+0.0
2,302,621	+		MPMX19_02200	0.42	+0.4
2,302,621	+		MPMX19_02200	0.42	-1.4
2,302,621	+		MPMX19_02200	0.42	+0.0
2,302,621	+		MPMX19_02200	0.42	+0.6
2,302,621	+		MPMX19_02200	0.42	-1.0
2,302,621	+		MPMX19_02200	0.42	-0.1
2,302,621	+		MPMX19_02200	0.42	+0.1
2,302,621	+		MPMX19_02200	0.42	-1.4
2,302,621	+		MPMX19_02200	0.42	-1.1
2,302,621	+		MPMX19_02200	0.42	+0.5
2,302,621	+		MPMX19_02200	0.42	-1.0
2,302,621	+		MPMX19_02200	0.42	-0.1
2,302,621	+		MPMX19_02200	0.42	+1.0
2,302,621	+		MPMX19_02200	0.42	-1.1
2,302,621	+		MPMX19_02200	0.42	-0.4
2,302,621	+		MPMX19_02200	0.42	-1.0
2,302,621	+		MPMX19_02200	0.42	-1.3
2,302,621	+		MPMX19_02200	0.42	+0.2
2,302,621	+		MPMX19_02200	0.42	-0.8
2,302,621	+		MPMX19_02200	0.42	-2.4
2,302,621	+		MPMX19_02200	0.42	-0.5
2,302,621	+		MPMX19_02200	0.42	-1.4
2,302,621	+		MPMX19_02200	0.42	+0.1
2,302,622	-		MPMX19_02200	0.42	+0.5
2,302,622	-		MPMX19_02200	0.42	-1.8
2,302,622	-		MPMX19_02200	0.42	-0.4
2,302,622	-		MPMX19_02200	0.42	-0.5
2,302,622	-		MPMX19_02200	0.42	-1.1
2,302,622	-		MPMX19_02200	0.42	-1.3
2,302,622	-		MPMX19_02200	0.42	-0.6
2,302,622	-		MPMX19_02200	0.42	-0.4
2,302,622	-		MPMX19_02200	0.42	-0.3
2,302,622	-		MPMX19_02200	0.42	+0.0
2,302,622	-		MPMX19_02200	0.42	+0.5
2,302,622	-		MPMX19_02200	0.42	-1.1
2,302,622	-		MPMX19_02200	0.42	-0.1
2,302,622	-		MPMX19_02200	0.42	+0.0
2,302,622	-		MPMX19_02200	0.42	+0.7
2,302,622	-		MPMX19_02200	0.42	-0.4
2,302,622	-		MPMX19_02200	0.42	-0.7
2,302,622	-		MPMX19_02200	0.42	-1.3
2,302,622	-		MPMX19_02200	0.42	-1.1
2,302,622	-		MPMX19_02200	0.42	-0.2
2,302,622	-		MPMX19_02200	0.42	-1.0
2,302,622	-		MPMX19_02200	0.42	-0.3
2,302,627	+		MPMX19_02200	0.43	+0.4
2,302,627	+		MPMX19_02200	0.43	+0.8
2,302,627	+		MPMX19_02200	0.43	-0.3
2,302,627	+		MPMX19_02200	0.43	-0.3
2,302,627	+		MPMX19_02200	0.43	-1.7
2,302,627	+		MPMX19_02200	0.43	-0.8
2,302,627	+		MPMX19_02200	0.43	-1.6
2,302,627	+		MPMX19_02200	0.43	+0.5
2,302,627	+		MPMX19_02200	0.43	-0.8
2,302,627	+		MPMX19_02200	0.43	-0.3
2,302,627	+		MPMX19_02200	0.43	-1.8
2,302,627	+		MPMX19_02200	0.43	+0.8
2,302,627	+		MPMX19_02200	0.43	-0.6
2,302,627	+		MPMX19_02200	0.43	-1.4
2,302,627	+		MPMX19_02200	0.43	-1.5
2,302,627	+		MPMX19_02200	0.43	-1.4
2,302,627	+		MPMX19_02200	0.43	-0.4
2,302,627	+		MPMX19_02200	0.43	-0.2
2,302,627	+		MPMX19_02200	0.43	-1.3
2,302,627	+		MPMX19_02200	0.43	-1.0
2,302,627	+		MPMX19_02200	0.43	-0.8
2,302,627	+		MPMX19_02200	0.43	+0.8
2,302,627	+		MPMX19_02200	0.43	+0.8
2,302,627	+		MPMX19_02200	0.43	+0.9
2,302,627	+		MPMX19_02200	0.43	-1.2
2,302,627	+		MPMX19_02200	0.43	-1.0
2,302,627	+		MPMX19_02200	0.43	+0.3
2,302,628	-		MPMX19_02200	0.43	-0.1
