Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01836

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,916,090	+		MPMX19_01834	0.76	-0.5
1,916,090	+		MPMX19_01834	0.76	-0.9
1,916,091	-		MPMX19_01834	0.76	-0.3
1,916,250	+				-0.5
1,916,250	+				-0.0
1,916,251	-				+0.1
1,916,251	-				+0.3
1,916,251	-				-0.1
1,916,251	-				+0.3
1,916,251	-				+1.1
1,916,251	-				-0.3
1,916,251	-				-0.9
1,916,251	-				-1.3
1,916,387	-		MPMX19_01835	0.21	-0.1
1,916,652	+				-0.6
1,916,652	+				-0.5
1,916,652	+				-0.5
1,916,652	+				-1.1
1,916,652	+				-0.4
1,916,652	+				-1.5
1,916,652	+				-0.5
1,916,652	+				+1.1
1,916,652	+				-1.1
1,916,652	+				-0.4
1,916,652	+				-1.3
1,916,652	+				-1.0
1,916,652	+				+0.4
1,916,652	+				-1.4
1,916,652	+				-0.4
1,916,652	+				-0.8
1,916,652	+				+0.5
1,916,652	+				+0.5
1,916,652	+				-0.5
1,916,652	+				-0.5
1,916,652	+				-0.9
1,916,653	-				-2.4
1,916,653	-				+0.6
1,916,653	-				-1.1
1,916,653	-				-0.1
1,916,653	-				-2.7
1,916,653	-				-0.3
1,916,653	-				-0.5
1,916,653	-				-0.5
1,916,653	-				+1.4
1,916,653	-				-1.3
1,916,653	-				-0.4
1,916,653	-				-0.3
1,916,653	-				-0.8
1,916,653	-				-0.3
1,916,653	-				-1.3
1,916,653	-				-0.2
1,917,092	+		MPMX19_01836	0.34	-1.4
1,917,092	+		MPMX19_01836	0.34	+0.1
1,917,092	+		MPMX19_01836	0.34	-0.9
1,917,092	+		MPMX19_01836	0.34	-0.3
1,917,093	-		MPMX19_01836	0.34	-0.2
1,917,093	-		MPMX19_01836	0.34	-0.4
1,917,093	-		MPMX19_01836	0.34	-1.1
1,917,093	-		MPMX19_01836	0.34	-0.9
1,917,093	-		MPMX19_01836	0.34	-0.6
1,917,164	+		MPMX19_01836	0.54	-2.3
1,917,164	+		MPMX19_01836	0.54	-1.2
1,917,165	-		MPMX19_01836	0.54	+0.1
1,917,165	-		MPMX19_01836	0.54	-0.7
1,917,224	+		MPMX19_01836	0.70	-1.7
1,917,224	+		MPMX19_01836	0.70	-0.9
1,917,224	+		MPMX19_01836	0.70	-0.4
1,917,225	-		MPMX19_01836	0.70	-0.3
1,917,225	-		MPMX19_01836	0.70	+0.8
1,917,225	-		MPMX19_01836	0.70	+0.3
1,917,225	-		MPMX19_01836	0.70	-2.2
1,917,225	-		MPMX19_01836	0.70	-0.8
1,917,225	-		MPMX19_01836	0.70	+0.1
1,917,332	+				-1.4
1,917,332	+				-1.0
1,917,333	-				-0.8
1,917,640	+		MPMX19_01837	0.31	+0.3
1,917,640	+		MPMX19_01837	0.31	-0.7
1,917,640	+		MPMX19_01837	0.31	+2.1
1,917,649	+		MPMX19_01837	0.32	-0.1
