Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01624

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,702,534	+		MPMX19_01623	0.71	-1.6
1,702,534	+		MPMX19_01623	0.71	+1.4
1,702,534	+		MPMX19_01623	0.71	+2.5
1,702,534	+		MPMX19_01623	0.71	-2.2
1,702,535	-		MPMX19_01623	0.71	-0.8
1,702,549	+		MPMX19_01623	0.71	-1.6
1,702,549	+		MPMX19_01623	0.71	-0.3
1,702,549	+		MPMX19_01623	0.71	+0.6
1,702,549	+		MPMX19_01623	0.71	+0.1
1,702,549	+		MPMX19_01623	0.71	-1.3
1,702,549	+		MPMX19_01623	0.71	-0.3
1,702,549	+		MPMX19_01623	0.71	+0.1
1,702,549	+		MPMX19_01623	0.71	-2.5
1,702,550	-		MPMX19_01623	0.71	-0.4
1,702,550	-		MPMX19_01623	0.71	-1.5
1,702,550	-		MPMX19_01623	0.71	-1.4
1,702,550	-		MPMX19_01623	0.71	+0.1
1,702,550	-		MPMX19_01623	0.71	-1.4
1,702,550	-		MPMX19_01623	0.71	-1.5
1,702,550	-		MPMX19_01623	0.71	+0.3
1,702,550	-		MPMX19_01623	0.71	+0.1
1,702,651	+		MPMX19_01623	0.77	+0.5
1,702,651	+		MPMX19_01623	0.77	-1.5
1,702,651	+		MPMX19_01623	0.77	-0.3
1,702,651	+		MPMX19_01623	0.77	-0.8
1,702,651	+		MPMX19_01623	0.77	+1.1
1,702,651	+		MPMX19_01623	0.77	-0.1
1,702,651	+		MPMX19_01623	0.77	+0.1
1,702,651	+		MPMX19_01623	0.77	-0.3
1,702,651	+		MPMX19_01623	0.77	-1.1
1,702,651	+		MPMX19_01623	0.77	-0.2
1,702,651	+		MPMX19_01623	0.77	+0.1
1,702,651	+		MPMX19_01623	0.77	+1.1
1,702,651	+		MPMX19_01623	0.77	-0.6
1,702,651	+		MPMX19_01623	0.77	-0.8
1,702,652	-		MPMX19_01623	0.78	+0.1
1,702,652	-		MPMX19_01623	0.78	-0.8
1,702,652	-		MPMX19_01623	0.78	-0.5
1,702,652	-		MPMX19_01623	0.78	+0.2
1,702,652	-		MPMX19_01623	0.78	-0.1
1,702,652	-		MPMX19_01623	0.78	-0.4
1,702,652	-		MPMX19_01623	0.78	+0.1
1,702,652	-		MPMX19_01623	0.78	-0.3
1,702,652	-		MPMX19_01623	0.78	-1.0
1,702,652	-		MPMX19_01623	0.78	-1.2
1,702,652	-		MPMX19_01623	0.78	+0.2
1,702,652	-		MPMX19_01623	0.78	-1.3
1,702,652	-		MPMX19_01623	0.78	-0.5
1,702,652	-		MPMX19_01623	0.78	-1.1
1,702,652	-		MPMX19_01623	0.78	+0.7
1,702,652	-		MPMX19_01623	0.78	+1.7
1,702,652	-		MPMX19_01623	0.78	-1.4
1,702,652	-		MPMX19_01623	0.78	+3.1
1,702,652	-		MPMX19_01623	0.78	+0.1
1,702,652	-		MPMX19_01623	0.78	-1.8
1,702,652	-		MPMX19_01623	0.78	-1.2
1,702,663	+		MPMX19_01623	0.78	-0.9
1,702,663	+		MPMX19_01623	0.78	-0.3
1,702,663	+		MPMX19_01623	0.78	-1.6
1,702,663	+		MPMX19_01623	0.78	-0.4
1,702,663	+		MPMX19_01623	0.78	+0.2
1,702,664	-		MPMX19_01623	0.78	+1.1
1,702,804	+		MPMX19_01623	0.87	+1.1
1,702,804	+		MPMX19_01623	0.87	+0.1
1,702,805	-		MPMX19_01623	0.87	-0.8
1,702,822	+		MPMX19_01623	0.88	-0.8
1,702,822	+		MPMX19_01623	0.88	-0.8
1,702,822	+		MPMX19_01623	0.88	+2.1
1,702,822	+		MPMX19_01623	0.88	-0.3
1,702,822	+		MPMX19_01623	0.88	-1.1
1,702,822	+		MPMX19_01623	0.88	+0.5
