Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02122

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,219,432	+		MPMX19_02120	0.84	-0.4
2,219,432	+		MPMX19_02120	0.84	+0.3
2,219,432	+		MPMX19_02120	0.84	+1.3
2,219,433	-		MPMX19_02120	0.85	-0.8
2,219,433	-		MPMX19_02120	0.85	-0.8
2,219,433	-		MPMX19_02120	0.85	+0.4
2,219,550	+				-1.8
2,219,550	+				-0.8
2,219,550	+				+0.3
2,219,550	+				+1.3
2,219,550	+				-0.6
2,219,550	+				-1.4
2,219,550	+				-0.1
2,219,550	+				-0.4
2,219,550	+				-0.6
2,219,551	-				-0.2
2,219,551	-				+0.7
2,219,551	-				+0.3
2,219,551	-				-0.2
2,219,551	-				-0.3
2,219,551	-				+1.5
2,219,551	-				-1.0
2,219,551	-				-0.9
2,219,551	-				-0.8
2,219,551	-				-0.2
2,219,551	-				-0.2
2,219,551	-				-1.2
2,219,645	+		MPMX19_02121	0.12	-1.2
2,219,645	+		MPMX19_02121	0.12	-0.7
2,219,646	-		MPMX19_02121	0.12	+0.6
2,219,652	-		MPMX19_02121	0.13	-1.8
2,219,652	-		MPMX19_02121	0.13	-1.1
2,220,085	+		MPMX19_02121	0.67	+1.6
2,220,085	+		MPMX19_02121	0.67	-0.6
2,220,085	+		MPMX19_02121	0.67	+0.7
2,220,085	+		MPMX19_02121	0.67	+0.3
2,220,085	+		MPMX19_02121	0.67	-1.4
2,220,085	+		MPMX19_02121	0.67	-1.1
2,220,085	+		MPMX19_02121	0.67	-0.8
2,220,085	+		MPMX19_02121	0.67	-1.2
2,220,085	+		MPMX19_02121	0.67	-1.1
2,220,085	+		MPMX19_02121	0.67	+0.2
2,220,085	+		MPMX19_02121	0.67	+0.9
2,220,085	+		MPMX19_02121	0.67	+1.2
2,220,085	+		MPMX19_02121	0.67	-0.5
2,220,085	+		MPMX19_02121	0.67	+0.4
2,220,085	+		MPMX19_02121	0.67	-1.3
2,220,085	+		MPMX19_02121	0.67	+0.2
2,220,086	-		MPMX19_02121	0.67	-0.2
2,220,086	-		MPMX19_02121	0.67	-0.2
2,220,086	-		MPMX19_02121	0.67	-0.3
2,220,086	-		MPMX19_02121	0.67	+1.0
2,220,086	-		MPMX19_02121	0.67	-0.2
2,220,086	-		MPMX19_02121	0.67	+0.6
2,220,086	-		MPMX19_02121	0.67	-0.8
2,220,086	-		MPMX19_02121	0.67	-1.2
2,220,086	-		MPMX19_02121	0.67	-2.7
2,220,086	-		MPMX19_02121	0.67	-0.7
2,220,086	-		MPMX19_02121	0.67	+0.2
2,220,086	-		MPMX19_02121	0.67	+0.7
2,220,086	-		MPMX19_02121	0.67	-0.9
2,220,086	-		MPMX19_02121	0.67	-0.8
2,220,086	-		MPMX19_02121	0.67	-2.1
2,220,086	-		MPMX19_02121	0.67	-0.4
2,220,086	-		MPMX19_02121	0.67	+0.1
2,220,086	-		MPMX19_02121	0.67	-0.4
2,220,086	-		MPMX19_02121	0.67	+0.2
2,220,086	-		MPMX19_02121	0.67	-1.4
2,220,086	-		MPMX19_02121	0.67	-0.8
2,220,086	-		MPMX19_02121	0.67	-2.1
2,220,086	-		MPMX19_02121	0.67	-1.6
2,220,086	-		MPMX19_02121	0.67	-0.3
2,220,086	-		MPMX19_02121	0.67	-1.0
2,220,086	-		MPMX19_02121	0.67	-0.5
2,220,086	-		MPMX19_02121	0.67	-0.7
2,220,086	-		MPMX19_02121	0.67	+2.6
2,220,088	+		MPMX19_02121	0.68	+1.6
2,220,088	+		MPMX19_02121	0.68	-0.3
2,220,088	+		MPMX19_02121	0.68	+1.3
2,220,088	+		MPMX19_02121	0.68	-0.8
2,220,088	+		MPMX19_02121	0.68	-0.5
2,220,088	+		MPMX19_02121	0.68	-0.2
