Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01758

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,845,396	-				-0.2
1,845,478	+				-0.7
1,845,478	+				-0.2
1,845,478	+				+1.1
1,845,478	+				-0.6
1,845,478	+				-0.9
1,845,478	+				+0.8
1,845,478	+				+0.3
1,845,478	+				-1.1
1,845,478	+				-0.5
1,845,478	+				-0.5
1,845,478	+				-1.5
1,845,478	+				+0.1
1,845,478	+				-0.9
1,845,478	+				-1.5
1,845,478	+				-1.2
1,845,478	+				+0.6
1,845,478	+				-0.8
1,845,478	+				-0.9
1,845,478	+				-0.7
1,845,478	+				-0.3
1,845,479	-				-1.7
1,845,479	-				+1.8
1,845,479	-				-0.2
1,845,479	-				-0.3
1,845,479	-				-0.4
1,845,479	-				-1.1
1,845,479	-				-0.9
1,845,479	-				-1.4
1,845,479	-				-0.0
1,845,479	-				-0.3
1,845,479	-				-0.9
1,845,479	-				-0.9
1,845,479	-				-1.4
1,845,479	-				-1.2
1,845,479	-				-0.2
1,845,479	-				-1.5
1,845,479	-				+0.6
1,845,479	-				-0.5
1,845,479	-				-1.7
1,845,479	-				-1.5
1,845,479	-				+0.6
1,845,479	-				+0.2
1,845,479	-				-1.1
1,845,479	-				-2.0
1,845,479	-				-0.7
1,845,479	-				-0.9
1,845,505	+				+0.7
1,845,505	+				-0.1
1,845,505	+				-0.4
1,845,505	+				+0.1
1,845,505	+				+0.3
1,845,505	+				+0.5
1,845,506	-				-0.6
1,845,506	-				-1.2
1,845,506	-				+0.5
1,845,506	-				+0.8
1,845,506	-				-0.9
1,845,506	-				+0.1
1,845,506	-				-1.8
1,845,868	+		MPMX19_01757	0.44	-0.9
1,845,868	+		MPMX19_01757	0.44	-0.7
1,845,868	+		MPMX19_01757	0.44	+0.5
1,845,868	+		MPMX19_01757	0.44	-0.2
1,845,869	-		MPMX19_01757	0.44	-1.9
1,845,869	-		MPMX19_01757	0.44	-2.0
1,845,880	+		MPMX19_01757	0.46	+0.6
1,845,880	+		MPMX19_01757	0.46	-1.2
1,845,880	+		MPMX19_01757	0.46	+1.7
1,845,880	+		MPMX19_01757	0.46	-1.2
1,845,880	+		MPMX19_01757	0.46	-2.1
1,845,880	+		MPMX19_01757	0.46	+0.6
1,845,880	+		MPMX19_01757	0.46	-0.9
1,845,880	+		MPMX19_01757	0.46	+0.4
1,845,880	+		MPMX19_01757	0.46	-1.2
1,845,881	-		MPMX19_01757	0.46	-0.9
1,845,881	-		MPMX19_01757	0.46	-0.3
1,845,881	-		MPMX19_01757	0.46	-1.1
1,845,881	-		MPMX19_01757	0.46	+0.5
1,845,881	-		MPMX19_01757	0.46	-1.4
1,845,881	-		MPMX19_01757	0.46	-1.4
1,845,881	-		MPMX19_01757	0.46	-0.5
1,845,900	+		MPMX19_01757	0.48	+0.5
1,845,900	+		MPMX19_01757	0.48	-0.2
1,845,901	-		MPMX19_01757	0.48	+0.1
1,846,314	+				-0.9
1,846,315	-				-0.1
1,846,385	-				-0.2
1,846,495	+		MPMX19_01758	0.18	-0.2
1,846,496	-		MPMX19_01758	0.18	-1.0
1,846,609	+		MPMX19_01758	0.36	+0.0
1,846,609	+		MPMX19_01758	0.36	+0.1
1,846,609	+		MPMX19_01758	0.36	+0.8
1,846,609	+		MPMX19_01758	0.36	-0.5
1,846,609	+		MPMX19_01758	0.36	-0.5
1,846,609	+		MPMX19_01758	0.36	+0.7
1,846,609	+		MPMX19_01758	0.36	+0.4
1,846,609	+		MPMX19_01758	0.36	+1.5
1,846,609	+		MPMX19_01758	0.36	-1.5
1,846,609	+		MPMX19_01758	0.36	-0.4
1,846,609	+		MPMX19_01758	0.36	+0.8
1,846,609	+		MPMX19_01758	0.36	-2.4
1,846,610	-		MPMX19_01758	0.36	-0.5
1,846,610	-		MPMX19_01758	0.36	+0.6
1,846,610	-		MPMX19_01758	0.36	+0.4
1,846,610	-		MPMX19_01758	0.36	-0.2
1,846,610	-		MPMX19_01758	0.36	-0.5
1,846,610	-		MPMX19_01758	0.36	-1.2
1,846,610	-		MPMX19_01758	0.36	-2.8
1,846,610	-		MPMX19_01758	0.36	-0.4
1,846,610	-		MPMX19_01758	0.36	+0.2
1,846,610	-		MPMX19_01758	0.36	+0.1
1,846,610	-		MPMX19_01758	0.36	-0.9
1,846,610	-		MPMX19_01758	0.36	+1.3
1,846,610	-		MPMX19_01758	0.36	-1.5
1,846,610	-		MPMX19_01758	0.36	-0.5
