Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02049

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,145,068	+		MPMX19_02048	0.16	-0.5
2,145,068	+		MPMX19_02048	0.16	-0.2
2,145,069	-		MPMX19_02048	0.17	-0.3
2,145,150	+		MPMX19_02048	0.27	-0.3
2,145,151	-		MPMX19_02048	0.28	-0.2
2,145,324	+		MPMX19_02048	0.51	-2.0
2,145,324	+		MPMX19_02048	0.51	+0.5
2,145,324	+		MPMX19_02048	0.51	-0.5
2,145,324	+		MPMX19_02048	0.51	-1.1
2,145,324	+		MPMX19_02048	0.51	+0.0
2,145,324	+		MPMX19_02048	0.51	-2.3
2,145,325	-		MPMX19_02048	0.51	+0.3
2,145,325	-		MPMX19_02048	0.51	+0.5
2,145,325	-		MPMX19_02048	0.51	-0.2
2,145,325	-		MPMX19_02048	0.51	+0.0
2,145,325	-		MPMX19_02048	0.51	+1.1
2,145,325	-		MPMX19_02048	0.51	+0.4
2,145,396	+		MPMX19_02048	0.60	-0.4
2,145,547	+		MPMX19_02048	0.81	-0.7
2,145,547	+		MPMX19_02048	0.81	-2.1
2,145,547	+		MPMX19_02048	0.81	-1.5
2,145,547	+		MPMX19_02048	0.81	-0.5
2,145,547	+		MPMX19_02048	0.81	-1.2
2,145,547	+		MPMX19_02048	0.81	-0.4
2,145,548	-		MPMX19_02048	0.81	+0.3
2,145,548	-		MPMX19_02048	0.81	+0.5
2,145,548	-		MPMX19_02048	0.81	+1.1
2,145,548	-		MPMX19_02048	0.81	-0.4
2,145,548	-		MPMX19_02048	0.81	+0.2
2,145,548	-		MPMX19_02048	0.81	+0.1
2,145,564	+		MPMX19_02048	0.83	-0.5
2,145,564	+		MPMX19_02048	0.83	-1.5
2,145,564	+		MPMX19_02048	0.83	-2.4
2,145,564	+		MPMX19_02048	0.83	-0.3
2,145,564	+		MPMX19_02048	0.83	-0.8
2,145,691	-				-1.5
2,145,691	-				-0.3
2,145,704	-				-2.4
2,145,704	-				-0.7
2,145,867	+				+0.3
2,145,867	+				-1.1
2,145,868	-				-3.3
2,145,868	-				-2.4
2,145,868	-				-0.0
2,145,868	-				-1.4
2,145,868	-				-0.1
2,145,868	-				-0.4
2,145,868	-				-0.6
2,145,868	-				-0.7
2,145,868	-				-0.0
2,145,868	-				-1.2
2,146,170	+		MPMX19_02049	0.73	+0.8
2,146,170	+		MPMX19_02049	0.73	-1.6
2,146,170	+		MPMX19_02049	0.73	+0.5
2,146,170	+		MPMX19_02049	0.73	-0.5
2,146,170	+		MPMX19_02049	0.73	+1.2
2,146,170	+		MPMX19_02049	0.73	+1.4
2,146,170	+		MPMX19_02049	0.73	-0.9
2,146,170	+		MPMX19_02049	0.73	+0.8
2,146,170	+		MPMX19_02049	0.73	+0.0
2,146,170	+		MPMX19_02049	0.73	-2.4
2,146,170	+		MPMX19_02049	0.73	+1.5
2,146,171	-		MPMX19_02049	0.73	-0.9
2,146,171	-		MPMX19_02049	0.73	-0.7
2,146,171	-		MPMX19_02049	0.73	-0.1
2,146,171	-		MPMX19_02049	0.73	+0.7
2,146,171	-		MPMX19_02049	0.73	+0.3
2,146,171	-		MPMX19_02049	0.73	-0.2
2,146,171	-		MPMX19_02049	0.73	-0.2
2,146,171	-		MPMX19_02049	0.73	-1.5
2,146,171	-		MPMX19_02049	0.73	+0.1
2,146,171	-		MPMX19_02049	0.73	-0.2
2,146,171	-		MPMX19_02049	0.73	-0.1
2,146,171	-		MPMX19_02049	0.73	-1.4
2,146,276	+				-0.9
2,146,276	+				-1.5
2,146,276	+				-0.0
2,146,276	+				-1.1
2,146,277	-				-0.6
2,146,277	-				+0.1
2,146,400	+				-1.4
2,146,400	+				-1.1
2,146,400	+				-0.0
2,146,400	+				+0.9
2,146,401	-				-0.5
2,146,401	-				-0.7
2,146,401	-				-1.0
2,146,401	-				-0.5
2,146,401	-				-0.8
2,146,802	+		MPMX19_02050	0.11	+0.1
2,146,802	+		MPMX19_02050	0.11	-0.4
2,146,802	+		MPMX19_02050	0.11	+1.6
2,146,803	-		MPMX19_02050	0.11	-2.0
2,146,803	-		MPMX19_02050	0.11	+1.1
2,146,803	-		MPMX19_02050	0.11	-0.1
2,146,803	-		MPMX19_02050	0.11	-0.1
2,147,225	+		MPMX19_02050	0.36	+0.5
2,147,225	+		MPMX19_02050	0.36	-0.9
2,147,225	+		MPMX19_02050	0.36	-0.9
2,147,225	+		MPMX19_02050	0.36	+0.2
2,147,226	-		MPMX19_02050	0.36	-1.1
2,147,226	-		MPMX19_02050	0.36	-0.2
2,147,226	-		MPMX19_02050	0.36	-0.1
2,147,226	-		MPMX19_02050	0.36	-0.2