1,702,822	+		MPMX19_01623	0.88	-0.9
1,702,822	+		MPMX19_01623	0.88	-0.5
1,702,822	+		MPMX19_01623	0.88	-1.4
1,702,822	+		MPMX19_01623	0.88	-1.3
1,702,822	+		MPMX19_01623	0.88	-1.9
1,702,822	+		MPMX19_01623	0.88	+0.5
1,702,822	+		MPMX19_01623	0.88	-1.4
1,702,822	+		MPMX19_01623	0.88	+0.1
1,702,822	+		MPMX19_01623	0.88	-0.1
1,702,823	-		MPMX19_01623	0.88	-2.9
1,702,823	-		MPMX19_01623	0.88	+0.1
1,702,823	-		MPMX19_01623	0.88	-0.5
1,702,823	-		MPMX19_01623	0.88	-0.8
1,702,823	-		MPMX19_01623	0.88	-0.9
1,702,823	-		MPMX19_01623	0.88	-0.5
1,702,823	-		MPMX19_01623	0.88	+0.2
1,702,823	-		MPMX19_01623	0.88	+1.6
1,702,823	-		MPMX19_01623	0.88	-1.4
1,702,823	-		MPMX19_01623	0.88	+0.3
1,702,823	-		MPMX19_01623	0.88	+0.3
1,702,823	-		MPMX19_01623	0.88	+0.1
1,702,823	-		MPMX19_01623	0.88	+0.1
1,702,823	-		MPMX19_01623	0.88	-0.3
1,702,823	-		MPMX19_01623	0.88	+0.1
1,702,823	-		MPMX19_01623	0.88	-0.1
1,702,823	-		MPMX19_01623	0.88	-0.1
1,702,823	-		MPMX19_01623	0.88	-0.8
1,702,824	-		MPMX19_01623	0.88	+0.1
1,702,825	+		MPMX19_01623	0.88	+0.4
1,702,825	+		MPMX19_01623	0.88	-0.3
1,702,825	+		MPMX19_01623	0.88	-1.4
1,702,825	+		MPMX19_01623	0.88	-0.8
1,702,825	+		MPMX19_01623	0.88	+1.2
1,702,825	+		MPMX19_01623	0.88	+0.5
1,702,825	+		MPMX19_01623	0.88	-0.5
1,702,826	-		MPMX19_01623	0.88	-0.2
1,702,826	-		MPMX19_01623	0.88	+0.2
1,702,826	-		MPMX19_01623	0.88	+0.9
1,702,826	-		MPMX19_01623	0.88	+1.4
1,702,826	-		MPMX19_01623	0.88	-1.4
1,702,826	-		MPMX19_01623	0.88	-0.3
1,702,826	-		MPMX19_01623	0.88	-0.1
1,702,840	+		MPMX19_01623	0.89	-1.6
1,702,840	+		MPMX19_01623	0.89	-0.8
1,702,841	-		MPMX19_01623	0.89	+1.3
1,702,841	-		MPMX19_01623	0.89	+0.6
1,702,841	-		MPMX19_01623	0.89	-1.4
1,702,841	-		MPMX19_01623	0.89	-0.1
1,702,912	+				-0.8
1,702,912	+				-0.1
1,702,912	+				-0.4
1,702,912	+				-0.1
1,702,912	+				-1.1
1,702,912	+				+1.2
1,702,912	+				-1.3
1,702,912	+				+0.2
1,702,912	+				-1.5
1,702,913	-				-1.1
1,702,913	-				-0.5
1,702,913	-				-0.5
1,702,913	-				+0.7
1,702,913	-				-0.8
1,702,913	-				-0.5
1,702,913	-				-0.5
1,702,993	+				+0.2
1,702,993	+				+0.6
1,702,993	+				-0.9
1,702,993	+				-1.0
1,702,993	+				-2.2
1,702,993	+				-0.1
1,702,993	+				+0.1
1,702,993	+				-1.1
1,702,993	+				+0.3
1,702,993	+				+0.5
1,702,993	+				-0.8
1,702,993	+				-0.2
1,702,993	+				-2.2
1,702,993	+				-1.2
1,702,993	+				-0.9
1,702,993	+				-2.0
1,702,993	+				-1.0
1,702,993	+				-0.2
1,702,993	+				-0.6
1,702,994	-				-1.5
1,702,994	-				-0.5
1,702,994	-				+0.1
1,702,994	-				+0.4
1,702,994	-				+0.1
1,702,994	-				+0.5
1,702,994	-				-0.8
1,702,994	-				-2.2
1,702,994	-				+1.6
1,702,994	-				-0.5
1,702,994	-				-0.7
1,702,994	-				+1.1
