Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01594

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,667,914	-		MPMX19_01593	0.61	-1.8
1,667,914	-		MPMX19_01593	0.61	-3.0
1,667,914	-		MPMX19_01593	0.61	-0.6
1,667,914	-		MPMX19_01593	0.61	-1.2
1,667,914	-		MPMX19_01593	0.61	+0.2
1,668,088	-		MPMX19_01593	0.72	-1.9
1,668,088	-		MPMX19_01593	0.72	-0.5
1,668,088	-		MPMX19_01593	0.72	-1.1
1,668,088	-		MPMX19_01593	0.72	-0.9
1,668,088	-		MPMX19_01593	0.72	-0.8
1,668,103	-		MPMX19_01593	0.73	+0.1
1,668,103	-		MPMX19_01593	0.73	+0.3
1,668,103	-		MPMX19_01593	0.73	+0.5
1,668,564	-				-0.2
1,668,564	-				-0.4
1,668,564	-				-0.5
1,668,564	-				+0.1
1,668,564	-				-1.4
1,668,564	-				-0.7
1,668,564	-				-0.1
1,668,564	-				+0.6
1,668,564	-				-1.5
1,668,564	-				-1.0
1,668,795	+		MPMX19_01594	0.11	-1.1
1,668,795	+		MPMX19_01594	0.11	+1.3
1,668,795	+		MPMX19_01594	0.11	+0.1
1,668,795	+		MPMX19_01594	0.11	-1.1
1,668,796	-		MPMX19_01594	0.11	+0.8
1,668,796	-		MPMX19_01594	0.11	-0.6
1,668,796	-		MPMX19_01594	0.11	-0.9
1,668,796	-		MPMX19_01594	0.11	-1.4
1,668,796	-		MPMX19_01594	0.11	-1.1
1,668,796	-		MPMX19_01594	0.11	+0.3
1,668,798	-		MPMX19_01594	0.12	-0.9
1,668,939	+		MPMX19_01594	0.22	-1.4
1,668,939	+		MPMX19_01594	0.22	-0.0
1,668,939	+		MPMX19_01594	0.22	-2.3
1,668,939	+		MPMX19_01594	0.22	+0.1
1,668,939	+		MPMX19_01594	0.22	+1.2
1,668,939	+		MPMX19_01594	0.22	-0.8
1,668,939	+		MPMX19_01594	0.22	-1.9
1,668,939	+		MPMX19_01594	0.22	-0.2
1,668,939	+		MPMX19_01594	0.22	-0.3
1,668,939	+		MPMX19_01594	0.22	-0.6
1,668,939	+		MPMX19_01594	0.22	-0.7
1,668,939	+		MPMX19_01594	0.22	+0.1
1,668,939	+		MPMX19_01594	0.22	-0.1
1,668,939	+		MPMX19_01594	0.22	+1.1
1,668,939	+		MPMX19_01594	0.22	-0.0
1,668,939	+		MPMX19_01594	0.22	-1.1
1,668,939	+		MPMX19_01594	0.22	-0.3
1,668,939	+		MPMX19_01594	0.22	+0.3
1,668,939	+		MPMX19_01594	0.22	-0.3
1,668,939	+		MPMX19_01594	0.22	-1.7
1,668,939	+		MPMX19_01594	0.22	-0.0
1,668,939	+		MPMX19_01594	0.22	-0.5
1,668,940	-		MPMX19_01594	0.22	-0.3
1,668,940	-		MPMX19_01594	0.22	-0.2
1,668,940	-		MPMX19_01594	0.22	-1.5
1,668,940	-		MPMX19_01594	0.22	+0.2
1,668,940	-		MPMX19_01594	0.22	+0.3
1,668,940	-		MPMX19_01594	0.22	+0.2
1,668,940	-		MPMX19_01594	0.22	+0.5
1,668,940	-		MPMX19_01594	0.22	-0.8
1,668,940	-		MPMX19_01594	0.22	+0.4
1,669,394	-		MPMX19_01594	0.54	+1.6
1,669,394	-		MPMX19_01594	0.54	-0.5
1,669,794	+		MPMX19_01594	0.83	-0.8
1,669,794	+		MPMX19_01594	0.83	-0.6
1,669,794	+		MPMX19_01594	0.83	-0.8
1,669,794	+		MPMX19_01594	0.83	-0.3
1,669,794	+		MPMX19_01594	0.83	+0.2
1,669,794	+		MPMX19_01594	0.83	+0.2
1,669,795	-		MPMX19_01594	0.83	+1.2
1,669,795	-		MPMX19_01594	0.83	-0.1
1,669,795	-		MPMX19_01594	0.83	+0.2
1,669,795	-		MPMX19_01594	0.83	-0.5
1,669,795	-		MPMX19_01594	0.83	-2.0
1,669,795	-		MPMX19_01594	0.83	+0.7
1,669,795	-		MPMX19_01594	0.83	-0.6
1,669,795	-		MPMX19_01594	0.83	-0.6
1,669,830	+		MPMX19_01594	0.85	+0.9
1,669,831	-		MPMX19_01594	0.85	-2.0
1,669,884	+		MPMX19_01594	0.89	-0.9
1,669,884	+		MPMX19_01594	0.89	-0.3
