Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01865

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,944,764	+		MPMX19_01863	0.72	-0.2
1,944,764	+		MPMX19_01863	0.72	-0.2
1,944,764	+		MPMX19_01863	0.72	+0.3
1,944,765	-		MPMX19_01863	0.72	+0.3
1,944,765	-		MPMX19_01863	0.72	+0.3
1,944,765	-		MPMX19_01863	0.72	+0.1
1,944,765	-		MPMX19_01863	0.72	-0.5
1,944,765	-		MPMX19_01863	0.72	+0.2
1,944,878	-		MPMX19_01863	0.79	-1.2
1,944,899	+		MPMX19_01863	0.80	-0.9
1,944,899	+		MPMX19_01863	0.80	+0.1
1,944,899	+		MPMX19_01863	0.80	-0.1
1,944,900	-		MPMX19_01863	0.80	-0.7
1,944,900	-		MPMX19_01863	0.80	-0.2
1,944,900	-		MPMX19_01863	0.80	-1.6
1,945,072	+				-0.2
1,945,093	-				+0.3
1,945,109	+				+0.5
1,945,109	+				-1.1
1,945,109	+				-1.2
1,945,109	+				+0.7
1,945,109	+				-1.4
1,945,109	+				+0.1
1,945,109	+				-0.1
1,945,109	+				-1.8
1,945,110	-				+0.1
1,945,110	-				-1.1
1,945,110	-				+0.3
1,945,110	-				-1.7
1,945,110	-				-0.7
1,945,110	-				+0.3
1,945,110	-				-3.0
1,945,110	-				-1.6
1,945,110	-				+1.1
1,945,110	-				+0.1
1,945,110	-				+0.1
1,945,110	-				+0.5
1,945,122	+				-1.4
1,945,122	+				-0.4
1,945,122	+				+0.1
1,945,122	+				-0.9
1,945,122	+				+0.2
1,945,122	+				-0.8
1,945,122	+				-1.8
1,945,122	+				-1.7
1,945,122	+				-0.2
1,945,122	+				-2.8
1,945,123	-				+0.2
1,945,123	-				-0.7
1,945,123	-				-2.6
1,945,123	-				-0.2
1,945,149	+				-0.5
1,945,149	+				-0.7
1,945,149	+				-0.0
1,945,149	+				-0.8
1,945,149	+				+0.4
1,945,150	-				-1.7
1,945,150	-				-0.9
1,945,181	-				+0.5
1,945,181	-				-0.7
1,945,422	+		MPMX19_01864	0.47	-0.6
1,945,423	-		MPMX19_01864	0.47	-1.6
1,945,423	-		MPMX19_01864	0.47	-1.4
1,945,505	-		MPMX19_01864	0.68	-0.9
1,945,631	-				-0.5
1,945,631	-				-2.0
1,945,631	-				+0.1
1,945,688	+				-0.2
1,945,688	+				-1.0
1,945,688	+				-0.5
1,945,688	+				-0.4
1,945,688	+				+0.5
1,945,688	+				+0.4
1,945,688	+				+1.1
1,945,688	+				-0.0
1,945,689	-				-1.6
1,945,689	-				+0.4
1,945,689	-				-0.7
1,945,689	-				+0.1
1,945,823	+		MPMX19_01865	0.10	-0.1
1,945,823	+		MPMX19_01865	0.10	-0.6
1,945,823	+		MPMX19_01865	0.10	+0.3
1,945,823	+		MPMX19_01865	0.10	-1.0
1,945,823	+		MPMX19_01865	0.10	+0.5
1,945,823	+		MPMX19_01865	0.10	-1.2
1,945,823	+		MPMX19_01865	0.10	-2.1
1,945,823	+		MPMX19_01865	0.10	-1.4
1,945,823	+		MPMX19_01865	0.10	-0.2
1,945,823	+		MPMX19_01865	0.10	-0.5
1,945,824	-		MPMX19_01865	0.10	+1.2