2,302,628	-		MPMX19_02200	0.43	+0.7
2,302,628	-		MPMX19_02200	0.43	-0.9
2,302,628	-		MPMX19_02200	0.43	+0.1
2,302,628	-		MPMX19_02200	0.43	-1.3
2,302,628	-		MPMX19_02200	0.43	-0.4
2,302,628	-		MPMX19_02200	0.43	-1.3
2,302,628	-		MPMX19_02200	0.43	-0.4
2,302,628	-		MPMX19_02200	0.43	-1.1
2,302,628	-		MPMX19_02200	0.43	-0.2
2,302,628	-		MPMX19_02200	0.43	-0.8
2,302,628	-		MPMX19_02200	0.43	-0.4
2,302,628	-		MPMX19_02200	0.43	-1.7
2,302,628	-		MPMX19_02200	0.43	-0.2
2,302,628	-		MPMX19_02200	0.43	+0.3
2,302,628	-		MPMX19_02200	0.43	-1.5
2,302,628	-		MPMX19_02200	0.43	-0.4
2,302,628	-		MPMX19_02200	0.43	-0.0
2,302,628	-		MPMX19_02200	0.43	-1.5
2,302,628	-		MPMX19_02200	0.43	+0.2
2,302,628	-		MPMX19_02200	0.43	-2.1
2,302,628	-		MPMX19_02200	0.43	-1.4
2,302,628	-		MPMX19_02200	0.43	-1.1
2,302,628	-		MPMX19_02200	0.43	+0.2
2,302,741	+		MPMX19_02200	0.56	-0.5
2,302,741	+		MPMX19_02200	0.56	+0.6
2,302,741	+		MPMX19_02200	0.56	-0.6
2,302,741	+		MPMX19_02200	0.56	-0.3
2,302,741	+		MPMX19_02200	0.56	+0.6
2,302,741	+		MPMX19_02200	0.56	-0.6
2,302,741	+		MPMX19_02200	0.56	-0.2
2,302,741	+		MPMX19_02200	0.56	-0.4
2,302,741	+		MPMX19_02200	0.56	+0.4
2,302,741	+		MPMX19_02200	0.56	-1.0
2,302,741	+		MPMX19_02200	0.56	+0.7
2,302,741	+		MPMX19_02200	0.56	+0.6
2,302,741	+		MPMX19_02200	0.56	-0.1
2,302,741	+		MPMX19_02200	0.56	+0.2
2,302,741	+		MPMX19_02200	0.56	+1.3
2,302,741	+		MPMX19_02200	0.56	-1.1
2,302,741	+		MPMX19_02200	0.56	+1.2
2,302,742	-		MPMX19_02200	0.56	+1.0
2,302,742	-		MPMX19_02200	0.56	-0.3
2,302,742	-		MPMX19_02200	0.56	-0.6
2,302,742	-		MPMX19_02200	0.56	-0.4
2,302,742	-		MPMX19_02200	0.56	-0.3
2,302,742	-		MPMX19_02200	0.56	-1.0
2,302,742	-		MPMX19_02200	0.56	-1.0
2,302,742	-		MPMX19_02200	0.56	-0.7
2,302,840	+		MPMX19_02200	0.67	-0.8
2,302,840	+		MPMX19_02200	0.67	-0.6
2,302,840	+		MPMX19_02200	0.67	-1.3
2,302,840	+		MPMX19_02200	0.67	+0.4
2,302,840	+		MPMX19_02200	0.67	+0.8
2,302,840	+		MPMX19_02200	0.67	+1.0
2,302,840	+		MPMX19_02200	0.67	-0.8
2,302,840	+		MPMX19_02200	0.67	-0.8
2,302,840	+		MPMX19_02200	0.67	+1.6
2,302,840	+		MPMX19_02200	0.67	-1.0
2,302,840	+		MPMX19_02200	0.67	+1.9
2,302,840	+		MPMX19_02200	0.67	+1.4
2,302,840	+		MPMX19_02200	0.67	-0.6
2,302,840	+		MPMX19_02200	0.67	+1.2
2,302,840	+		MPMX19_02200	0.67	-0.0
2,302,840	+		MPMX19_02200	0.67	+1.0
2,302,840	+		MPMX19_02200	0.67	-0.8
2,302,840	+		MPMX19_02200	0.67	-0.1
2,302,840	+		MPMX19_02200	0.67	-0.8
2,302,841	-		MPMX19_02200	0.67	-1.0
2,302,841	-		MPMX19_02200	0.67	+0.9
2,302,841	-		MPMX19_02200	0.67	-0.8
2,302,841	-		MPMX19_02200	0.67	+0.2
2,302,841	-		MPMX19_02200	0.67	-0.1
2,302,841	-		MPMX19_02200	0.67	+0.8
