Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02068

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,163,166	+		MPMX19_02067	0.80	-0.5
2,163,166	+		MPMX19_02067	0.80	-1.1
2,163,166	+		MPMX19_02067	0.80	-1.1
2,163,166	+		MPMX19_02067	0.80	+0.7
2,163,166	+		MPMX19_02067	0.80	-0.2
2,163,167	-		MPMX19_02067	0.80	-0.8
2,163,167	-		MPMX19_02067	0.80	-1.6
2,163,226	+		MPMX19_02067	0.85	-0.2
2,163,226	+		MPMX19_02067	0.85	+1.0
2,163,226	+		MPMX19_02067	0.85	+0.1
2,163,226	+		MPMX19_02067	0.85	-0.2
2,163,226	+		MPMX19_02067	0.85	+0.4
2,163,226	+		MPMX19_02067	0.85	+0.8
2,163,226	+		MPMX19_02067	0.85	-1.0
2,163,226	+		MPMX19_02067	0.85	-0.7
2,163,226	+		MPMX19_02067	0.85	+0.2
2,163,226	+		MPMX19_02067	0.85	-0.1
2,163,226	+		MPMX19_02067	0.85	-0.6
2,163,227	-		MPMX19_02067	0.85	-1.2
2,163,227	-		MPMX19_02067	0.85	-0.7
2,163,227	-		MPMX19_02067	0.85	+0.0
2,163,227	-		MPMX19_02067	0.85	-1.5
2,163,227	-		MPMX19_02067	0.85	+0.9
2,163,227	-		MPMX19_02067	0.85	-0.2
2,163,227	-		MPMX19_02067	0.85	-0.2
2,163,227	-		MPMX19_02067	0.85	-0.4
2,163,653	+				-0.1
2,163,653	+				-2.4
2,163,774	+				-0.6
2,163,775	-				-0.2
2,163,775	-				+0.1
2,163,776	+				+0.1
2,163,776	+				+1.1
2,163,776	+				-0.5
2,163,776	+				-1.1
2,163,776	+				+0.1
2,163,776	+				-0.3
2,163,777	-				+0.7
2,163,777	-				-1.2
2,163,777	-				+1.1
2,163,777	-				+3.1
2,163,777	-				-2.5
2,163,777	-				-1.1
2,163,777	-				+0.4
2,163,777	-				+0.7
2,163,777	-				-1.1
2,163,777	-				+0.6
2,163,932	+				-0.2
2,163,932	+				+0.1
2,163,932	+				-1.2
2,163,933	-				-0.2
2,163,933	-				-0.6
2,163,933	-				-0.2
2,164,094	+		MPMX19_02068	0.26	-0.5
2,164,094	+		MPMX19_02068	0.26	+0.5
2,164,095	-		MPMX19_02068	0.26	-0.2
2,164,095	-		MPMX19_02068	0.26	+1.1
2,164,095	-		MPMX19_02068	0.26	+0.9
2,164,095	-		MPMX19_02068	0.26	+0.1
2,164,095	-		MPMX19_02068	0.26	-0.7
2,164,148	+		MPMX19_02068	0.32	+0.3
2,164,148	+		MPMX19_02068	0.32	-0.1
2,164,148	+		MPMX19_02068	0.32	-0.5
2,164,148	+		MPMX19_02068	0.32	+1.1
2,164,148	+		MPMX19_02068	0.32	-0.1
2,164,148	+		MPMX19_02068	0.32	-0.9
2,164,148	+		MPMX19_02068	0.32	-0.1
2,164,148	+		MPMX19_02068	0.32	+1.5
2,164,148	+		MPMX19_02068	0.32	+0.1
2,164,148	+		MPMX19_02068	0.32	-0.1
2,164,148	+		MPMX19_02068	0.32	+0.3
2,164,148	+		MPMX19_02068	0.32	-0.2
2,164,148	+		MPMX19_02068	0.32	+0.3
2,164,148	+		MPMX19_02068	0.32	-0.0
2,164,149	-		MPMX19_02068	0.32	-0.3
2,164,149	-		MPMX19_02068	0.32	-0.9
2,164,149	-		MPMX19_02068	0.32	-0.5
2,164,149	-		MPMX19_02068	0.32	-0.1
