Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01726

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,817,326	-				-1.6
1,817,326	-				+1.5
1,817,326	-				+0.5
1,817,353	+				-0.1
1,817,353	+				+0.5
1,817,353	+				-0.9
1,817,353	+				-0.3
1,817,353	+				-0.6
1,817,353	+				-1.4
1,817,353	+				-0.7
1,817,353	+				-0.7
1,817,353	+				+0.6
1,817,353	+				-0.5
1,817,353	+				-0.2
1,817,353	+				-0.9
1,817,353	+				+0.5
1,817,353	+				-1.6
1,817,353	+				-1.1
1,817,353	+				-0.9
1,817,353	+				-1.2
1,817,353	+				+0.8
1,817,353	+				+0.4
1,817,353	+				+0.5
1,817,353	+				-0.1
1,817,353	+				-2.6
1,817,353	+				-2.6
1,817,353	+				-1.6
1,817,353	+				-0.7
1,817,353	+				-1.5
1,817,353	+				-0.4
1,817,354	-				-0.9
1,817,354	-				+1.2
1,817,354	-				-1.1
1,817,354	-				+0.3
1,817,354	-				-2.6
1,817,354	-				-1.6
1,817,354	-				-0.6
1,817,354	-				-0.5
1,817,354	-				-0.1
1,817,354	-				-1.2
1,817,354	-				-2.7
1,817,354	-				-0.2
1,817,354	-				+0.6
1,817,390	+				-0.9
1,817,405	+				-0.5
1,817,405	+				+0.1
1,817,405	+				+0.3
1,817,405	+				-1.2
1,817,405	+				-0.7
1,817,405	+				-1.2
1,817,405	+				-2.2
1,817,405	+				-1.4
1,817,405	+				-1.7
1,817,405	+				+0.0
1,817,406	-				-2.0
1,817,406	-				-1.2
1,817,406	-				-1.1
1,817,406	-				-1.5
1,817,406	-				-2.2
1,817,406	-				-0.7
1,817,406	-				+1.3
1,817,406	-				-1.3
1,817,411	+				-1.2
1,817,411	+				-0.0
1,817,411	+				-0.1
1,817,411	+				-0.1
1,817,411	+				-1.2
1,817,411	+				-0.1
1,817,411	+				-0.4
1,817,411	+				+0.8
1,817,411	+				-0.4
1,817,412	-				-1.2
1,817,412	-				-1.8
1,817,412	-				-1.0
1,817,412	-				-0.2
1,817,412	-				-2.2
1,817,412	-				-0.6
1,817,412	-				+0.5
1,817,456	+		MPMX19_01725	0.14	-2.0
1,817,456	+		MPMX19_01725	0.14	-0.8
1,817,456	+		MPMX19_01725	0.14	-0.6
1,817,456	+		MPMX19_01725	0.14	-0.1
1,817,456	+		MPMX19_01725	0.14	-0.2
1,817,456	+		MPMX19_01725	0.14	-0.3
1,817,456	+		MPMX19_01725	0.14	-0.9
1,817,456	+		MPMX19_01725	0.14	+1.3
1,817,456	+		MPMX19_01725	0.14	+0.5
1,817,456	+		MPMX19_01725	0.14	-1.1
1,817,456	+		MPMX19_01725	0.14	-1.2
1,817,457	-		MPMX19_01725	0.14	-0.6
1,817,457	-		MPMX19_01725	0.14	-0.5
1,817,457	-		MPMX19_01725	0.14	-0.5
1,817,457	-		MPMX19_01725	0.14	-0.2
1,817,457	-		MPMX19_01725	0.14	-0.8
1,817,457	-		MPMX19_01725	0.14	-0.1
1,817,510	+		MPMX19_01725	0.25	-1.1
1,817,510	+		MPMX19_01725	0.25	-1.5
1,817,510	+		MPMX19_01725	0.25	-0.4
1,817,510	+		MPMX19_01725	0.25	-1.2
1,817,510	+		MPMX19_01725	0.25	+0.1
1,817,510	+		MPMX19_01725	0.25	+0.8
1,817,511	-		MPMX19_01725	0.26	-0.4
1,817,511	-		MPMX19_01725	0.26	-0.5
1,817,511	-		MPMX19_01725	0.26	+0.4
1,817,511	-		MPMX19_01725	0.26	-0.8
1,817,511	-		MPMX19_01725	0.26	-0.0
1,817,511	-		MPMX19_01725	0.26	-0.7