1,945,824	-		MPMX19_01865	0.10	-0.2
1,945,824	-		MPMX19_01865	0.10	-0.9
1,945,824	-		MPMX19_01865	0.10	+0.7
1,945,824	-		MPMX19_01865	0.10	-0.5
1,945,824	-		MPMX19_01865	0.10	-0.9
1,945,824	-		MPMX19_01865	0.10	+0.3
1,945,824	-		MPMX19_01865	0.10	+0.9
1,945,824	-		MPMX19_01865	0.10	-0.1
1,945,952	+		MPMX19_01865	0.21	-0.8
1,945,952	+		MPMX19_01865	0.21	+0.3
1,945,952	+		MPMX19_01865	0.21	-0.7
1,945,952	+		MPMX19_01865	0.21	-0.2
1,945,953	-		MPMX19_01865	0.21	-1.3
1,945,953	-		MPMX19_01865	0.21	-1.4
1,945,953	-		MPMX19_01865	0.21	-1.8
1,945,953	-		MPMX19_01865	0.21	+0.9
1,945,953	-		MPMX19_01865	0.21	-0.6
1,945,953	-		MPMX19_01865	0.21	+0.1
1,945,953	-		MPMX19_01865	0.21	-2.2
1,945,953	-		MPMX19_01865	0.21	-0.5
1,945,956	-		MPMX19_01865	0.22	+0.2
1,945,988	+		MPMX19_01865	0.24	-0.2
1,946,060	+		MPMX19_01865	0.31	-0.1
1,946,060	+		MPMX19_01865	0.31	+0.1
1,946,060	+		MPMX19_01865	0.31	-0.5
1,946,060	+		MPMX19_01865	0.31	-0.1
1,946,060	+		MPMX19_01865	0.31	-1.1
1,946,060	+		MPMX19_01865	0.31	-0.0
1,946,060	+		MPMX19_01865	0.31	+0.1
1,946,061	-		MPMX19_01865	0.31	+1.1
1,946,061	-		MPMX19_01865	0.31	-1.2
1,946,061	-		MPMX19_01865	0.31	-1.1
1,946,105	+		MPMX19_01865	0.35	-1.1
1,946,105	+		MPMX19_01865	0.35	-0.8
1,946,105	+		MPMX19_01865	0.35	-0.8
1,946,106	-		MPMX19_01865	0.35	-1.0
1,946,106	-		MPMX19_01865	0.35	+0.4
1,946,106	-		MPMX19_01865	0.35	+0.5
1,946,106	-		MPMX19_01865	0.35	-2.9
1,946,106	-		MPMX19_01865	0.35	-0.9
1,946,366	+		MPMX19_01865	0.57	-2.7
1,946,366	+		MPMX19_01865	0.57	+0.8
1,946,366	+		MPMX19_01865	0.57	+1.1
1,946,366	+		MPMX19_01865	0.57	+1.4
1,946,366	+		MPMX19_01865	0.57	-0.7
1,946,366	+		MPMX19_01865	0.57	-0.9
1,946,366	+		MPMX19_01865	0.57	-1.5
1,946,366	+		MPMX19_01865	0.57	-1.0
1,946,366	+		MPMX19_01865	0.57	-0.1
1,946,367	-		MPMX19_01865	0.57	-0.9
1,946,367	-		MPMX19_01865	0.57	+0.1
1,946,367	-		MPMX19_01865	0.57	-0.2
1,946,367	-		MPMX19_01865	0.57	-0.6
1,946,367	-		MPMX19_01865	0.57	-1.2
1,946,367	-		MPMX19_01865	0.57	-0.8
1,946,367	-		MPMX19_01865	0.57	-0.9
1,946,367	-		MPMX19_01865	0.57	-1.6
1,946,478	-		MPMX19_01865	0.67	+0.1
1,946,644	+		MPMX19_01865	0.81	-0.1
1,946,644	+		MPMX19_01865	0.81	-0.9
1,946,644	+		MPMX19_01865	0.81	+0.9
1,946,645	-		MPMX19_01865	0.81	+0.3
1,946,645	-		MPMX19_01865	0.81	-1.0
1,946,645	-		MPMX19_01865	0.81	+0.0
1,946,645	-		MPMX19_01865	0.81	-2.4
1,946,689	+		MPMX19_01865	0.85	-1.4