2,164,149	-		MPMX19_02068	0.32	-1.2
2,164,149	-		MPMX19_02068	0.32	+0.5
2,164,149	-		MPMX19_02068	0.32	-0.8
2,164,149	-		MPMX19_02068	0.32	+0.5
2,164,149	-		MPMX19_02068	0.32	-1.3
2,164,149	-		MPMX19_02068	0.32	-1.3
2,164,286	+		MPMX19_02068	0.47	-2.1
2,164,286	+		MPMX19_02068	0.47	-0.3
2,164,286	+		MPMX19_02068	0.47	-0.9
2,164,286	+		MPMX19_02068	0.47	-0.5
2,164,286	+		MPMX19_02068	0.47	+0.1
2,164,287	-		MPMX19_02068	0.47	+0.2
2,164,287	-		MPMX19_02068	0.47	-2.1
2,164,287	-		MPMX19_02068	0.47	-2.4
2,164,287	-		MPMX19_02068	0.47	-0.7
2,164,287	-		MPMX19_02068	0.47	+0.2
2,164,287	-		MPMX19_02068	0.47	-0.5
2,164,287	-		MPMX19_02068	0.47	+0.0
2,164,454	+		MPMX19_02068	0.64	+0.8
2,164,454	+		MPMX19_02068	0.64	-0.7
2,164,454	+		MPMX19_02068	0.64	-0.4
2,164,454	+		MPMX19_02068	0.64	+0.5
2,164,454	+		MPMX19_02068	0.64	-0.9
2,164,454	+		MPMX19_02068	0.64	-0.3
2,164,454	+		MPMX19_02068	0.64	-0.8
2,164,454	+		MPMX19_02068	0.64	-0.3
2,164,454	+		MPMX19_02068	0.64	-0.8
2,164,454	+		MPMX19_02068	0.64	-0.6
2,164,454	+		MPMX19_02068	0.64	+0.4
2,164,454	+		MPMX19_02068	0.64	+0.5
2,164,454	+		MPMX19_02068	0.64	-1.3
2,164,454	+		MPMX19_02068	0.64	-0.8
2,164,454	+		MPMX19_02068	0.64	-1.2
2,164,455	-		MPMX19_02068	0.65	-0.5
2,164,455	-		MPMX19_02068	0.65	+1.2
2,164,455	-		MPMX19_02068	0.65	-0.7
2,164,455	-		MPMX19_02068	0.65	+0.5
2,164,455	-		MPMX19_02068	0.65	-1.0
2,164,790	+				-0.1
2,164,790	+				-0.3
2,164,790	+				-2.3
2,164,790	+				+0.4
2,164,791	-				+0.3
2,164,791	-				+0.3
2,164,791	-				+0.2
2,164,791	-				-0.1
2,164,791	-				+0.8
2,164,791	-				-0.2
2,164,791	-				-0.6
2,164,792	+				-0.9
2,164,792	+				+0.4
2,164,792	+				-1.0
2,164,792	+				-0.7
2,164,792	+				-1.7
2,164,792	+				-0.3
2,164,792	+				+0.5
2,164,792	+				-1.9
2,164,792	+				-1.1
2,164,792	+				-1.2
2,164,792	+				+1.1
2,164,792	+				+1.1
2,164,792	+				-1.1
2,164,792	+				-0.9
2,164,792	+				-1.6
2,164,792	+				-1.5
2,164,793	-				+0.4
2,164,793	-				-1.1
2,164,793	-				+0.6
2,164,793	-				+0.8
2,164,793	-				-1.0
2,164,793	-				-1.3
2,164,793	-				+0.3
2,164,793	-				-0.2
2,164,793	-				-0.9
2,164,793	-				-0.1
2,164,793	-				+0.4
2,164,793	-				-1.5
2,164,874	+				-1.6
2,164,874	+				-1.1
2,164,874	+				-0.7
2,164,874	+				-0.6
2,164,874	+				-0.5
2,164,874	+				+0.4
2,164,874	+				-0.2
2,164,875	-				-0.3
2,164,875	-				+0.1
2,164,936	+				-0.7
2,164,966	+				-0.4
2,164,966	+				-0.5
2,164,966	+				-1.8
2,164,967	-				+0.1
2,164,967	-				-0.8
2,164,967	-				-0.5
2,164,967	-				+0.5