1,917,649	+		MPMX19_01837	0.32	-1.9
1,917,649	+		MPMX19_01837	0.32	-0.0
1,917,649	+		MPMX19_01837	0.32	-0.5
1,917,649	+		MPMX19_01837	0.32	-2.4
1,917,649	+		MPMX19_01837	0.32	+0.2
1,917,649	+		MPMX19_01837	0.32	-0.1
1,917,649	+		MPMX19_01837	0.32	-1.6
1,917,649	+		MPMX19_01837	0.32	+0.3
1,917,649	+		MPMX19_01837	0.32	-0.6
1,917,649	+		MPMX19_01837	0.32	+0.8
1,917,649	+		MPMX19_01837	0.32	-0.5
1,917,650	-		MPMX19_01837	0.32	-1.1
1,917,650	-		MPMX19_01837	0.32	-1.1
1,917,650	-		MPMX19_01837	0.32	+0.6
1,917,650	-		MPMX19_01837	0.32	-0.6
1,917,650	-		MPMX19_01837	0.32	-1.4
1,917,650	-		MPMX19_01837	0.32	-1.6
1,917,650	-		MPMX19_01837	0.32	-1.5
1,917,650	-		MPMX19_01837	0.32	+0.3
1,917,650	-		MPMX19_01837	0.32	-0.5
1,917,650	-		MPMX19_01837	0.32	-0.7
1,917,650	-		MPMX19_01837	0.32	-0.2
1,917,650	-		MPMX19_01837	0.32	-0.1
1,917,650	-		MPMX19_01837	0.32	-1.6
1,917,650	-		MPMX19_01837	0.32	-0.5
1,917,650	-		MPMX19_01837	0.32	-0.7
1,917,685	+		MPMX19_01837	0.36	+0.5
1,917,685	+		MPMX19_01837	0.36	-0.2
1,917,685	+		MPMX19_01837	0.36	+0.1
1,917,685	+		MPMX19_01837	0.36	+0.3
1,917,685	+		MPMX19_01837	0.36	+0.3
1,917,685	+		MPMX19_01837	0.36	-0.0
1,917,685	+		MPMX19_01837	0.36	-1.2
1,917,685	+		MPMX19_01837	0.36	-0.0
1,917,685	+		MPMX19_01837	0.36	-0.5
1,917,685	+		MPMX19_01837	0.36	-0.5
1,917,685	+		MPMX19_01837	0.36	-0.6
1,917,685	+		MPMX19_01837	0.36	-1.5
1,917,685	+		MPMX19_01837	0.36	+2.1
1,917,685	+		MPMX19_01837	0.36	-1.2
1,917,685	+		MPMX19_01837	0.36	-0.0
1,917,685	+		MPMX19_01837	0.36	-0.6
1,917,685	+		MPMX19_01837	0.36	+0.8
1,917,685	+		MPMX19_01837	0.36	-1.7
1,917,685	+		MPMX19_01837	0.36	+1.3
1,917,685	+		MPMX19_01837	0.36	-0.9
1,917,685	+		MPMX19_01837	0.36	-1.5
1,917,685	+		MPMX19_01837	0.36	-0.7
1,917,685	+		MPMX19_01837	0.36	+0.8
1,917,685	+		MPMX19_01837	0.36	+0.3
1,917,685	+		MPMX19_01837	0.36	-0.9
1,917,686	-		MPMX19_01837	0.36	-0.6
1,917,686	-		MPMX19_01837	0.36	-0.3
1,917,686	-		MPMX19_01837	0.36	-1.2
1,917,686	-		MPMX19_01837	0.36	+0.5
1,917,686	-		MPMX19_01837	0.36	+1.4
1,917,686	-		MPMX19_01837	0.36	+0.1
1,917,686	-		MPMX19_01837	0.36	+0.6
1,917,686	-		MPMX19_01837	0.36	+0.5
1,917,686	-		MPMX19_01837	0.36	-1.1
1,917,686	-		MPMX19_01837	0.36	+1.7