1,817,511	-		MPMX19_01725	0.26	-0.8
1,817,935	+				-0.0
1,817,935	+				-0.2
1,817,935	+				+0.3
1,817,935	+				-1.8
1,817,936	-				-0.1
1,817,936	-				+0.4
1,817,936	-				-0.2
1,817,947	+				-1.2
1,817,947	+				-1.2
1,817,947	+				+0.2
1,817,947	+				-1.1
1,817,947	+				-1.6
1,817,947	+				-2.0
1,817,948	-				-1.9
1,817,948	-				-1.2
1,817,948	-				+0.1
1,817,998	+		MPMX19_01726	0.13	-0.7
1,817,998	+		MPMX19_01726	0.13	+0.6
1,817,998	+		MPMX19_01726	0.13	+0.4
1,817,998	+		MPMX19_01726	0.13	+0.8
1,817,998	+		MPMX19_01726	0.13	-1.7
1,817,998	+		MPMX19_01726	0.13	+0.0
1,817,998	+		MPMX19_01726	0.13	-1.9
1,817,998	+		MPMX19_01726	0.13	-1.7
1,817,998	+		MPMX19_01726	0.13	+0.7
1,817,998	+		MPMX19_01726	0.13	-2.0
1,817,998	+		MPMX19_01726	0.13	+0.6
1,817,998	+		MPMX19_01726	0.13	+1.1
1,817,998	+		MPMX19_01726	0.13	-1.3
1,817,998	+		MPMX19_01726	0.13	+0.3
1,817,998	+		MPMX19_01726	0.13	-0.4
1,817,999	-		MPMX19_01726	0.13	+1.1
1,817,999	-		MPMX19_01726	0.13	-2.1
1,817,999	-		MPMX19_01726	0.13	+0.2
1,817,999	-		MPMX19_01726	0.13	-0.8
1,817,999	-		MPMX19_01726	0.13	-1.2
1,817,999	-		MPMX19_01726	0.13	-1.5
1,817,999	-		MPMX19_01726	0.13	-1.7
1,817,999	-		MPMX19_01726	0.13	-1.1
1,817,999	-		MPMX19_01726	0.13	-1.1
1,817,999	-		MPMX19_01726	0.13	-0.3
1,817,999	-		MPMX19_01726	0.13	+0.4
1,817,999	-		MPMX19_01726	0.13	-0.2
1,817,999	-		MPMX19_01726	0.13	-1.3
1,817,999	-		MPMX19_01726	0.13	-1.7
1,817,999	-		MPMX19_01726	0.13	-1.1
1,817,999	-		MPMX19_01726	0.13	+0.5
1,817,999	-		MPMX19_01726	0.13	+0.5
1,817,999	-		MPMX19_01726	0.13	-1.3
1,817,999	-		MPMX19_01726	0.13	-0.5
1,817,999	-		MPMX19_01726	0.13	-0.9
1,817,999	-		MPMX19_01726	0.13	-2.4
1,817,999	-		MPMX19_01726	0.13	-2.4
1,817,999	-		MPMX19_01726	0.13	-1.0
1,817,999	-		MPMX19_01726	0.13	-0.4
1,817,999	-		MPMX19_01726	0.13	+2.1
1,817,999	-		MPMX19_01726	0.13	-1.4
1,818,085	+		MPMX19_01726	0.22	+0.4
1,818,085	+		MPMX19_01726	0.22	-0.6
1,818,085	+		MPMX19_01726	0.22	-1.9
1,818,085	+		MPMX19_01726	0.22	-1.6
1,818,085	+		MPMX19_01726	0.22	-0.4
1,818,085	+		MPMX19_01726	0.22	-2.6
1,818,085	+		MPMX19_01726	0.22	-0.7
1,818,085	+		MPMX19_01726	0.22	+0.2
1,818,085	+		MPMX19_01726	0.22	-1.5
1,818,086	-		MPMX19_01726	0.23	-0.8
1,818,086	-		MPMX19_01726	0.23	+0.7
1,818,086	-		MPMX19_01726	0.23	-1.0
1,818,086	-		MPMX19_01726	0.23	-1.7
1,818,149	-		MPMX19_01726	0.30	-0.9
1,818,149	-		MPMX19_01726	0.30	+0.5
1,818,167	-		MPMX19_01726	0.32	+0.3
1,818,167	-		MPMX19_01726	0.32	+0.7
1,818,167	-		MPMX19_01726	0.32	-1.6
1,818,296	+		MPMX19_01726	0.46	-1.7
1,818,296	+		MPMX19_01726	0.46	+1.3
1,818,296	+		MPMX19_01726	0.46	-1.1
1,818,296	+		MPMX19_01726	0.46	-0.2
1,818,296	+		MPMX19_01726	0.46	-1.7
1,818,296	+		MPMX19_01726	0.46	+0.9
1,818,296	+		MPMX19_01726	0.46	-2.5
