Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01570

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,646,015	+		MPMX19_01569	0.62	+0.0
1,646,200	+				-1.5
1,646,200	+				-1.1
1,646,200	+				-0.8
1,646,200	+				-2.6
1,646,200	+				-0.3
1,646,200	+				+0.1
1,646,200	+				+0.5
1,646,201	-				-1.7
1,646,201	-				+0.4
1,646,201	-				-0.7
1,646,201	-				+0.4
1,646,201	-				-0.1
1,646,201	-				-0.9
1,646,201	-				+0.0
1,646,202	+				+1.0
1,646,202	+				-0.3
1,646,202	+				+0.1
1,646,202	+				-1.1
1,646,202	+				-1.1
1,646,202	+				+0.5
1,646,202	+				-1.0
1,646,202	+				-0.9
1,646,202	+				-1.0
1,646,202	+				-0.3
1,646,202	+				-0.3
1,646,202	+				-0.4
1,646,202	+				-0.5
1,646,202	+				-1.1
1,646,202	+				-2.4
1,646,202	+				-0.5
1,646,202	+				-1.1
1,646,202	+				-1.3
1,646,202	+				-0.3
1,646,202	+				+1.2
1,646,202	+				+0.2
1,646,202	+				+0.6
1,646,202	+				-1.1
1,646,202	+				-1.1
1,646,202	+				+0.3
1,646,202	+				+0.3
1,646,202	+				-0.9
1,646,202	+				-0.5
1,646,202	+				+1.0
1,646,203	-				+0.3
1,646,203	-				+0.5
1,646,203	-				+0.7
1,646,203	-				+0.7
1,646,203	-				-1.7
1,646,203	-				+0.3
1,646,203	-				-0.3
1,646,203	-				-0.8
1,646,203	-				-1.0
1,646,203	-				+0.0
1,646,203	-				+0.2
1,646,203	-				-0.1
1,646,203	-				-0.1
1,646,203	-				+0.5
1,646,203	-				-0.5
1,646,203	-				-0.5
1,646,203	-				-0.5
1,646,203	-				-0.3
1,646,239	+				-0.5
1,646,239	+				+0.6
1,646,239	+				+0.8
1,646,239	+				-2.1
1,646,239	+				-1.3
1,646,239	+				+0.0
1,646,240	-				+0.0
1,646,240	-				-0.2
1,646,240	-				+0.2
1,646,240	-				-2.6
1,646,243	+				-1.1
1,646,243	+				-1.2
1,646,243	+				+0.0
1,646,244	-				-2.9
1,646,244	-				-0.4
1,646,381	+		MPMX19_01570	0.23	+0.5
1,646,381	+		MPMX19_01570	0.23	-1.1
1,646,381	+		MPMX19_01570	0.23	-0.2
1,646,381	+		MPMX19_01570	0.23	-2.2
1,646,381	+		MPMX19_01570	0.23	+1.3
1,646,381	+		MPMX19_01570	0.23	+0.0
1,646,381	+		MPMX19_01570	0.23	-1.0
1,646,382	-		MPMX19_01570	0.24	-2.1
1,646,382	-		MPMX19_01570	0.24	-0.4
1,646,382	-		MPMX19_01570	0.24	-0.9
1,646,382	-		MPMX19_01570	0.24	-0.9
1,646,382	-		MPMX19_01570	0.24	-1.8
1,646,382	-		MPMX19_01570	0.24	-0.9
1,646,382	-		MPMX19_01570	0.24	-1.8
1,646,382	-		MPMX19_01570	0.24	-1.0
1,646,382	-		MPMX19_01570	0.24	-1.4
1,646,382	-		MPMX19_01570	0.24	+0.2
1,646,417	+		MPMX19_01570	0.30	-0.8
1,646,417	+		MPMX19_01570	0.30	-1.9
1,646,417	+		MPMX19_01570	0.30	-1.7
1,646,417	+		MPMX19_01570	0.30	+0.5
1,646,417	+		MPMX19_01570	0.30	-0.0
1,646,417	+		MPMX19_01570	0.30	-0.1
