Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01928

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,010,428	+		MPMX19_01926	0.77	-1.3
2,010,428	+		MPMX19_01926	0.77	-0.6
2,010,429	-		MPMX19_01926	0.77	-0.1
2,010,429	-		MPMX19_01926	0.77	-0.5
2,010,429	-		MPMX19_01926	0.77	-0.6
2,010,523	-				-2.3
2,010,644	+				+0.4
2,010,644	+				-1.7
2,010,644	+				-0.4
2,010,645	-				+0.1
2,010,645	-				+0.4
2,010,645	-				+0.5
2,010,645	-				-1.2
2,010,779	+		MPMX19_01927	0.23	-1.1
2,010,779	+		MPMX19_01927	0.23	-0.9
2,010,779	+		MPMX19_01927	0.23	+0.1
2,010,779	+		MPMX19_01927	0.23	-1.5
2,010,779	+		MPMX19_01927	0.23	+0.1
2,010,779	+		MPMX19_01927	0.23	-1.4
2,010,779	+		MPMX19_01927	0.23	-2.3
2,010,779	+		MPMX19_01927	0.23	+0.1
2,010,779	+		MPMX19_01927	0.23	-0.8
2,010,779	+		MPMX19_01927	0.23	-1.7
2,010,779	+		MPMX19_01927	0.23	-1.8
2,010,779	+		MPMX19_01927	0.23	+0.2
2,010,779	+		MPMX19_01927	0.23	+0.5
2,010,779	+		MPMX19_01927	0.23	+0.9
2,010,779	+		MPMX19_01927	0.23	-0.2
2,010,779	+		MPMX19_01927	0.23	-1.1
2,010,779	+		MPMX19_01927	0.23	-0.8
2,010,779	+		MPMX19_01927	0.23	+0.7
2,010,779	+		MPMX19_01927	0.23	+1.7
2,010,780	-		MPMX19_01927	0.23	-0.2
2,010,780	-		MPMX19_01927	0.23	-0.1
2,010,780	-		MPMX19_01927	0.23	-0.4
2,010,780	-		MPMX19_01927	0.23	-0.4
2,010,780	-		MPMX19_01927	0.23	-0.4
2,010,780	-		MPMX19_01927	0.23	-0.2
2,010,780	-		MPMX19_01927	0.23	+0.9
2,010,780	-		MPMX19_01927	0.23	+0.8
2,010,780	-		MPMX19_01927	0.23	+0.8
2,010,780	-		MPMX19_01927	0.23	-1.6
2,010,780	-		MPMX19_01927	0.23	+1.0
2,010,780	-		MPMX19_01927	0.23	-0.5
2,010,780	-		MPMX19_01927	0.23	+0.0
2,010,780	-		MPMX19_01927	0.23	-0.8
2,010,780	-		MPMX19_01927	0.23	-1.1
2,010,780	-		MPMX19_01927	0.23	+0.0
2,010,780	-		MPMX19_01927	0.23	-0.2
2,010,780	-		MPMX19_01927	0.23	-1.6
2,010,780	-		MPMX19_01927	0.23	+0.4
2,010,780	-		MPMX19_01927	0.23	-2.1
2,011,227	-				-0.9
2,011,471	+		MPMX19_01928	0.15	-1.2
2,011,471	+		MPMX19_01928	0.15	+1.4
2,011,471	+		MPMX19_01928	0.15	-3.3
2,011,471	+		MPMX19_01928	0.15	-0.9
2,011,472	-		MPMX19_01928	0.15	+0.8
2,011,472	-		MPMX19_01928	0.15	-0.6
2,011,472	-		MPMX19_01928	0.15	-0.4
2,011,472	-		MPMX19_01928	0.15	-1.2
2,011,620	+		MPMX19_01928	0.37	-0.4
2,011,895	+		MPMX19_01928	0.79	-0.2
2,011,895	+		MPMX19_01928	0.79	-0.1
2,011,895	+		MPMX19_01928	0.79	-1.1
2,011,895	+		MPMX19_01928	0.79	-1.7
2,011,895	+		MPMX19_01928	0.79	-1.7
2,011,895	+		MPMX19_01928	0.79	-2.6
2,011,895	+		MPMX19_01928	0.79	-0.8
2,011,896	-		MPMX19_01928	0.79	+0.8
2,011,896	-		MPMX19_01928	0.79	-0.7
2,011,896	-		MPMX19_01928	0.79	-1.4
2,011,896	-		MPMX19_01928	0.79	+0.5
2,011,896	-		MPMX19_01928	0.79	-1.5
2,011,993	+				+0.2
2,011,993	+				-0.5
2,011,993	+				-0.5
2,011,993	+				-0.2
2,011,993	+				-0.4
2,011,993	+				+0.3
2,011,993	+				-0.1
2,011,993	+				-0.4
2,011,993	+				+0.1
2,011,993	+				-0.1
2,011,993	+				-1.0
2,011,993	+				-0.1
2,011,993	+				+0.5
2,011,993	+				+0.5
2,011,993	+				-1.8
2,011,993	+				-0.7
2,011,993	+				+0.2
2,011,993	+				-0.2
2,011,993	+				-0.2
2,011,993	+				-0.9
2,011,993	+				-1.4
2,011,993	+				+0.7
2,011,993	+				-0.4
2,011,994	-				+0.1
2,011,994	-				+0.3
2,011,994	-				-0.2
2,011,994	-				-1.4
2,011,994	-				-1.5
2,011,994	-				-1.2
2,011,994	-				-0.0
2,011,994	-				-0.8
2,011,994	-				-1.2
2,011,994	-				-0.7
2,011,994	-				-0.8
2,011,994	-				-0.8
2,011,994	-				-2.1
2,011,994	-				-1.2
2,011,994	-				-0.1
2,011,994	-				+0.1
2,011,994	-				-0.9
2,011,994	-				-2.1
2,011,994	-				-0.5
2,011,994	-				-0.5
2,011,994	-				-1.1
2,011,994	-				+0.2
2,011,994	-				-0.7
2,011,994	-				-0.5
2,012,271	-				+0.1
2,012,271	-				-0.5
2,012,271	-				-0.0