Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02046

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,139,456	+		MPMX19_02045	0.68	-1.6
2,139,519	+		MPMX19_02045	0.71	+0.7
2,139,519	+		MPMX19_02045	0.71	+0.8
2,139,519	+		MPMX19_02045	0.71	-0.8
2,139,520	-		MPMX19_02045	0.71	-0.4
2,139,520	-		MPMX19_02045	0.71	+0.5
2,139,520	-		MPMX19_02045	0.71	-0.6
2,139,520	-		MPMX19_02045	0.71	+0.3
2,139,520	-		MPMX19_02045	0.71	-1.8
2,139,520	-		MPMX19_02045	0.71	-2.4
2,139,520	-		MPMX19_02045	0.71	-0.4
2,139,520	-		MPMX19_02045	0.71	+0.3
2,139,520	-		MPMX19_02045	0.71	+0.5
2,139,520	-		MPMX19_02045	0.71	-1.4
2,139,543	+		MPMX19_02045	0.72	-0.1
2,139,543	+		MPMX19_02045	0.72	-0.2
2,139,543	+		MPMX19_02045	0.72	-0.7
2,139,543	+		MPMX19_02045	0.72	-0.5
2,139,543	+		MPMX19_02045	0.72	-0.5
2,139,543	+		MPMX19_02045	0.72	-0.1
2,139,543	+		MPMX19_02045	0.72	-0.2
2,139,543	+		MPMX19_02045	0.72	+0.9
2,139,543	+		MPMX19_02045	0.72	+0.1
2,139,543	+		MPMX19_02045	0.72	+0.9
2,139,543	+		MPMX19_02045	0.72	+1.1
2,139,543	+		MPMX19_02045	0.72	-1.1
2,139,543	+		MPMX19_02045	0.72	-1.1
2,139,543	+		MPMX19_02045	0.72	-1.4
2,139,543	+		MPMX19_02045	0.72	+1.1
2,139,543	+		MPMX19_02045	0.72	-2.4
2,139,543	+		MPMX19_02045	0.72	-1.6
2,139,543	+		MPMX19_02045	0.72	-0.5
2,139,543	+		MPMX19_02045	0.72	-0.4
2,139,543	+		MPMX19_02045	0.72	+0.1
2,139,544	-		MPMX19_02045	0.72	-1.4
2,139,544	-		MPMX19_02045	0.72	-0.1
2,139,544	-		MPMX19_02045	0.72	-1.1
2,139,544	-		MPMX19_02045	0.72	+0.1
2,139,544	-		MPMX19_02045	0.72	+1.5
2,139,544	-		MPMX19_02045	0.72	+0.2
2,139,544	-		MPMX19_02045	0.72	-0.1
2,139,544	-		MPMX19_02045	0.72	+0.9
2,139,544	-		MPMX19_02045	0.72	-1.6
2,139,544	-		MPMX19_02045	0.72	-0.2
2,139,544	-		MPMX19_02045	0.72	-0.9
2,139,544	-		MPMX19_02045	0.72	-0.9
2,139,544	-		MPMX19_02045	0.72	-0.1
2,139,544	-		MPMX19_02045	0.72	-0.1
2,139,544	-		MPMX19_02045	0.72	+0.6
2,139,544	-		MPMX19_02045	0.72	-1.2
2,139,544	-		MPMX19_02045	0.72	+0.2
2,139,544	-		MPMX19_02045	0.72	-1.6
2,139,544	-		MPMX19_02045	0.72	-0.9
2,139,702	+		MPMX19_02045	0.77	+1.1
2,139,703	-		MPMX19_02045	0.78	+0.7
2,139,703	-		MPMX19_02045	0.78	+0.7
2,139,703	-		MPMX19_02045	0.78	-0.5
2,139,703	-		MPMX19_02045	0.78	+0.1