1,646,417	+		MPMX19_01570	0.30	-0.8
1,646,417	+		MPMX19_01570	0.30	-0.1
1,646,417	+		MPMX19_01570	0.30	+0.1
1,646,418	-		MPMX19_01570	0.30	-1.5
1,646,418	-		MPMX19_01570	0.30	+0.0
1,646,418	-		MPMX19_01570	0.30	-1.0
1,646,418	-		MPMX19_01570	0.30	-1.1
1,646,418	-		MPMX19_01570	0.30	-1.5
1,646,418	-		MPMX19_01570	0.30	-2.1
1,646,418	-		MPMX19_01570	0.30	+0.0
1,646,418	-		MPMX19_01570	0.30	-1.5
1,646,418	-		MPMX19_01570	0.30	-0.2
1,646,418	-		MPMX19_01570	0.30	-0.3
1,646,418	-		MPMX19_01570	0.30	-1.5
1,646,480	+		MPMX19_01570	0.42	+0.7
1,646,480	+		MPMX19_01570	0.42	+0.5
1,646,480	+		MPMX19_01570	0.42	-0.3
1,646,480	+		MPMX19_01570	0.42	+0.0
1,646,480	+		MPMX19_01570	0.42	-1.5
1,646,480	+		MPMX19_01570	0.42	+0.0
1,646,480	+		MPMX19_01570	0.42	-1.2
1,646,481	-		MPMX19_01570	0.42	-2.3
1,646,481	-		MPMX19_01570	0.42	+0.5
1,646,481	-		MPMX19_01570	0.42	-0.3
1,646,481	-		MPMX19_01570	0.42	+0.7
1,646,481	-		MPMX19_01570	0.42	+1.0
1,646,481	-		MPMX19_01570	0.42	-0.2
1,646,481	-		MPMX19_01570	0.42	+1.0
1,646,564	+		MPMX19_01570	0.57	+1.0
1,646,564	+		MPMX19_01570	0.57	-2.0
1,646,564	+		MPMX19_01570	0.57	-0.7
1,646,564	+		MPMX19_01570	0.57	+0.7
1,646,564	+		MPMX19_01570	0.57	-2.0
1,646,564	+		MPMX19_01570	0.57	-0.8
1,646,564	+		MPMX19_01570	0.57	+0.3
1,646,564	+		MPMX19_01570	0.57	-1.0
1,646,564	+		MPMX19_01570	0.57	+0.1
1,646,564	+		MPMX19_01570	0.57	+0.7
1,646,564	+		MPMX19_01570	0.57	-0.4
1,646,564	+		MPMX19_01570	0.57	-0.6
1,646,564	+		MPMX19_01570	0.57	+0.7
1,646,564	+		MPMX19_01570	0.57	+0.0
1,646,564	+		MPMX19_01570	0.57	-2.1
1,646,565	-		MPMX19_01570	0.57	+1.0
1,646,565	-		MPMX19_01570	0.57	-1.5
1,646,565	-		MPMX19_01570	0.57	+0.5
1,646,565	-		MPMX19_01570	0.57	-1.0
1,646,565	-		MPMX19_01570	0.57	-2.0
1,646,565	-		MPMX19_01570	0.57	+0.7
1,646,565	-		MPMX19_01570	0.57	-0.7
1,646,565	-		MPMX19_01570	0.57	+0.9
1,646,565	-		MPMX19_01570	0.57	+0.3
1,646,565	-		MPMX19_01570	0.57	-1.0
1,646,565	-		MPMX19_01570	0.57	-0.3
1,646,565	-		MPMX19_01570	0.57	-1.0
1,646,565	-		MPMX19_01570	0.57	+0.0
1,646,565	-		MPMX19_01570	0.57	-1.4
1,646,565	-		MPMX19_01570	0.57	-2.1
1,646,565	-		MPMX19_01570	0.57	+0.9
1,646,565	-		MPMX19_01570	0.57	-1.9
1,646,565	-		MPMX19_01570	0.57	-0.5
1,646,565	-		MPMX19_01570	0.57	-0.3
1,646,565	-		MPMX19_01570	0.57	-0.5
1,646,565	-		MPMX19_01570	0.57	-1.4
1,646,565	-		MPMX19_01570	0.57	-1.3
1,646,565	-		MPMX19_01570	0.57	-0.8
1,646,565	-		MPMX19_01570	0.57	-2.0
1,646,573	+		MPMX19_01570	0.59	-1.7
1,646,574	-		MPMX19_01570	0.59	-0.3