1,946,689	+		MPMX19_01865	0.85	-1.7
1,946,689	+		MPMX19_01865	0.85	-0.3
1,946,689	+		MPMX19_01865	0.85	+0.3
1,946,689	+		MPMX19_01865	0.85	-0.5
1,946,689	+		MPMX19_01865	0.85	-0.2
1,946,689	+		MPMX19_01865	0.85	-1.7
1,946,689	+		MPMX19_01865	0.85	-0.4
1,946,689	+		MPMX19_01865	0.85	-1.4
1,946,690	-		MPMX19_01865	0.85	+0.2
1,946,690	-		MPMX19_01865	0.85	+0.1
1,946,690	-		MPMX19_01865	0.85	-0.3
1,946,690	-		MPMX19_01865	0.85	-0.2
1,946,690	-		MPMX19_01865	0.85	+0.1
1,946,690	-		MPMX19_01865	0.85	+0.8
1,946,690	-		MPMX19_01865	0.85	+0.5
1,946,690	-		MPMX19_01865	0.85	-0.4
1,946,690	-		MPMX19_01865	0.85	+0.0
1,946,973	+		MPMX19_01866	0.34	-0.9
1,946,973	+		MPMX19_01866	0.34	-0.0
1,946,973	+		MPMX19_01866	0.34	+0.6
1,946,973	+		MPMX19_01866	0.34	-1.7
1,946,973	+		MPMX19_01866	0.34	+0.1
1,946,973	+		MPMX19_01866	0.34	-0.5
1,946,974	-		MPMX19_01866	0.34	+0.6
1,946,974	-		MPMX19_01866	0.34	-0.2
1,946,974	-		MPMX19_01866	0.34	-0.2
1,946,974	-		MPMX19_01866	0.34	+0.0
1,946,974	-		MPMX19_01866	0.34	-1.1
1,946,974	-		MPMX19_01866	0.34	-0.6
1,946,974	-		MPMX19_01866	0.34	-0.4
1,947,320	+		MPMX19_01867	0.11	+0.8
1,947,320	+		MPMX19_01867	0.11	-1.1
1,947,320	+		MPMX19_01867	0.11	-0.5
1,947,320	+		MPMX19_01867	0.11	-0.2
1,947,320	+		MPMX19_01867	0.11	+2.1
1,947,320	+		MPMX19_01867	0.11	-0.2
1,947,320	+		MPMX19_01867	0.11	+1.5
1,947,320	+		MPMX19_01867	0.11	-1.5
1,947,320	+		MPMX19_01867	0.11	-1.5
1,947,320	+		MPMX19_01867	0.11	+0.5
1,947,320	+		MPMX19_01867	0.11	+0.5
1,947,321	-		MPMX19_01867	0.12	-0.8
1,947,321	-		MPMX19_01867	0.12	+1.4
1,947,321	-		MPMX19_01867	0.12	-0.5
1,947,321	-		MPMX19_01867	0.12	+1.4
1,947,321	-		MPMX19_01867	0.12	+1.1
1,947,321	-		MPMX19_01867	0.12	-1.2
1,947,326	+		MPMX19_01867	0.12	-1.2
1,947,326	+		MPMX19_01867	0.12	-1.1
1,947,326	+		MPMX19_01867	0.12	-0.7
1,947,326	+		MPMX19_01867	0.12	-2.7
1,947,326	+		MPMX19_01867	0.12	+0.2
1,947,327	-		MPMX19_01867	0.12	-1.2
1,947,327	-		MPMX19_01867	0.12	-0.2
1,947,327	-		MPMX19_01867	0.12	+0.5
1,947,327	-		MPMX19_01867	0.12	+0.5
1,947,327	-		MPMX19_01867	0.12	+1.2
1,947,327	-		MPMX19_01867	0.12	+0.3
1,947,327	-		MPMX19_01867	0.12	-0.6
1,947,485	+		MPMX19_01867	0.23	-1.1
1,947,485	+		MPMX19_01867	0.23	-0.2
1,947,485	+		MPMX19_01867	0.23	-0.7
1,947,486	-		MPMX19_01867	0.23	-0.5
1,947,486	-		MPMX19_01867	0.23	-0.1
1,947,486	-		MPMX19_01867	0.23	+0.9
1,947,486	-		MPMX19_01867	0.23	-1.5