2,139,703	-		MPMX19_02045	0.78	-0.6
2,139,714	+		MPMX19_02045	0.78	-0.1
2,139,714	+		MPMX19_02045	0.78	+0.3
2,139,714	+		MPMX19_02045	0.78	-0.5
2,139,714	+		MPMX19_02045	0.78	+0.2
2,139,714	+		MPMX19_02045	0.78	-0.2
2,139,714	+		MPMX19_02045	0.78	-1.1
2,139,714	+		MPMX19_02045	0.78	-1.8
2,139,714	+		MPMX19_02045	0.78	-2.0
2,139,714	+		MPMX19_02045	0.78	-0.2
2,139,714	+		MPMX19_02045	0.78	-0.1
2,139,714	+		MPMX19_02045	0.78	+0.5
2,139,714	+		MPMX19_02045	0.78	-2.4
2,139,714	+		MPMX19_02045	0.78	-0.7
2,139,714	+		MPMX19_02045	0.78	-1.1
2,139,715	-		MPMX19_02045	0.78	-0.5
2,139,715	-		MPMX19_02045	0.78	-1.2
2,139,715	-		MPMX19_02045	0.78	+0.9
2,139,715	-		MPMX19_02045	0.78	+0.9
2,139,715	-		MPMX19_02045	0.78	+0.2
2,139,715	-		MPMX19_02045	0.78	-0.9
2,139,715	-		MPMX19_02045	0.78	+0.1
2,139,715	-		MPMX19_02045	0.78	-0.7
2,139,715	-		MPMX19_02045	0.78	-0.9
2,139,715	-		MPMX19_02045	0.78	-1.7
2,139,715	-		MPMX19_02045	0.78	-1.7
2,139,744	+		MPMX19_02045	0.79	-0.1
2,139,744	+		MPMX19_02045	0.79	-0.5
2,139,745	-		MPMX19_02045	0.79	-1.6
2,139,745	-		MPMX19_02045	0.79	+0.3
2,139,745	-		MPMX19_02045	0.79	-1.0
2,139,745	-		MPMX19_02045	0.79	-2.1
2,139,745	-		MPMX19_02045	0.79	-0.5
2,139,852	+		MPMX19_02045	0.83	-1.5
2,139,879	+		MPMX19_02045	0.84	-0.0
2,139,879	+		MPMX19_02045	0.84	-0.1
2,139,879	+		MPMX19_02045	0.84	-2.8
2,139,879	+		MPMX19_02045	0.84	-1.5
2,139,879	+		MPMX19_02045	0.84	-1.4
2,139,879	+		MPMX19_02045	0.84	+0.6
2,139,879	+		MPMX19_02045	0.84	-1.2
2,139,879	+		MPMX19_02045	0.84	-0.5
2,139,879	+		MPMX19_02045	0.84	+0.5
2,139,879	+		MPMX19_02045	0.84	+0.5
2,139,880	-		MPMX19_02045	0.84	-0.2
2,139,880	-		MPMX19_02045	0.84	-0.5
2,139,880	-		MPMX19_02045	0.84	-1.5
2,139,880	-		MPMX19_02045	0.84	+0.2
2,139,880	-		MPMX19_02045	0.84	-0.8
2,139,897	+		MPMX19_02045	0.85	-0.2
2,139,897	+		MPMX19_02045	0.85	-0.3
2,139,942	+		MPMX19_02045	0.86	+0.1
2,139,942	+		MPMX19_02045	0.86	-0.5
2,139,942	+		MPMX19_02045	0.86	+0.3
2,139,943	-		MPMX19_02045	0.86	+2.1
2,139,943	-		MPMX19_02045	0.86	-0.5
2,139,943	-		MPMX19_02045	0.86	-0.2
2,139,943	-		MPMX19_02045	0.86	-0.0
2,140,235	+				+0.3
2,140,254	+				-0.4
2,140,254	+				-0.8
2,140,254	+				-0.8
2,140,255	-				-1.1
2,140,255	-				-0.6
2,140,255	-				-0.9