1,646,574	-		MPMX19_01570	0.59	-0.6
1,646,696	+		MPMX19_01570	0.81	+1.3
1,646,696	+		MPMX19_01570	0.81	-0.8
1,646,696	+		MPMX19_01570	0.81	-1.0
1,646,696	+		MPMX19_01570	0.81	-2.5
1,646,696	+		MPMX19_01570	0.81	+0.7
1,646,696	+		MPMX19_01570	0.81	-2.1
1,646,696	+		MPMX19_01570	0.81	-2.7
1,646,696	+		MPMX19_01570	0.81	+0.2
1,646,696	+		MPMX19_01570	0.81	-0.4
1,646,696	+		MPMX19_01570	0.81	+0.2
1,646,696	+		MPMX19_01570	0.81	+0.3
1,646,696	+		MPMX19_01570	0.81	-0.4
1,646,696	+		MPMX19_01570	0.81	-2.7
1,646,696	+		MPMX19_01570	0.81	+1.6
1,646,696	+		MPMX19_01570	0.81	+0.5
1,646,696	+		MPMX19_01570	0.81	-1.7
1,646,696	+		MPMX19_01570	0.81	+0.5
1,646,696	+		MPMX19_01570	0.81	-0.3
1,646,696	+		MPMX19_01570	0.81	+0.0
1,646,696	+		MPMX19_01570	0.81	+0.5
1,646,696	+		MPMX19_01570	0.81	+0.8
1,646,696	+		MPMX19_01570	0.81	-0.1
1,646,696	+		MPMX19_01570	0.81	-1.8
1,646,697	-		MPMX19_01570	0.82	-1.1
1,646,697	-		MPMX19_01570	0.82	-0.3
1,646,697	-		MPMX19_01570	0.82	+0.0
1,646,697	-		MPMX19_01570	0.82	+2.0
1,646,697	-		MPMX19_01570	0.82	-0.3
1,646,697	-		MPMX19_01570	0.82	+1.0
1,646,697	-		MPMX19_01570	0.82	+0.3
1,646,697	-		MPMX19_01570	0.82	-1.0
1,646,697	-		MPMX19_01570	0.82	+0.2
1,646,697	-		MPMX19_01570	0.82	+1.0
1,646,697	-		MPMX19_01570	0.82	-0.7
1,646,697	-		MPMX19_01570	0.82	-0.7
1,646,697	-		MPMX19_01570	0.82	+0.2
1,646,697	-		MPMX19_01570	0.82	-1.3
1,646,697	-		MPMX19_01570	0.82	+1.0
1,646,697	-		MPMX19_01570	0.82	-1.3
1,646,697	-		MPMX19_01570	0.82	+0.9
1,646,697	-		MPMX19_01570	0.82	-0.2
1,646,697	-		MPMX19_01570	0.82	-0.4
1,646,697	-		MPMX19_01570	0.82	-1.0
1,646,697	-		MPMX19_01570	0.82	-0.4
1,646,697	-		MPMX19_01570	0.82	-1.0
1,646,697	-		MPMX19_01570	0.82	-0.1
1,646,796	+				-0.7
1,646,796	+				-0.7
1,646,796	+				-1.1
1,646,797	-				-0.7
1,646,797	-				+0.6
1,646,797	-				-0.5
1,646,797	-				-0.5
1,646,797	-				-0.6
1,646,797	-				-0.8
1,646,797	-				-1.0
1,646,797	-				-0.3
1,646,797	-				-0.2
1,646,797	-				-0.3
1,646,800	+				-1.0
1,646,800	+				-1.3
1,646,800	+				-0.3
1,646,800	+				+0.2
1,646,800	+				-0.4
1,646,801	-				+0.0
1,646,801	-				+0.7
1,646,801	-				-0.8
1,646,801	-				-0.8
1,646,801	-				+0.0
1,646,808	+				-1.2
1,646,808	+				-2.2
1,646,808	+				+1.0
1,646,808	+				+0.0
1,646,808	+				-1.1
1,646,808	+				-0.9
1,646,808	+				-1.0
1,646,808	+				-0.4
1,646,809	-				-0.8
1,646,809	-				-0.1
1,646,809	-				+0.0
1,646,809	-				+0.5
1,646,809	-				+1.5
1,646,809	-				-0.2
1,646,809	-				-1.5
1,646,812	+				-0.7
1,646,812	+				-1.1