1,818,296	+		MPMX19_01726	0.46	-1.5
1,818,296	+		MPMX19_01726	0.46	-0.4
1,818,296	+		MPMX19_01726	0.46	+0.2
1,818,296	+		MPMX19_01726	0.46	-1.6
1,818,296	+		MPMX19_01726	0.46	-1.1
1,818,296	+		MPMX19_01726	0.46	-0.1
1,818,296	+		MPMX19_01726	0.46	-1.4
1,818,297	-		MPMX19_01726	0.46	+1.1
1,818,297	-		MPMX19_01726	0.46	-0.5
1,818,297	-		MPMX19_01726	0.46	-0.3
1,818,297	-		MPMX19_01726	0.46	-0.6
1,818,297	-		MPMX19_01726	0.46	-0.1
1,818,297	-		MPMX19_01726	0.46	-1.1
1,818,297	-		MPMX19_01726	0.46	-1.4
1,818,297	-		MPMX19_01726	0.46	-2.7
1,818,297	-		MPMX19_01726	0.46	+0.1
1,818,297	-		MPMX19_01726	0.46	-0.4
1,818,297	-		MPMX19_01726	0.46	-0.2
1,818,297	-		MPMX19_01726	0.46	-0.4
1,818,297	-		MPMX19_01726	0.46	-1.4
1,818,523	+		MPMX19_01726	0.71	-0.3
1,818,523	+		MPMX19_01726	0.71	-2.2
1,818,523	+		MPMX19_01726	0.71	-1.3
1,818,523	+		MPMX19_01726	0.71	-0.6
1,818,523	+		MPMX19_01726	0.71	-1.3
1,818,524	-		MPMX19_01726	0.71	+0.5
1,818,524	-		MPMX19_01726	0.71	-0.3
1,818,524	-		MPMX19_01726	0.71	-0.1
1,818,524	-		MPMX19_01726	0.71	-0.7
1,818,524	-		MPMX19_01726	0.71	-2.5
1,818,524	-		MPMX19_01726	0.71	-1.3
1,818,524	-		MPMX19_01726	0.71	-0.7
1,818,524	-		MPMX19_01726	0.71	+0.4
1,818,625	+		MPMX19_01726	0.82	-1.0
1,818,625	+		MPMX19_01726	0.82	-0.3
1,818,625	+		MPMX19_01726	0.82	+0.1
1,818,625	+		MPMX19_01726	0.82	-0.1
1,818,625	+		MPMX19_01726	0.82	-0.9
1,818,625	+		MPMX19_01726	0.82	-0.7
1,818,625	+		MPMX19_01726	0.82	-1.9
1,818,626	-		MPMX19_01726	0.83	-0.3
1,818,626	-		MPMX19_01726	0.83	-0.1
1,818,626	-		MPMX19_01726	0.83	-0.0
1,818,626	-		MPMX19_01726	0.83	-0.4
1,818,626	-		MPMX19_01726	0.83	-0.5
1,818,626	-		MPMX19_01726	0.83	-1.4
1,818,713	+				-0.2
1,818,714	-				-1.3
1,818,845	-				+0.1
1,818,919	+				+0.1
1,818,920	-				+0.7
1,818,920	-				+0.5
1,818,945	+				-0.9
1,818,945	+				-1.2
1,818,945	+				-0.3
1,818,945	+				+0.1
1,818,945	+				+0.5
1,818,945	+				-1.2
1,818,945	+				-0.3
1,818,945	+				-0.7
1,818,946	-				+0.5
1,818,946	-				-1.1
1,818,946	-				-1.5
1,818,960	+				-2.2
1,818,960	+				-1.8
1,818,961	-				+1.1
1,818,961	-				+0.1
1,818,967	+				+0.1
1,818,967	+				-0.0
1,818,967	+				-1.7
1,818,967	+				-0.3
1,818,968	-				-1.1
1,818,968	-				-0.1
1,819,083	+				+0.8
1,819,084	-				-0.7
1,819,092	+				-1.4
1,819,176	-				-0.4
1,819,176	-				-3.1
1,819,185	-				+0.1
1,819,275	+				-0.1
1,819,275	+				-0.7
1,819,282	+				+1.0
1,819,283	-				-0.2
1,819,283	-				+0.7
1,819,389	+		MPMX19_01727	0.20	-0.6
1,819,390	-		MPMX19_01727	0.20	+0.5
1,819,390	-		MPMX19_01727	0.20	+0.1
1,819,632	+		MPMX19_01727	0.62	+0.1
1,819,633	-		MPMX19_01727	0.62	-1.6
1,819,633	-		MPMX19_01727	0.62	-0.2
1,819,633	-		MPMX19_01727	0.62	-0.6
1,819,782	+		MPMX19_01727	0.88	-1.1
1,819,782	+		MPMX19_01727	0.88	-1.1