1,702,994	-				+2.1
1,702,994	-				-0.9
1,702,994	-				-1.8
1,702,994	-				-1.1
1,702,994	-				-1.3
1,702,994	-				-0.6
1,703,011	+				-0.8
1,703,011	+				+0.2
1,703,011	+				-0.1
1,703,012	-				-1.3
1,703,012	-				+0.4
1,703,012	-				-0.9
1,703,012	-				-0.9
1,703,012	-				+1.1
1,703,134	+				-0.7
1,703,135	-				+0.7
1,703,216	+				-0.3
1,703,216	+				-1.6
1,703,216	+				-1.1
1,703,216	+				-1.6
1,703,216	+				-0.5
1,703,217	-				-0.1
1,703,217	-				+2.1
1,703,433	+		MPMX19_01624	0.26	+0.1
1,703,433	+		MPMX19_01624	0.26	+1.7
1,703,433	+		MPMX19_01624	0.26	-0.5
1,703,433	+		MPMX19_01624	0.26	+0.3
1,703,433	+		MPMX19_01624	0.26	+0.2
1,703,433	+		MPMX19_01624	0.26	+1.1
1,703,433	+		MPMX19_01624	0.26	-0.3
1,703,433	+		MPMX19_01624	0.26	-1.1
1,703,433	+		MPMX19_01624	0.26	+1.7
1,703,433	+		MPMX19_01624	0.26	+0.6
1,703,433	+		MPMX19_01624	0.26	-1.5
1,703,433	+		MPMX19_01624	0.26	+0.8
1,703,433	+		MPMX19_01624	0.26	-2.0
1,703,433	+		MPMX19_01624	0.26	+0.3
1,703,433	+		MPMX19_01624	0.26	-0.6
1,703,433	+		MPMX19_01624	0.26	-2.2
1,703,434	-		MPMX19_01624	0.26	-0.0
1,703,434	-		MPMX19_01624	0.26	+0.7
1,703,434	-		MPMX19_01624	0.26	-0.3
1,703,434	-		MPMX19_01624	0.26	-1.5
1,703,434	-		MPMX19_01624	0.26	+0.2
1,703,434	-		MPMX19_01624	0.26	+0.2
1,703,434	-		MPMX19_01624	0.26	+1.6
1,703,434	-		MPMX19_01624	0.26	-0.5
1,703,434	-		MPMX19_01624	0.26	-0.5
1,703,434	-		MPMX19_01624	0.26	+0.6
1,703,434	-		MPMX19_01624	0.26	+0.1
1,703,434	-		MPMX19_01624	0.26	-0.4
1,703,434	-		MPMX19_01624	0.26	-0.4
1,703,434	-		MPMX19_01624	0.26	+0.2
1,703,434	-		MPMX19_01624	0.26	-0.8
1,703,434	-		MPMX19_01624	0.26	-1.9
1,703,870	+		MPMX19_01625	0.12	-0.3
1,703,870	+		MPMX19_01625	0.12	-1.1
1,703,870	+		MPMX19_01625	0.12	+0.6
1,703,870	+		MPMX19_01625	0.12	+0.1
1,703,870	+		MPMX19_01625	0.12	-1.4
1,703,870	+		MPMX19_01625	0.12	+0.3
1,703,870	+		MPMX19_01625	0.12	-1.1
1,703,870	+		MPMX19_01625	0.12	-0.9
1,703,870	+		MPMX19_01625	0.12	-1.1
1,703,870	+		MPMX19_01625	0.12	-1.3
1,703,870	+		MPMX19_01625	0.12	-0.3
1,703,870	+		MPMX19_01625	0.12	-0.9
1,703,870	+		MPMX19_01625	0.12	+0.8
1,703,870	+		MPMX19_01625	0.12	-0.9
1,703,870	+		MPMX19_01625	0.12	-1.4
1,703,870	+		MPMX19_01625	0.12	-0.3
1,703,870	+		MPMX19_01625	0.12	-1.8
1,703,871	-		MPMX19_01625	0.13	-0.9
1,703,871	-		MPMX19_01625	0.13	-0.3
1,703,871	-		MPMX19_01625	0.13	-0.5
1,703,871	-		MPMX19_01625	0.13	-2.3
1,703,871	-		MPMX19_01625	0.13	-0.5
1,703,871	-		MPMX19_01625	0.13	-1.1
1,703,871	-		MPMX19_01625	0.13	-0.1
1,703,871	-		MPMX19_01625	0.13	-0.8
1,703,871	-		MPMX19_01625	0.13	-2.3
1,703,871	-		MPMX19_01625	0.13	-0.3
1,703,871	-		MPMX19_01625	0.13	-2.5
1,703,871	-		MPMX19_01625	0.13	+0.1
1,703,871	-		MPMX19_01625	0.13	+0.5