2,302,841	-		MPMX19_02200	0.67	-1.0
2,302,841	-		MPMX19_02200	0.67	-0.5
2,302,841	-		MPMX19_02200	0.67	-0.8
2,302,841	-		MPMX19_02200	0.67	-0.4
2,302,841	-		MPMX19_02200	0.67	-0.4
2,302,841	-		MPMX19_02200	0.67	-0.3
2,302,841	-		MPMX19_02200	0.67	-1.0
2,302,841	-		MPMX19_02200	0.67	-0.4
2,302,841	-		MPMX19_02200	0.67	+0.5
2,302,841	-		MPMX19_02200	0.67	-0.4
2,302,841	-		MPMX19_02200	0.67	+0.7
2,302,841	-		MPMX19_02200	0.67	-0.4
2,302,843	+		MPMX19_02200	0.67	+0.8
2,302,843	+		MPMX19_02200	0.67	+0.5
2,302,843	+		MPMX19_02200	0.67	+0.8
2,302,843	+		MPMX19_02200	0.67	+0.2
2,302,843	+		MPMX19_02200	0.67	-0.3
2,302,843	+		MPMX19_02200	0.67	-0.3
2,302,843	+		MPMX19_02200	0.67	+0.5
2,302,843	+		MPMX19_02200	0.67	-0.2
2,302,843	+		MPMX19_02200	0.67	-1.8
2,302,843	+		MPMX19_02200	0.67	-0.2
2,302,843	+		MPMX19_02200	0.67	+1.2
2,302,844	-		MPMX19_02200	0.67	-0.4
2,302,844	-		MPMX19_02200	0.67	-0.1
2,302,844	-		MPMX19_02200	0.67	-1.0
2,302,844	-		MPMX19_02200	0.67	+0.5
2,302,844	-		MPMX19_02200	0.67	-0.2
2,302,844	-		MPMX19_02200	0.67	-1.8
2,302,844	-		MPMX19_02200	0.67	-1.2
2,302,844	-		MPMX19_02200	0.67	-0.7
2,302,951	+		MPMX19_02200	0.79	+0.4
2,302,951	+		MPMX19_02200	0.79	-0.5
2,302,951	+		MPMX19_02200	0.79	+0.0
2,302,951	+		MPMX19_02200	0.79	+0.9
2,302,951	+		MPMX19_02200	0.79	+2.5
2,302,951	+		MPMX19_02200	0.79	+1.1
2,302,951	+		MPMX19_02200	0.79	-0.1
2,302,951	+		MPMX19_02200	0.79	-1.6
2,302,951	+		MPMX19_02200	0.79	-0.0
2,302,951	+		MPMX19_02200	0.79	-0.3
2,302,952	-		MPMX19_02200	0.80	+0.5
2,302,952	-		MPMX19_02200	0.80	+1.1
2,302,952	-		MPMX19_02200	0.80	+0.3
2,302,952	-		MPMX19_02200	0.80	-1.4
2,302,952	-		MPMX19_02200	0.80	-1.1
2,302,952	-		MPMX19_02200	0.80	-0.4
2,303,171	+				-0.9
2,303,171	+				-0.5
2,303,171	+				-0.4
2,303,171	+				+1.6
2,303,172	-				-1.4
2,303,172	-				+0.3
2,303,172	-				-0.9
2,303,204	+				+0.5
2,303,204	+				-1.3
2,303,204	+				+0.5
2,303,204	+				-1.3
2,303,204	+				+0.2
2,303,204	+				+0.4
2,303,204	+				+1.2
2,303,204	+				-0.6
2,303,204	+				+0.1
2,303,204	+				-1.0
2,303,204	+				+0.6
2,303,204	+				+0.2
2,303,204	+				-0.0
2,303,204	+				+1.1
2,303,204	+				-0.9
2,303,205	-				+0.8
2,303,205	-				-1.3
2,303,205	-				-2.2
2,303,205	-				-0.1
2,303,205	-				+0.2
2,303,205	-				+0.6
2,303,205	-				+0.5
2,303,205	-				-0.7
2,303,205	-				-0.2
2,303,205	-				-1.4
2,303,205	-				-2.4
2,303,205	-				-1.0
2,303,205	-				-0.4
2,303,206	+				+0.0
2,303,206	+				+0.6
2,303,206	+				-2.4
2,303,206	+				-0.4
2,303,206	+				-0.8
2,303,206	+				+0.0
2,303,206	+				-0.3
2,303,206	+				-0.3
2,303,206	+				+1.2
2,303,207	-				+0.4
2,303,207	-				-0.8
2,303,207	-				-0.0
2,303,207	-				+0.8