2,140,255	-				+1.4
2,140,255	-				+0.9
2,140,258	-				+2.9
2,140,258	-				-0.2
2,140,258	-				-0.5
2,140,305	+				-1.5
2,140,305	+				-0.3
2,140,305	+				-1.6
2,140,305	+				-0.5
2,140,305	+				+0.2
2,140,305	+				+0.4
2,140,305	+				-0.2
2,140,305	+				-0.1
2,140,305	+				-1.5
2,140,306	-				-1.6
2,140,306	-				-0.0
2,140,306	-				+0.5
2,140,306	-				-0.2
2,140,306	-				+0.7
2,140,306	-				-1.1
2,140,306	-				-1.5
2,140,597	+				-0.9
2,140,597	+				-1.1
2,140,598	-				+0.8
2,140,598	-				-0.0
2,140,684	+				-0.3
2,140,684	+				-0.5
2,140,684	+				-0.1
2,140,685	-				-0.2
2,140,685	-				-0.0
2,140,685	-				-0.7
2,140,685	-				-0.8
2,141,242	+		MPMX19_02046	0.27	-0.4
2,141,242	+		MPMX19_02046	0.27	+1.9
2,141,243	-		MPMX19_02046	0.27	-0.5
2,141,243	-		MPMX19_02046	0.27	-1.0
2,141,366	-		MPMX19_02046	0.31	-0.8
2,141,566	+		MPMX19_02046	0.38	+0.8
2,141,566	+		MPMX19_02046	0.38	+0.1
2,141,566	+		MPMX19_02046	0.38	+0.9
2,141,566	+		MPMX19_02046	0.38	+0.5
2,141,566	+		MPMX19_02046	0.38	-1.7
2,141,566	+		MPMX19_02046	0.38	-0.9
2,141,566	+		MPMX19_02046	0.38	-1.3
2,141,566	+		MPMX19_02046	0.38	+0.3
2,141,566	+		MPMX19_02046	0.38	-0.9
2,141,567	-		MPMX19_02046	0.38	+0.1
2,141,567	-		MPMX19_02046	0.38	+0.1
2,141,567	-		MPMX19_02046	0.38	+0.3
2,141,567	-		MPMX19_02046	0.38	-1.9
2,141,567	-		MPMX19_02046	0.38	+1.1
2,141,953	+		MPMX19_02046	0.50	+0.9
2,141,953	+		MPMX19_02046	0.50	+0.0
2,141,953	+		MPMX19_02046	0.50	-0.8
2,141,954	-		MPMX19_02046	0.50	-0.2
2,141,954	-		MPMX19_02046	0.50	+0.5
2,141,954	-		MPMX19_02046	0.50	-0.7
2,141,954	-		MPMX19_02046	0.50	+0.8
2,141,954	-		MPMX19_02046	0.50	+0.2
2,141,954	-		MPMX19_02046	0.50	-0.1
2,142,385	+		MPMX19_02046	0.64	-1.5
2,142,385	+		MPMX19_02046	0.64	+1.0
2,142,385	+		MPMX19_02046	0.64	+0.1
2,142,385	+		MPMX19_02046	0.64	-0.2
2,142,385	+		MPMX19_02046	0.64	-2.5
2,142,385	+		MPMX19_02046	0.64	+0.8
2,142,385	+		MPMX19_02046	0.64	+0.5
2,142,385	+		MPMX19_02046	0.64	-1.1
2,142,385	+		MPMX19_02046	0.64	-0.2
2,142,386	-		MPMX19_02046	0.64	+0.1
2,142,386	-		MPMX19_02046	0.64	-0.1
2,142,386	-		MPMX19_02046	0.64	+0.8
2,142,386	-		MPMX19_02046	0.64	+0.3
2,142,386	-		MPMX19_02046	0.64	+0.5
2,142,386	-		MPMX19_02046	0.64	-1.6
2,142,485	-		MPMX19_02046	0.67	-0.2
