Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02004

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,092,156	+				-0.1
2,092,157	-				+0.7
2,092,157	-				-0.7
2,092,157	-				+0.8
2,092,157	-				+0.3
2,092,357	+		MPMX19_02003	0.21	-0.5
2,092,357	+		MPMX19_02003	0.21	+0.4
2,092,357	+		MPMX19_02003	0.21	-1.6
2,092,357	+		MPMX19_02003	0.21	-0.4
2,092,357	+		MPMX19_02003	0.21	+0.9
2,092,357	+		MPMX19_02003	0.21	-0.2
2,092,357	+		MPMX19_02003	0.21	-0.5
2,092,357	+		MPMX19_02003	0.21	+0.8
2,092,357	+		MPMX19_02003	0.21	-0.2
2,092,357	+		MPMX19_02003	0.21	+0.8
2,092,357	+		MPMX19_02003	0.21	-0.1
2,092,357	+		MPMX19_02003	0.21	-0.1
2,092,357	+		MPMX19_02003	0.21	+0.1
2,092,357	+		MPMX19_02003	0.21	-1.8
2,092,358	-		MPMX19_02003	0.21	-1.2
2,092,358	-		MPMX19_02003	0.21	-0.2
2,092,358	-		MPMX19_02003	0.21	+0.9
2,092,358	-		MPMX19_02003	0.21	-1.2
2,092,358	-		MPMX19_02003	0.21	-0.1
2,092,358	-		MPMX19_02003	0.21	-1.7
2,092,358	-		MPMX19_02003	0.21	-0.4
2,092,358	-		MPMX19_02003	0.21	-1.4
2,092,358	-		MPMX19_02003	0.21	-0.4
2,092,358	-		MPMX19_02003	0.21	-2.2
2,092,675	+		MPMX19_02003	0.57	+0.4
2,092,676	-		MPMX19_02003	0.57	+1.5
2,092,684	+		MPMX19_02003	0.58	-0.0
2,092,684	+		MPMX19_02003	0.58	-1.4
2,092,684	+		MPMX19_02003	0.58	-0.9
2,092,685	-		MPMX19_02003	0.58	-1.4
2,092,685	-		MPMX19_02003	0.58	-0.5
2,092,720	+		MPMX19_02003	0.62	-0.8
2,092,720	+		MPMX19_02003	0.62	+0.4
2,092,720	+		MPMX19_02003	0.62	+0.1
2,092,720	+		MPMX19_02003	0.62	-0.2
2,092,720	+		MPMX19_02003	0.62	-0.2
2,092,720	+		MPMX19_02003	0.62	+0.5
2,092,720	+		MPMX19_02003	0.62	+1.1
2,092,720	+		MPMX19_02003	0.62	+0.3
2,092,720	+		MPMX19_02003	0.62	-1.2
2,092,720	+		MPMX19_02003	0.62	-1.9
2,092,721	-		MPMX19_02003	0.62	+0.5
2,092,721	-		MPMX19_02003	0.62	+0.2
2,092,721	-		MPMX19_02003	0.62	-1.8
2,092,721	-		MPMX19_02003	0.62	-0.2
2,093,316	+		MPMX19_02004	0.21	-0.3
2,093,316	+		MPMX19_02004	0.21	-0.4
2,093,316	+		MPMX19_02004	0.21	-0.7
2,093,316	+		MPMX19_02004	0.21	+0.3
2,093,317	-		MPMX19_02004	0.21	+0.1
2,093,317	-		MPMX19_02004	0.21	+3.1
2,093,319	+		MPMX19_02004	0.21	-0.6
2,093,320	-		MPMX19_02004	0.22	-0.2
2,093,320	-		MPMX19_02004	0.22	-0.3
2,093,508	+		MPMX19_02004	0.41	-1.2
2,093,508	+		MPMX19_02004	0.41	-1.4
2,093,509	-		MPMX19_02004	0.41	-0.1
2,093,509	-		MPMX19_02004	0.41	-0.9
2,093,509	-		MPMX19_02004	0.41	-0.4
2,093,509	-		MPMX19_02004	0.41	-1.4
2,093,509	-		MPMX19_02004	0.41	-0.2
2,093,509	-		MPMX19_02004	0.41	-0.5
2,093,509	-		MPMX19_02004	0.41	-0.1
2,093,544	-		MPMX19_02004	0.45	-1.6
2,093,598	+		MPMX19_02004	0.50	-1.4
2,093,598	+		MPMX19_02004	0.50	-0.7
2,093,599	-		MPMX19_02004	0.50	+1.1
2,093,716	-		MPMX19_02004	0.63	-0.4
2,093,716	-		MPMX19_02004	0.63	-1.3
2,093,716	-		MPMX19_02004	0.63	-1.2
2,093,724	+		MPMX19_02004	0.63	-0.7
2,093,724	+		MPMX19_02004	0.63	-0.8
2,093,724	+		MPMX19_02004	0.63	+0.2
2,093,724	+		MPMX19_02004	0.63	-0.5
2,093,724	+		MPMX19_02004	0.63	+0.7
2,093,724	+		MPMX19_02004	0.63	-0.5
2,093,724	+		MPMX19_02004	0.63	+0.2
2,093,724	+		MPMX19_02004	0.63	-0.7
2,093,724	+		MPMX19_02004	0.63	-0.5
2,093,724	+		MPMX19_02004	0.63	-0.0
2,093,725	-		MPMX19_02004	0.63	+0.2
2,093,725	-		MPMX19_02004	0.63	-1.3
2,093,725	-		MPMX19_02004	0.63	-1.9
2,093,725	-		MPMX19_02004	0.63	-0.7
2,093,725	-		MPMX19_02004	0.63	+0.2
2,093,725	-		MPMX19_02004	0.63	-0.3
2,093,725	-		MPMX19_02004	0.63	-0.8
2,093,725	-		MPMX19_02004	0.63	-0.5
2,093,883	+		MPMX19_02004	0.80	-0.9
2,093,883	+		MPMX19_02004	0.80	-2.2
2,093,883	+		MPMX19_02004	0.80	-1.1
2,093,883	+		MPMX19_02004	0.80	-0.3
2,093,883	+		MPMX19_02004	0.80	-0.7
2,093,883	+		MPMX19_02004	0.80	-1.1
2,093,884	-		MPMX19_02004	0.80	-0.7
2,093,884	-		MPMX19_02004	0.80	-0.2
2,093,884	-		MPMX19_02004	0.80	+0.4
2,093,884	-		MPMX19_02004	0.80	-2.4
2,093,884	-		MPMX19_02004	0.80	-0.9
2,093,884	-		MPMX19_02004	0.80	-1.4
2,093,884	-		MPMX19_02004	0.80	-1.8
2,093,884	-		MPMX19_02004	0.80	-0.9
2,093,884	-		MPMX19_02004	0.80	+0.5
2,093,884	-		MPMX19_02004	0.80	-1.2
2,093,884	-		MPMX19_02004	0.80	+0.1
2,093,884	-		MPMX19_02004	0.80	-1.0
2,094,088	+				-1.4
2,094,089	-				-2.2
2,094,107	-				-0.7
2,094,490	+		MPMX19_02005	0.55	-0.7
2,094,491	-		MPMX19_02005	0.55	+0.8