Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01996

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,082,094	+		MPMX19_01994	0.71	-0.4
2,082,094	+		MPMX19_01994	0.71	-0.7
2,082,094	+		MPMX19_01994	0.71	+0.8
2,082,094	+		MPMX19_01994	0.71	-1.7
2,082,094	+		MPMX19_01994	0.71	-2.3
2,082,094	+		MPMX19_01994	0.71	-0.1
2,082,094	+		MPMX19_01994	0.71	-1.5
2,082,094	+		MPMX19_01994	0.71	+0.1
2,082,094	+		MPMX19_01994	0.71	-0.7
2,082,094	+		MPMX19_01994	0.71	-0.4
2,082,094	+		MPMX19_01994	0.71	+0.3
2,082,094	+		MPMX19_01994	0.71	-0.7
2,082,094	+		MPMX19_01994	0.71	-3.1
2,082,094	+		MPMX19_01994	0.71	-1.2
2,082,095	-		MPMX19_01994	0.71	-1.3
2,082,095	-		MPMX19_01994	0.71	-1.4
2,082,095	-		MPMX19_01994	0.71	-1.5
2,082,095	-		MPMX19_01994	0.71	-0.2
2,082,095	-		MPMX19_01994	0.71	-0.6
2,082,095	-		MPMX19_01994	0.71	-0.2
2,082,095	-		MPMX19_01994	0.71	-0.0
2,082,095	-		MPMX19_01994	0.71	-0.7
2,082,095	-		MPMX19_01994	0.71	-1.3
2,082,151	+		MPMX19_01994	0.82	-1.1
2,082,151	+		MPMX19_01994	0.82	-0.6
2,082,151	+		MPMX19_01994	0.82	-0.7
2,082,151	+		MPMX19_01994	0.82	-1.1
2,082,151	+		MPMX19_01994	0.82	-0.4
2,082,151	+		MPMX19_01994	0.82	+0.3
2,082,152	-		MPMX19_01994	0.83	+0.5
2,082,152	-		MPMX19_01994	0.83	+0.7
2,082,199	+				-0.0
2,082,199	+				-0.0
2,082,199	+				-0.4
2,082,199	+				-1.4
2,082,199	+				-0.0
2,082,199	+				+0.1
2,082,199	+				+0.3
2,082,199	+				-2.2
2,082,199	+				-1.5
2,082,199	+				-0.2
2,082,199	+				-0.2
2,082,199	+				-0.2
2,082,199	+				-0.9
2,082,199	+				-0.2
2,082,199	+				-1.1
2,082,199	+				+2.1
2,082,199	+				-0.1
2,082,199	+				-0.2
2,082,199	+				+0.1
2,082,199	+				-0.3
2,082,199	+				+0.5
2,082,199	+				-1.4
2,082,200	-				+0.1
2,082,200	-				+0.2
2,082,200	-				-1.0
2,082,200	-				+0.1
2,082,200	-				+0.5
2,082,200	-				-0.9
2,082,200	-				+0.1
2,082,200	-				+1.1
2,082,200	-				+1.2
2,082,200	-				-0.5
2,082,200	-				+1.4
2,082,200	-				-0.5
2,082,200	-				+0.1
2,082,200	-				-0.7
2,082,200	-				-0.2
2,082,200	-				+2.1
2,082,200	-				-0.5
2,082,200	-				-0.6
2,082,391	+		MPMX19_01995	0.16	+0.5
2,082,391	+		MPMX19_01995	0.16	-0.3
2,082,391	+		MPMX19_01995	0.16	-0.5
2,082,391	+		MPMX19_01995	0.16	-0.9
2,082,392	-		MPMX19_01995	0.17	+0.2
2,082,392	-		MPMX19_01995	0.17	-0.4
2,082,392	-		MPMX19_01995	0.17	-1.2
2,082,392	-		MPMX19_01995	0.17	-0.4
2,082,832	+		MPMX19_01995	0.85	-2.3
2,082,832	+		MPMX19_01995	0.85	-0.3
2,082,832	+		MPMX19_01995	0.85	-1.6
2,082,833	-		MPMX19_01995	0.85	-1.1
2,082,833	-		MPMX19_01995	0.85	+0.7
2,082,833	-		MPMX19_01995	0.85	-1.3
2,082,833	-		MPMX19_01995	0.85	-0.6
2,082,833	-		MPMX19_01995	0.85	-1.5
2,082,833	-		MPMX19_01995	0.85	-0.2
2,082,975	+				-0.6
2,082,975	+				+0.7
2,082,975	+				-1.4
2,082,975	+				+0.2
2,082,975	+				-1.1
2,082,975	+				+0.9
2,082,975	+				-1.5
2,082,975	+				-0.7
2,082,976	-				-1.1
2,082,976	-				-1.1
2,082,976	-				+0.5
2,082,976	-				+0.6
2,082,976	-				-1.9
2,082,976	-				-0.8
2,082,976	-				-0.1
2,082,976	-				-2.4
2,082,976	-				-0.0
2,082,976	-				-1.2
2,082,976	-				+1.1
2,082,976	-				+0.8
2,082,976	-				+0.4
2,082,976	-				-2.6
2,082,976	-				-0.3
2,083,032	+				-0.1
2,083,032	+				-0.4
2,083,033	-				-0.0
2,083,033	-				+0.5
2,084,037	+				-1.2
2,084,037	+				-2.5
2,084,037	+				-1.8
2,084,038	-				-1.1
2,084,038	-				+0.3
2,084,038	-				-0.2
2,084,092	+				-0.5
2,084,092	+				+0.4
2,084,092	+				-1.6
2,084,099	+				-1.0
2,084,099	+				-0.8
2,084,099	+				-1.1
2,084,473	-		MPMX19_01997	0.23	-0.4
2,084,997	+		MPMX19_01997	0.60	+0.1