2,142,838	+		MPMX19_02046	0.79	-0.2
2,142,838	+		MPMX19_02046	0.79	-0.4
2,142,838	+		MPMX19_02046	0.79	+0.1
2,142,838	+		MPMX19_02046	0.79	-1.1
2,142,838	+		MPMX19_02046	0.79	-0.4
2,142,838	+		MPMX19_02046	0.79	+0.3
2,142,838	+		MPMX19_02046	0.79	-0.8
2,142,838	+		MPMX19_02046	0.79	+0.5
2,142,838	+		MPMX19_02046	0.79	+0.9
2,142,838	+		MPMX19_02046	0.79	+0.5
2,142,838	+		MPMX19_02046	0.79	+2.1
2,142,838	+		MPMX19_02046	0.79	-0.8
2,142,838	+		MPMX19_02046	0.79	-0.6
2,142,838	+		MPMX19_02046	0.79	-1.8
2,142,838	+		MPMX19_02046	0.79	-0.3
2,142,839	-		MPMX19_02046	0.79	-0.9
2,142,839	-		MPMX19_02046	0.79	-0.2
2,142,839	-		MPMX19_02046	0.79	-0.5
2,142,839	-		MPMX19_02046	0.79	-1.7
2,142,839	-		MPMX19_02046	0.79	+0.5
2,142,839	-		MPMX19_02046	0.79	-0.2
2,142,839	-		MPMX19_02046	0.79	+0.3
2,142,839	-		MPMX19_02046	0.79	+0.2
2,142,839	-		MPMX19_02046	0.79	+0.4
2,142,839	-		MPMX19_02046	0.79	-0.5
2,142,839	-		MPMX19_02046	0.79	+0.1
2,142,839	-		MPMX19_02046	0.79	+0.7
2,142,839	-		MPMX19_02046	0.79	-0.9
2,142,839	-		MPMX19_02046	0.79	-1.7
2,142,839	-		MPMX19_02046	0.79	+0.7
2,142,839	-		MPMX19_02046	0.79	-0.0
2,142,839	-		MPMX19_02046	0.79	-0.5
2,142,839	-		MPMX19_02046	0.79	+0.2
2,142,839	-		MPMX19_02046	0.79	+1.2
2,142,839	-		MPMX19_02046	0.79	-0.4
2,142,839	-		MPMX19_02046	0.79	+0.2
2,142,839	-		MPMX19_02046	0.79	+1.5
2,142,839	-		MPMX19_02046	0.79	-0.1
2,143,027	+		MPMX19_02046	0.85	-0.5
2,143,027	+		MPMX19_02046	0.85	-0.7
2,143,028	-		MPMX19_02046	0.85	-0.4
2,143,217	-				+1.1
2,143,217	-				-0.9
2,143,249	+				-1.3
2,143,249	+				-1.5
2,143,249	+				-0.2
2,143,249	+				+0.3
2,143,249	+				-0.1
2,143,249	+				-1.2
2,143,249	+				+0.1
2,143,249	+				-0.7
2,143,249	+				-1.7
2,143,249	+				-1.4
2,143,249	+				-0.2
2,143,249	+				+0.9
2,143,249	+				-0.2
2,143,249	+				-1.1
2,143,249	+				-1.0
2,143,249	+				-0.6
2,143,250	-				+0.3
2,143,250	-				-2.2
2,143,250	-				-0.2
2,143,250	-				-0.9
2,143,250	-				-1.7
2,143,250	-				-1.2
2,143,250	-				+0.5
2,143,426	+				+0.3
2,143,426	+				-1.4
2,143,426	+				+0.5
2,143,426	+				-0.4
2,143,426	+				-1.1
2,143,426	+				+0.6
2,143,426	+				-0.5
2,143,427	-				-0.6
2,143,427	-				-0.7
2,143,427	-				-0.8
2,143,427	-				-0.9
2,143,427	-				-0.5