1,846,623	+		MPMX19_01758	0.38	+1.3
1,846,623	+		MPMX19_01758	0.38	+1.1
1,846,624	-		MPMX19_01758	0.38	-1.9
1,846,624	-		MPMX19_01758	0.38	+0.2
1,846,741	+		MPMX19_01758	0.57	-1.4
1,846,741	+		MPMX19_01758	0.57	-0.2
1,846,741	+		MPMX19_01758	0.57	-1.1
1,846,741	+		MPMX19_01758	0.57	-1.0
1,846,741	+		MPMX19_01758	0.57	-0.0
1,846,741	+		MPMX19_01758	0.57	-1.9
1,846,741	+		MPMX19_01758	0.57	-0.7
1,846,741	+		MPMX19_01758	0.57	-1.9
1,846,741	+		MPMX19_01758	0.57	-0.2
1,846,741	+		MPMX19_01758	0.57	-0.0
1,846,741	+		MPMX19_01758	0.57	-1.7
1,846,741	+		MPMX19_01758	0.57	-1.4
1,846,742	-		MPMX19_01758	0.57	+0.0
1,846,742	-		MPMX19_01758	0.57	+0.8
1,846,742	-		MPMX19_01758	0.57	-1.1
1,846,742	-		MPMX19_01758	0.57	-1.2
1,846,742	-		MPMX19_01758	0.57	+0.3
1,846,742	-		MPMX19_01758	0.57	-0.9
1,846,742	-		MPMX19_01758	0.57	-1.0
1,846,742	-		MPMX19_01758	0.57	+0.9
1,846,742	-		MPMX19_01758	0.57	-0.6
1,846,742	-		MPMX19_01758	0.57	-2.2
1,846,742	-		MPMX19_01758	0.57	-0.5
1,846,742	-		MPMX19_01758	0.57	-2.0
1,846,742	-		MPMX19_01758	0.57	-0.9
1,846,742	-		MPMX19_01758	0.57	+0.8
1,846,742	-		MPMX19_01758	0.57	-1.3
1,846,742	-		MPMX19_01758	0.57	-0.4
1,846,742	-		MPMX19_01758	0.57	+0.0
1,846,742	-		MPMX19_01758	0.57	-2.2
1,846,742	-		MPMX19_01758	0.57	-0.5
1,846,742	-		MPMX19_01758	0.57	-1.1
1,846,742	-		MPMX19_01758	0.57	+0.5
1,846,768	+		MPMX19_01758	0.61	-1.4
1,846,768	+		MPMX19_01758	0.61	-0.9
1,846,769	-		MPMX19_01758	0.61	+1.4
1,846,769	-		MPMX19_01758	0.61	-0.2
1,847,049	-				-2.1
1,847,049	-				+1.1
1,847,072	-				-0.3
1,847,075	+				-0.7
1,847,075	+				+0.5
1,847,075	+				-0.7
1,847,075	+				+0.6
1,847,076	-				-0.4
1,847,076	-				-0.7
1,847,076	-				+1.1
1,847,076	-				+0.1
1,847,076	-				-0.2
1,847,076	-				-1.2
1,847,076	-				+0.2
1,847,076	-				-0.6
1,847,076	-				-0.5
1,847,076	-				-2.1
1,847,104	+				+1.2
1,847,104	+				-0.8
1,847,105	-				-0.9
1,847,105	-				+0.2
1,847,105	-				-1.1
1,847,105	-				-1.8
1,847,119	+				-1.9
1,847,119	+				-1.9
1,847,119	+				-1.2
1,847,120	-				-0.5
1,847,120	-				+0.1
1,847,617	+		MPMX19_01759	0.55	-2.4
1,847,617	+		MPMX19_01759	0.55	-0.4
1,847,617	+		MPMX19_01759	0.55	-0.2
1,847,617	+		MPMX19_01759	0.55	-1.1
1,847,617	+		MPMX19_01759	0.55	-1.1
1,847,617	+		MPMX19_01759	0.55	-0.0
1,847,617	+		MPMX19_01759	0.55	-0.7
1,847,617	+		MPMX19_01759	0.55	+1.8
1,847,617	+		MPMX19_01759	0.55	+0.7
1,847,617	+		MPMX19_01759	0.55	-0.4
1,847,617	+		MPMX19_01759	0.55	-2.3
1,847,617	+		MPMX19_01759	0.55	-0.7
1,847,617	+		MPMX19_01759	0.55	+0.5
1,847,617	+		MPMX19_01759	0.55	+0.9
1,847,617	+		MPMX19_01759	0.55	-1.2
1,847,617	+		MPMX19_01759	0.55	-0.7
1,847,617	+		MPMX19_01759	0.55	-1.5
1,847,618	-		MPMX19_01759	0.55	-0.7
1,847,618	-		MPMX19_01759	0.55	-0.5
1,847,618	-		MPMX19_01759	0.55	-0.4
1,847,618	-		MPMX19_01759	0.55	+1.1
1,847,618	-		MPMX19_01759	0.55	-0.2
1,847,618	-		MPMX19_01759	0.55	-1.4
1,847,618	-		MPMX19_01759	0.55	+0.1
1,847,618	-		MPMX19_01759	0.55	-1.2
1,847,618	-		MPMX19_01759	0.55	-0.2
1,847,618	-		MPMX19_01759	0.55	+0.5
1,847,618	-		MPMX19_01759	0.55	-2.0
1,847,618	-		MPMX19_01759	0.55	-0.1
1,847,618	-		MPMX19_01759	0.55	-1.6
1,847,618	-		MPMX19_01759	0.55	-0.5
1,847,618	-		MPMX19_01759	0.55	+0.2
1,847,683	+		MPMX19_01759	0.62	+0.5
1,847,703	-		MPMX19_01759	0.64	-1.9