1,669,884	+		MPMX19_01594	0.89	+0.7
1,669,885	-		MPMX19_01594	0.89	-0.6
1,669,885	-		MPMX19_01594	0.89	-0.5
1,669,926	+				-0.5
1,669,926	+				-1.5
1,669,927	-				-1.3
1,669,927	-				-0.5
1,669,927	-				-1.3
1,669,944	+				-0.1
1,669,944	+				+1.4
1,669,944	+				-1.3
1,669,945	-				-0.1
1,669,945	-				+0.1
1,670,100	+				+0.2
1,670,100	+				-0.3
1,670,100	+				-1.1
1,670,100	+				+0.5
1,670,101	-				+1.7
1,670,101	-				-1.1
1,670,101	-				-0.5
1,670,101	-				-1.4
1,670,143	-				-0.3
1,670,143	-				-1.4
1,670,296	+				-0.6
1,670,385	+				-0.4
1,670,385	+				-0.4
1,670,385	+				-0.3
1,670,385	+				+0.1
1,670,385	+				-1.1
1,670,385	+				+0.1
1,670,385	+				-1.5
1,670,385	+				+0.3
1,670,385	+				-0.8
1,670,385	+				-1.8
1,670,385	+				+0.1
1,670,385	+				+0.3
1,670,385	+				-0.9
1,670,385	+				-1.4
1,670,385	+				-0.3
1,670,385	+				+0.2
1,670,385	+				+0.7
1,670,385	+				-0.3
1,670,386	-				-0.3
1,670,386	-				-0.9
1,670,386	-				-0.5
1,670,386	-				+0.2
1,670,386	-				-2.3
1,670,386	-				-0.5
1,670,386	-				-1.1
1,670,859	+		MPMX19_01595	0.38	-0.4
1,670,859	+		MPMX19_01595	0.38	+0.6
1,670,859	+		MPMX19_01595	0.38	+0.2
1,670,859	+		MPMX19_01595	0.38	-1.6
1,670,860	-		MPMX19_01595	0.38	+0.5
1,670,860	-		MPMX19_01595	0.38	-0.8
1,670,862	+		MPMX19_01595	0.38	-0.4
1,670,862	+		MPMX19_01595	0.38	-1.3
1,670,862	+		MPMX19_01595	0.38	-1.4
1,670,862	+		MPMX19_01595	0.38	+0.1
1,670,862	+		MPMX19_01595	0.38	+0.4
1,670,862	+		MPMX19_01595	0.38	+0.1
1,670,863	-		MPMX19_01595	0.38	-0.8
1,670,863	-		MPMX19_01595	0.38	-0.4
1,670,863	-		MPMX19_01595	0.38	-1.5
1,670,863	-		MPMX19_01595	0.38	+0.1
1,670,863	-		MPMX19_01595	0.38	+0.2
1,670,863	-		MPMX19_01595	0.38	+0.7
1,670,863	-		MPMX19_01595	0.38	-0.9
1,670,863	-		MPMX19_01595	0.38	-0.3
1,670,904	+		MPMX19_01595	0.42	+0.5
1,670,904	+		MPMX19_01595	0.42	+0.6
1,670,904	+		MPMX19_01595	0.42	-0.6
1,670,904	+		MPMX19_01595	0.42	-0.2
1,670,904	+		MPMX19_01595	0.42	-0.9
1,670,904	+		MPMX19_01595	0.42	-1.2
1,670,904	+		MPMX19_01595	0.42	+0.2
1,670,904	+		MPMX19_01595	0.42	+0.4
1,670,904	+		MPMX19_01595	0.42	-0.9
1,670,904	+		MPMX19_01595	0.42	+0.2
1,670,904	+		MPMX19_01595	0.42	-0.1
1,670,904	+		MPMX19_01595	0.42	-0.9
1,670,904	+		MPMX19_01595	0.42	-0.6
1,670,904	+		MPMX19_01595	0.42	-1.9
1,670,904	+		MPMX19_01595	0.42	+0.3
1,670,904	+		MPMX19_01595	0.42	+0.5
1,670,904	+		MPMX19_01595	0.42	-1.1
1,670,905	-		MPMX19_01595	0.42	-0.9
1,670,905	-		MPMX19_01595	0.42	-1.1
1,670,905	-		MPMX19_01595	0.42	-0.9
1,670,905	-		MPMX19_01595	0.42	-0.0
1,670,905	-		MPMX19_01595	0.42	-1.3
1,670,905	-		MPMX19_01595	0.42	-1.1
1,670,905	-		MPMX19_01595	0.42	-1.0
1,670,905	-		MPMX19_01595	0.42	-1.1
1,670,905	-		MPMX19_01595	0.42	-0.8
1,670,905	-		MPMX19_01595	0.42	-0.3
1,670,905	-		MPMX19_01595	0.42	+0.5
1,670,919	+		MPMX19_01595	0.43	+0.3
1,670,919	+		MPMX19_01595	0.43	-1.0
1,670,919	+		MPMX19_01595	0.43	+0.5
1,670,919	+		MPMX19_01595	0.43	-0.8
1,670,919	+		MPMX19_01595	0.43	-0.4
1,670,920	-		MPMX19_01595	0.43	-1.9
1,670,920	-		MPMX19_01595	0.43	-0.8
1,670,990	+		MPMX19_01595	0.49	-0.8