2,143,427	-				-0.1
2,143,427	-				-1.7
2,143,427	-				-2.2
2,143,427	-				-0.7
2,143,427	-				+1.1
2,143,501	+				-0.2
2,143,502	-				+0.1
2,143,502	-				-0.2
2,143,502	-				-0.8
2,143,580	+				-1.8
2,143,580	+				-0.5
2,143,580	+				-1.7
2,143,580	+				-0.4
2,143,580	+				-1.4
2,143,580	+				-0.7
2,143,580	+				-1.2
2,143,580	+				-0.2
2,143,581	-				+1.0
2,143,581	-				-0.3
2,143,581	-				-1.5
2,143,581	-				-2.4
2,143,581	-				+0.9
2,143,581	-				-1.0
2,143,581	-				-0.9
2,143,581	-				+0.8
2,143,581	-				-0.7
2,143,581	-				-0.7
2,143,586	+				-1.2
2,143,587	-				-2.5
2,143,598	-				-0.3
2,143,602	+				+0.1
2,143,651	+				-0.4
2,143,651	+				-0.7
2,143,687	+				-0.8
2,143,687	+				-0.8
2,143,687	+				+0.4
2,143,688	-				+0.4
2,143,688	-				-0.6
2,143,706	+				-0.7
2,143,707	-				+1.5
2,143,738	+				-1.2
2,143,738	+				+0.7
2,143,738	+				+0.2
2,143,738	+				-0.7
2,143,738	+				+0.1
2,143,738	+				-1.4
2,143,738	+				-0.5
2,143,739	-				+0.2
2,144,319	+		MPMX19_02047	0.43	+0.6
2,144,319	+		MPMX19_02047	0.43	+1.0
2,144,319	+		MPMX19_02047	0.43	-1.9
2,144,319	+		MPMX19_02047	0.43	-0.7
2,144,319	+		MPMX19_02047	0.43	-0.5
2,144,320	-		MPMX19_02047	0.43	-0.1
2,144,320	-		MPMX19_02047	0.43	-0.1
2,144,320	-		MPMX19_02047	0.43	-1.3
2,144,335	+		MPMX19_02047	0.45	+0.2
2,144,335	+		MPMX19_02047	0.45	-1.2
2,144,335	+		MPMX19_02047	0.45	+0.1
2,144,335	+		MPMX19_02047	0.45	-1.0
2,144,335	+		MPMX19_02047	0.45	-0.2
2,144,336	-		MPMX19_02047	0.45	-0.7
2,144,336	-		MPMX19_02047	0.45	-0.4
2,144,336	-		MPMX19_02047	0.45	+0.1
2,144,433	+		MPMX19_02047	0.54	-0.4
2,144,433	+		MPMX19_02047	0.54	-1.6
2,144,433	+		MPMX19_02047	0.54	-1.1
2,144,433	+		MPMX19_02047	0.54	-0.8
2,144,493	+		MPMX19_02047	0.60	-1.1
2,144,493	+		MPMX19_02047	0.60	-1.1
2,144,493	+		MPMX19_02047	0.60	-0.0
2,144,493	+		MPMX19_02047	0.60	-2.1
2,144,493	+		MPMX19_02047	0.60	-0.1
2,144,493	+		MPMX19_02047	0.60	-0.8
2,144,493	+		MPMX19_02047	0.60	-0.2
2,144,494	-		MPMX19_02047	0.60	-1.4
2,144,494	-		MPMX19_02047	0.60	-1.1
2,144,494	-		MPMX19_02047	0.60	-0.7
2,144,494	-		MPMX19_02047	0.60	+0.2
2,144,494	-		MPMX19_02047	0.60	+0.6
2,144,494	-		MPMX19_02047	0.60	-0.8
2,144,494	-		MPMX19_02047	0.60	-1.5
2,144,494	-		MPMX19_02047	0.60	-0.4