1,917,686	-		MPMX19_01837	0.36	-2.4
1,917,686	-		MPMX19_01837	0.36	+0.1
1,917,686	-		MPMX19_01837	0.36	-0.5
1,917,686	-		MPMX19_01837	0.36	+0.1
1,917,686	-		MPMX19_01837	0.36	+0.3
1,917,686	-		MPMX19_01837	0.36	-0.9
1,917,686	-		MPMX19_01837	0.36	-0.9
1,917,686	-		MPMX19_01837	0.36	-0.8
1,917,686	-		MPMX19_01837	0.36	-2.0
1,917,686	-		MPMX19_01837	0.36	-0.2
1,917,686	-		MPMX19_01837	0.36	+0.1
1,917,686	-		MPMX19_01837	0.36	-2.0
1,917,946	+		MPMX19_01837	0.63	+1.3
1,917,946	+		MPMX19_01837	0.63	-0.7
1,917,946	+		MPMX19_01837	0.63	+0.9
1,917,946	+		MPMX19_01837	0.63	+0.9
1,917,946	+		MPMX19_01837	0.63	-0.6
1,917,946	+		MPMX19_01837	0.63	-0.1
1,917,946	+		MPMX19_01837	0.63	-2.2
1,917,946	+		MPMX19_01837	0.63	-1.0
1,917,946	+		MPMX19_01837	0.63	-1.1
1,917,946	+		MPMX19_01837	0.63	-0.7
1,917,946	+		MPMX19_01837	0.63	-0.1
1,917,946	+		MPMX19_01837	0.63	+0.4
1,917,946	+		MPMX19_01837	0.63	+1.5
1,917,946	+		MPMX19_01837	0.63	+0.1
1,917,946	+		MPMX19_01837	0.63	-1.2
1,917,946	+		MPMX19_01837	0.63	-1.8
1,917,946	+		MPMX19_01837	0.63	+1.0
1,917,946	+		MPMX19_01837	0.63	+0.6
1,917,946	+		MPMX19_01837	0.63	-1.1
1,917,946	+		MPMX19_01837	0.63	-1.4
1,917,946	+		MPMX19_01837	0.63	-0.4
1,917,946	+		MPMX19_01837	0.63	-0.6
1,917,946	+		MPMX19_01837	0.63	+1.4
1,917,946	+		MPMX19_01837	0.63	-1.4
1,917,946	+		MPMX19_01837	0.63	-0.2
1,917,946	+		MPMX19_01837	0.63	-0.7
1,917,946	+		MPMX19_01837	0.63	+1.3
1,917,946	+		MPMX19_01837	0.63	-1.5
1,917,946	+		MPMX19_01837	0.63	-1.6
1,917,946	+		MPMX19_01837	0.63	+1.1
1,917,946	+		MPMX19_01837	0.63	-0.7
1,917,946	+		MPMX19_01837	0.63	-0.7
1,917,946	+		MPMX19_01837	0.63	-1.4
1,917,947	-		MPMX19_01837	0.63	+1.1
1,917,947	-		MPMX19_01837	0.63	-0.7
1,917,947	-		MPMX19_01837	0.63	-2.2
1,917,947	-		MPMX19_01837	0.63	+0.5
1,917,947	-		MPMX19_01837	0.63	+0.2
1,917,947	-		MPMX19_01837	0.63	-0.6
1,917,947	-		MPMX19_01837	0.63	-0.6
1,917,947	-		MPMX19_01837	0.63	+0.3
1,917,947	-		MPMX19_01837	0.63	-1.7
1,917,947	-		MPMX19_01837	0.63	-0.9
1,917,947	-		MPMX19_01837	0.63	-0.4
1,917,947	-		MPMX19_01837	0.63	-0.2
1,917,947	-		MPMX19_01837	0.63	-1.1
1,917,947	-		MPMX19_01837	0.63	+0.2
1,917,947	-		MPMX19_01837	0.63	+0.2
1,917,947	-		MPMX19_01837	0.63	-1.0