1,646,812	+				-2.3
1,646,812	+				-1.1
1,646,812	+				+1.6
1,646,813	-				-0.5
1,646,813	-				+1.0
1,646,813	-				+0.8
1,646,813	-				-0.5
1,646,813	-				+0.2
1,646,861	+				-0.8
1,646,861	+				-0.5
1,646,861	+				-1.0
1,647,395	+				+0.5
1,647,395	+				-1.7
1,647,395	+				+0.2
1,647,395	+				+0.2
1,647,395	+				+0.8
1,647,395	+				-0.8
1,647,396	-				-1.4
1,647,396	-				+0.5
1,647,396	-				-1.2
1,647,396	-				-1.0
1,647,396	-				-0.1
1,647,396	-				+0.8
1,647,396	-				-1.0
1,647,396	-				-1.1
1,647,396	-				+0.6
1,647,572	+		MPMX19_01572	0.31	+1.0
1,647,572	+		MPMX19_01572	0.31	+0.0
1,647,572	+		MPMX19_01572	0.31	-1.7
1,647,572	+		MPMX19_01572	0.31	-1.1
1,647,572	+		MPMX19_01572	0.31	+0.2
1,647,572	+		MPMX19_01572	0.31	+0.2
1,647,572	+		MPMX19_01572	0.31	-0.3
1,647,572	+		MPMX19_01572	0.31	-0.5
1,647,572	+		MPMX19_01572	0.31	-0.4
1,647,572	+		MPMX19_01572	0.31	+0.0
1,647,572	+		MPMX19_01572	0.31	+0.8
1,647,572	+		MPMX19_01572	0.31	-1.0
1,647,573	-		MPMX19_01572	0.31	-1.0
1,647,573	-		MPMX19_01572	0.31	-0.1
1,647,573	-		MPMX19_01572	0.31	-1.1
1,647,573	-		MPMX19_01572	0.31	+0.4
1,647,573	-		MPMX19_01572	0.31	-0.4
1,647,573	-		MPMX19_01572	0.31	-0.8
1,647,573	-		MPMX19_01572	0.31	-1.3
1,647,573	-		MPMX19_01572	0.31	-1.2
1,647,573	-		MPMX19_01572	0.31	+0.2
1,647,573	-		MPMX19_01572	0.31	-1.8
1,647,734	+		MPMX19_01572	0.69	-0.8
1,647,734	+		MPMX19_01572	0.69	-1.7
1,647,734	+		MPMX19_01572	0.69	-1.7
1,647,734	+		MPMX19_01572	0.69	-0.3
1,647,734	+		MPMX19_01572	0.69	-0.9
1,647,734	+		MPMX19_01572	0.69	-1.7
1,647,734	+		MPMX19_01572	0.69	+1.2
1,647,734	+		MPMX19_01572	0.69	-0.3
1,647,734	+		MPMX19_01572	0.69	-0.3
1,647,734	+		MPMX19_01572	0.69	-0.4
1,647,734	+		MPMX19_01572	0.69	+2.0
1,647,734	+		MPMX19_01572	0.69	-1.5
1,647,734	+		MPMX19_01572	0.69	-0.5
1,647,734	+		MPMX19_01572	0.69	+0.5
1,647,734	+		MPMX19_01572	0.69	-0.1
1,647,734	+		MPMX19_01572	0.69	+0.5
1,647,734	+		MPMX19_01572	0.69	-1.7
1,647,735	-		MPMX19_01572	0.69	-0.5
1,647,735	-		MPMX19_01572	0.69	-1.0
1,647,735	-		MPMX19_01572	0.69	+0.6
1,647,735	-		MPMX19_01572	0.69	+0.5
1,647,735	-		MPMX19_01572	0.69	-0.5
1,647,735	-		MPMX19_01572	0.69	-1.5
1,647,735	-		MPMX19_01572	0.69	-0.8
1,647,735	-		MPMX19_01572	0.69	+1.2
1,647,735	-		MPMX19_01572	0.69	+0.2
1,647,735	-		MPMX19_01572	0.69	-0.3
1,647,735	-		MPMX19_01572	0.69	-0.4
1,647,735	-		MPMX19_01572	0.69	-0.5
1,647,735	-		MPMX19_01572	0.69	+0.0
1,647,735	-		MPMX19_01572	0.69	-0.6
1,647,735	-		MPMX19_01572	0.69	-0.5
1,647,735	-		MPMX19_01572	0.69	+0.3