2,164,967	-				-1.8
2,164,967	-				+0.3
2,164,967	-				+1.3
2,164,967	-				+0.4
2,165,310	+		MPMX19_02069	0.80	+0.7
2,165,310	+		MPMX19_02069	0.80	-0.2
2,165,310	+		MPMX19_02069	0.80	-0.8
2,165,311	-		MPMX19_02069	0.80	-1.1
2,165,320	+		MPMX19_02069	0.82	+2.7
2,165,320	+		MPMX19_02069	0.82	-1.3
2,165,320	+		MPMX19_02069	0.82	+0.1
2,165,320	+		MPMX19_02069	0.82	-1.2
2,165,320	+		MPMX19_02069	0.82	-1.0
2,165,320	+		MPMX19_02069	0.82	-1.5
2,165,320	+		MPMX19_02069	0.82	+0.7
2,165,320	+		MPMX19_02069	0.82	-0.5
2,165,320	+		MPMX19_02069	0.82	-0.5
2,165,320	+		MPMX19_02069	0.82	-1.1
2,165,320	+		MPMX19_02069	0.82	-0.9
2,165,320	+		MPMX19_02069	0.82	-1.1
2,165,320	+		MPMX19_02069	0.82	-0.7
2,165,321	-		MPMX19_02069	0.82	-0.2
2,165,321	-		MPMX19_02069	0.82	+0.5
2,165,321	-		MPMX19_02069	0.82	+0.2
2,165,321	-		MPMX19_02069	0.82	-0.2
2,165,321	-		MPMX19_02069	0.82	+0.1
2,165,321	-		MPMX19_02069	0.82	+0.0
2,165,321	-		MPMX19_02069	0.82	-1.7
2,165,321	-		MPMX19_02069	0.82	+2.1
2,165,321	-		MPMX19_02069	0.82	+0.8
2,165,505	+				+0.3
2,165,672	+				-1.1
2,165,672	+				+0.9
2,165,672	+				-0.9
2,165,672	+				-1.4
2,165,672	+				-1.2
2,165,672	+				-1.7
2,165,672	+				+1.8
2,165,672	+				+1.4
2,165,672	+				+0.9
2,165,672	+				-1.4
2,165,672	+				-0.2
2,165,672	+				+0.1
2,165,672	+				+0.3
2,165,672	+				-1.3
2,165,673	-				-0.1
2,165,673	-				-0.7
2,165,673	-				-1.1
2,165,673	-				-0.2
2,165,673	-				-2.2
2,165,673	-				-0.2
2,165,673	-				-0.7
2,165,673	-				+1.1
2,165,673	-				+3.1
2,165,673	-				-1.1
2,165,673	-				+0.1
2,165,673	-				+0.5
2,165,673	-				-1.6
2,165,729	+				-1.3
2,165,729	+				-0.0
2,165,730	-				+1.1
2,165,730	-				-0.2
2,165,774	+		MPMX19_02070	0.11	+1.4
2,165,774	+		MPMX19_02070	0.11	+0.5
2,165,774	+		MPMX19_02070	0.11	-1.1
2,165,774	+		MPMX19_02070	0.11	-1.1
2,165,774	+		MPMX19_02070	0.11	+0.9
2,165,774	+		MPMX19_02070	0.11	-1.1
2,165,774	+		MPMX19_02070	0.11	+0.5
2,165,774	+		MPMX19_02070	0.11	-0.5
2,165,774	+		MPMX19_02070	0.11	-0.0
2,165,774	+		MPMX19_02070	0.11	-0.6
2,165,774	+		MPMX19_02070	0.11	-0.3
2,165,774	+		MPMX19_02070	0.11	-1.5
2,165,774	+		MPMX19_02070	0.11	+0.1
2,165,774	+		MPMX19_02070	0.11	-0.5
2,165,775	-		MPMX19_02070	0.11	-0.5
2,165,775	-		MPMX19_02070	0.11	-0.3
2,165,775	-		MPMX19_02070	0.11	+1.1
2,165,775	-		MPMX19_02070	0.11	+0.8
2,165,775	-		MPMX19_02070	0.11	-0.2
2,165,775	-		MPMX19_02070	0.11	+1.1
2,165,775	-		MPMX19_02070	0.11	-0.7
2,165,775	-		MPMX19_02070	0.11	-1.0
2,165,775	-		MPMX19_02070	0.11	-1.1