1,917,947	-		MPMX19_01837	0.63	+1.8
1,917,947	-		MPMX19_01837	0.63	+0.8
1,917,947	-		MPMX19_01837	0.63	-0.6
1,917,947	-		MPMX19_01837	0.63	-0.2
1,917,947	-		MPMX19_01837	0.63	+0.1
1,917,947	-		MPMX19_01837	0.63	+0.5
1,917,947	-		MPMX19_01837	0.63	+1.2
1,917,947	-		MPMX19_01837	0.63	+1.1
1,917,947	-		MPMX19_01837	0.63	+2.1
1,917,947	-		MPMX19_01837	0.63	-1.1
1,917,947	-		MPMX19_01837	0.63	-0.0
1,917,947	-		MPMX19_01837	0.63	+0.2
1,917,947	-		MPMX19_01837	0.63	+0.5
1,917,947	-		MPMX19_01837	0.63	-0.3
1,918,018	+		MPMX19_01837	0.71	+0.5
1,918,018	+		MPMX19_01837	0.71	-1.6
1,918,018	+		MPMX19_01837	0.71	+2.1
1,918,018	+		MPMX19_01837	0.71	-0.2
1,918,018	+		MPMX19_01837	0.71	+0.5
1,918,018	+		MPMX19_01837	0.71	-1.2
1,918,018	+		MPMX19_01837	0.71	-0.6
1,918,018	+		MPMX19_01837	0.71	-1.9
1,918,018	+		MPMX19_01837	0.71	-2.0
1,918,018	+		MPMX19_01837	0.71	-0.0
1,918,018	+		MPMX19_01837	0.71	+1.8
1,918,018	+		MPMX19_01837	0.71	-0.1
1,918,018	+		MPMX19_01837	0.71	-0.4
1,918,018	+		MPMX19_01837	0.71	-1.1
1,918,018	+		MPMX19_01837	0.71	+0.3
1,918,018	+		MPMX19_01837	0.71	-0.5
1,918,018	+		MPMX19_01837	0.71	-0.5
1,918,018	+		MPMX19_01837	0.71	-2.4
1,918,018	+		MPMX19_01837	0.71	+0.1
1,918,019	-		MPMX19_01837	0.71	+0.7
1,918,019	-		MPMX19_01837	0.71	-0.4
1,918,019	-		MPMX19_01837	0.71	+0.7
1,918,019	-		MPMX19_01837	0.71	-0.6
1,918,019	-		MPMX19_01837	0.71	+0.6
1,918,019	-		MPMX19_01837	0.71	+0.5
1,918,019	-		MPMX19_01837	0.71	-0.2
1,918,019	-		MPMX19_01837	0.71	-0.9
1,918,019	-		MPMX19_01837	0.71	-0.2
1,918,019	-		MPMX19_01837	0.71	+0.3
1,918,019	-		MPMX19_01837	0.71	+0.8
1,918,019	-		MPMX19_01837	0.71	+1.3
1,918,019	-		MPMX19_01837	0.71	+0.9
1,918,019	-		MPMX19_01837	0.71	+2.3
1,918,019	-		MPMX19_01837	0.71	-0.5
1,918,019	-		MPMX19_01837	0.71	-0.4
1,918,162	+		MPMX19_01837	0.86	+0.5
1,918,162	+		MPMX19_01837	0.86	-1.1
1,918,162	+		MPMX19_01837	0.86	-1.5
1,918,163	-		MPMX19_01837	0.86	-1.0
1,918,163	-		MPMX19_01837	0.86	-1.0
1,918,286	+				-0.1
1,918,286	+				+0.5
1,918,286	+				+0.1
1,918,286	+				-0.1
1,918,286	+				+0.1
1,918,287	-				-1.5
1,918,287	-				+0.1
1,918,287	-				+1.1
1,918,287	-				-0.4
1,918,287	-				+1.3
1,918,287	-				+0.3
1,918,287	-				-2.5