1,703,871	-		MPMX19_01625	0.13	-0.9
1,703,871	-		MPMX19_01625	0.13	-1.6
1,703,871	-		MPMX19_01625	0.13	-1.4
1,703,871	-		MPMX19_01625	0.13	-1.3
1,703,871	-		MPMX19_01625	0.13	+0.7
1,703,871	-		MPMX19_01625	0.13	+0.8
1,703,871	-		MPMX19_01625	0.13	+0.6
1,703,871	-		MPMX19_01625	0.13	-1.9
1,703,871	-		MPMX19_01625	0.13	+0.2
1,703,871	-		MPMX19_01625	0.13	+0.6
1,703,871	-		MPMX19_01625	0.13	-1.6
1,703,871	-		MPMX19_01625	0.13	-0.5
1,703,954	+		MPMX19_01625	0.19	-1.5
1,703,954	+		MPMX19_01625	0.19	-1.3
1,703,954	+		MPMX19_01625	0.19	+0.1
1,703,954	+		MPMX19_01625	0.19	-1.9
1,703,955	-		MPMX19_01625	0.19	-1.9
1,703,955	-		MPMX19_01625	0.19	-1.6
1,703,966	+		MPMX19_01625	0.20	+0.9
1,703,966	+		MPMX19_01625	0.20	-1.1
1,703,966	+		MPMX19_01625	0.20	-1.1
1,703,966	+		MPMX19_01625	0.20	+0.1
1,703,966	+		MPMX19_01625	0.20	+1.2
1,703,966	+		MPMX19_01625	0.20	-2.0
1,703,967	-		MPMX19_01625	0.20	-0.9
1,703,967	-		MPMX19_01625	0.20	+0.2
1,703,967	-		MPMX19_01625	0.20	+0.8
1,703,967	-		MPMX19_01625	0.20	-0.5
1,703,967	-		MPMX19_01625	0.20	-1.8
1,703,967	-		MPMX19_01625	0.20	-0.9
1,703,967	-		MPMX19_01625	0.20	-0.5
1,703,967	-		MPMX19_01625	0.20	+1.1
1,703,967	-		MPMX19_01625	0.20	-1.3
1,703,967	-		MPMX19_01625	0.20	-0.6
1,703,997	+		MPMX19_01625	0.22	-0.5
1,703,997	+		MPMX19_01625	0.22	+0.2
1,704,026	+		MPMX19_01625	0.24	+0.1
1,704,026	+		MPMX19_01625	0.24	+1.3
1,704,026	+		MPMX19_01625	0.24	-1.1
1,704,026	+		MPMX19_01625	0.24	+0.8
1,704,026	+		MPMX19_01625	0.24	-0.8
1,704,026	+		MPMX19_01625	0.24	-0.1
1,704,026	+		MPMX19_01625	0.24	-1.8
1,704,026	+		MPMX19_01625	0.24	-0.3
1,704,026	+		MPMX19_01625	0.24	-1.1
1,704,026	+		MPMX19_01625	0.24	-0.9
1,704,026	+		MPMX19_01625	0.24	-1.2
1,704,026	+		MPMX19_01625	0.24	-1.4
1,704,026	+		MPMX19_01625	0.24	-0.3
1,704,026	+		MPMX19_01625	0.24	-0.5
1,704,027	-		MPMX19_01625	0.24	-1.4
1,704,027	-		MPMX19_01625	0.24	-0.0
1,704,027	-		MPMX19_01625	0.24	-0.5
1,704,027	-		MPMX19_01625	0.24	+0.7
1,704,027	-		MPMX19_01625	0.24	-0.8
1,704,027	-		MPMX19_01625	0.24	-0.4
1,704,027	-		MPMX19_01625	0.24	+0.5
1,704,027	-		MPMX19_01625	0.24	-0.1
1,704,027	-		MPMX19_01625	0.24	+1.1
1,704,027	-		MPMX19_01625	0.24	-0.4
1,704,027	-		MPMX19_01625	0.24	-0.6
1,704,162	+		MPMX19_01625	0.34	+1.6
1,704,163	-		MPMX19_01625	0.34	+0.5
1,704,163	-		MPMX19_01625	0.34	-1.1
1,704,404	+		MPMX19_01625	0.52	-0.4
1,704,404	+		MPMX19_01625	0.52	-0.4
1,704,404	+		MPMX19_01625	0.52	-0.8
1,704,405	-		MPMX19_01625	0.52	+0.1
1,704,405	-		MPMX19_01625	0.52	-1.6
1,704,405	-		MPMX19_01625	0.52	-1.8
1,704,405	-		MPMX19_01625	0.52	-2.1
1,704,405	-		MPMX19_01625	0.52	-0.1
1,704,593	+		MPMX19_01625	0.66	+0.5
1,704,594	-		MPMX19_01625	0.66	-0.3