2,303,207	-				+0.2
2,303,207	-				-0.1
2,303,207	-				-0.3
2,303,207	-				+1.2
2,303,207	-				-0.5
2,303,631	+		MPMX19_02201	0.51	-0.7
2,303,631	+		MPMX19_02201	0.51	+0.5
2,303,632	-		MPMX19_02201	0.51	+0.1
2,303,632	-		MPMX19_02201	0.51	+0.0
2,303,632	-		MPMX19_02201	0.51	-0.8
2,303,775	+		MPMX19_02201	0.70	-0.6
2,303,775	+		MPMX19_02201	0.70	-1.3
2,303,775	+		MPMX19_02201	0.70	+0.7
2,303,775	+		MPMX19_02201	0.70	-0.9
2,303,775	+		MPMX19_02201	0.70	-1.3
2,303,775	+		MPMX19_02201	0.70	-0.8
2,303,775	+		MPMX19_02201	0.70	-0.1
2,303,775	+		MPMX19_02201	0.70	-0.4
2,303,775	+		MPMX19_02201	0.70	-0.3
2,303,775	+		MPMX19_02201	0.70	-0.4
2,303,775	+		MPMX19_02201	0.70	-2.6
2,303,775	+		MPMX19_02201	0.70	-1.2
2,303,775	+		MPMX19_02201	0.70	-2.0
2,303,776	-		MPMX19_02201	0.70	-1.8
2,303,776	-		MPMX19_02201	0.70	+0.3
2,303,776	-		MPMX19_02201	0.70	+0.3
2,303,776	-		MPMX19_02201	0.70	-1.4
2,303,776	-		MPMX19_02201	0.70	+1.0
2,303,776	-		MPMX19_02201	0.70	-0.9
2,303,776	-		MPMX19_02201	0.70	+0.1
2,303,776	-		MPMX19_02201	0.70	+0.2
2,303,776	-		MPMX19_02201	0.70	-0.4
2,303,776	-		MPMX19_02201	0.70	-1.4
2,303,776	-		MPMX19_02201	0.70	-0.4
2,303,776	-		MPMX19_02201	0.70	-0.6
2,303,776	-		MPMX19_02201	0.70	-1.8
2,303,776	-		MPMX19_02201	0.70	-0.6
2,303,776	-		MPMX19_02201	0.70	-1.0
2,304,053	+				-1.0
2,304,054	-				-1.0
2,304,093	+				-0.6
2,304,094	-				-0.7
2,304,135	-				-1.1
2,304,511	+		MPMX19_02202	0.67	-0.5
2,304,512	-		MPMX19_02202	0.67	-0.8
2,304,512	-		MPMX19_02202	0.67	+0.2
2,304,604	+		MPMX19_02202	0.84	+0.1
2,304,604	+		MPMX19_02202	0.84	-1.2
2,304,604	+		MPMX19_02202	0.84	-0.9
2,304,604	+		MPMX19_02202	0.84	+0.0
2,304,684	+				-0.1
2,304,685	+				+0.3
2,304,685	+				-0.8
2,304,685	+				-0.7
2,304,685	+				-2.3
2,304,685	+				-1.6
2,304,685	+				+0.4
2,304,685	+				+0.2
2,304,685	+				-2.0
2,304,685	+				-0.5
2,304,685	+				+0.3
2,304,685	+				-0.4
2,304,685	+				-0.0
2,304,685	+				-0.6
2,304,685	+				+0.0
2,304,685	+				-1.3
2,304,686	-				-1.5
2,304,686	-				+1.4
2,304,686	-				-2.6
2,304,686	-				-0.7
2,304,686	-				-0.2
2,304,686	-				-0.1
2,304,686	-				-0.0
2,304,686	-				+0.4
2,304,686	-				-0.1
2,304,686	-				-0.8
2,304,686	-				-0.4
2,304,686	-				-1.1
2,304,686	-				+0.2
2,304,686	-				+0.1
2,304,686	-				-0.8
2,304,686	-				+0.9
2,304,686	-				+0.6
2,304,686	-				-0.8
2,304,686	-				-0.1
2,304,686	-				+0.0
2,304,686	-				-0.7
2,304,686	-				-2.6
2,304,686	-				-0.4
2,304,702	-				-0.6
2,304,797	+				-0.1
2,304,797	+				-0.8
2,304,797	+				-1.2
2,304,798	-				+0.0
2,304,798	-				-0.8
2,304,798	-				-0.3
2,304,809	+				+0.0
2,304,809	+				+1.7
2,304,809	+				-0.6
2,304,810	-				+0.6