2,220,088	+		MPMX19_02121	0.68	-0.4
2,220,088	+		MPMX19_02121	0.68	-1.4
2,220,088	+		MPMX19_02121	0.68	+1.7
2,220,088	+		MPMX19_02121	0.68	+0.5
2,220,089	-		MPMX19_02121	0.68	-0.0
2,220,089	-		MPMX19_02121	0.68	+0.4
2,220,089	-		MPMX19_02121	0.68	-0.8
2,220,089	-		MPMX19_02121	0.68	+1.2
2,220,089	-		MPMX19_02121	0.68	-2.4
2,220,089	-		MPMX19_02121	0.68	+0.2
2,220,089	-		MPMX19_02121	0.68	-0.8
2,220,089	-		MPMX19_02121	0.68	-0.8
2,220,089	-		MPMX19_02121	0.68	-0.7
2,220,139	+		MPMX19_02121	0.74	+0.8
2,220,139	+		MPMX19_02121	0.74	+0.0
2,220,140	-		MPMX19_02121	0.74	-0.5
2,220,254	-		MPMX19_02121	0.88	-0.6
2,220,254	-		MPMX19_02121	0.88	-1.0
2,220,254	-		MPMX19_02121	0.88	-1.4
2,220,277	+				-1.4
2,220,277	+				+0.8
2,220,277	+				-0.8
2,220,420	+		MPMX19_02122	0.14	-0.7
2,220,420	+		MPMX19_02122	0.14	+1.2
2,220,420	+		MPMX19_02122	0.14	-0.4
2,220,420	+		MPMX19_02122	0.14	-1.5
2,220,420	+		MPMX19_02122	0.14	-0.7
2,220,420	+		MPMX19_02122	0.14	-2.9
2,220,420	+		MPMX19_02122	0.14	-1.4
2,220,420	+		MPMX19_02122	0.14	-1.5
2,220,420	+		MPMX19_02122	0.14	-2.1
2,220,421	-		MPMX19_02122	0.14	-0.4
2,220,421	-		MPMX19_02122	0.14	-0.1
2,220,421	-		MPMX19_02122	0.14	-0.4
2,220,421	-		MPMX19_02122	0.14	-2.0
2,220,421	-		MPMX19_02122	0.14	-0.4
2,220,421	-		MPMX19_02122	0.14	+1.2
2,220,615	+		MPMX19_02122	0.59	-0.7
2,220,615	+		MPMX19_02122	0.59	-0.7
2,220,616	-		MPMX19_02122	0.59	-0.9
2,220,616	-		MPMX19_02122	0.59	+1.2
2,220,616	-		MPMX19_02122	0.59	+0.6
2,220,736	+		MPMX19_02122	0.87	-0.0
2,220,737	-		MPMX19_02122	0.87	-2.5
2,220,888	+				+0.2
2,220,888	+				+1.1
2,220,888	+				-0.2
2,220,888	+				-2.4
2,220,888	+				+0.0
2,220,889	-				-0.4
2,220,893	+				-0.8
2,220,893	+				+0.7
2,220,893	+				-0.0
2,220,893	+				-1.8
2,220,893	+				-0.4
2,220,893	+				-0.0
2,220,893	+				+0.3
2,220,894	-				-0.8
2,220,894	-				-1.7
2,220,894	-				-1.4
2,220,894	-				-0.8
2,220,894	-				-0.8
2,220,929	+				-1.1
2,221,078	-		MPMX19_02123	0.15	+0.4
2,221,079	+		MPMX19_02123	0.15	+1.6
2,221,079	+		MPMX19_02123	0.15	+0.1
2,221,079	+		MPMX19_02123	0.15	+0.8
2,221,079	+		MPMX19_02123	0.15	+0.6
2,221,080	-		MPMX19_02123	0.15	-1.2
2,221,080	-		MPMX19_02123	0.15	+0.6
2,221,080	-		MPMX19_02123	0.15	-0.7
2,221,080	-		MPMX19_02123	0.15	+0.6
2,221,080	-		MPMX19_02123	0.15	-0.0
2,221,080	-		MPMX19_02123	0.15	-1.4
2,221,080	-		MPMX19_02123	0.15	+0.9
2,221,080	-		MPMX19_02123	0.15	+1.0
2,221,080	-		MPMX19_02123	0.15	+0.2
2,221,080	-		MPMX19_02123	0.15	+0.9
2,221,404	-		MPMX19_02123	0.47	-1.2
2,221,672	-		MPMX19_02123	0.73	-1.2
2,221,672	-		MPMX19_02123	0.73	-1.8
2,221,778	+		MPMX19_02123	0.83	+0.3
2,221,778	+		MPMX19_02123	0.83	-0.2
2,221,779	-		MPMX19_02123	0.83	-1.0
2,221,779	-		MPMX19_02123	0.83	+0.2