Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01523

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,596,249	+		MPMX19_01522	0.34	-2.1
1,596,249	+		MPMX19_01522	0.34	+1.9
1,596,249	+		MPMX19_01522	0.34	-1.8
1,596,250	-		MPMX19_01522	0.34	-0.9
1,596,250	-		MPMX19_01522	0.34	+0.3
1,596,250	-		MPMX19_01522	0.34	-3.0
1,596,250	-		MPMX19_01522	0.34	-1.3
1,596,250	-		MPMX19_01522	0.34	-2.1
1,596,278	-		MPMX19_01522	0.36	-0.1
1,596,278	-		MPMX19_01522	0.36	-2.2
1,596,278	-		MPMX19_01522	0.36	-1.6
1,596,278	-		MPMX19_01522	0.36	-2.0
1,596,278	-		MPMX19_01522	0.36	-0.4
1,596,309	+		MPMX19_01522	0.39	+0.9
1,596,309	+		MPMX19_01522	0.39	-0.2
1,596,309	+		MPMX19_01522	0.39	+0.3
1,596,310	-		MPMX19_01522	0.39	+0.6
1,596,310	-		MPMX19_01522	0.39	-0.6
1,596,310	-		MPMX19_01522	0.39	-0.1
1,596,310	-		MPMX19_01522	0.39	+0.0
1,596,334	-		MPMX19_01522	0.40	+0.9
1,596,402	+		MPMX19_01522	0.45	-0.3
1,596,402	+		MPMX19_01522	0.45	+0.6
1,596,402	+		MPMX19_01522	0.45	+0.0
1,596,402	+		MPMX19_01522	0.45	+0.2
1,596,402	+		MPMX19_01522	0.45	-0.3
1,596,402	+		MPMX19_01522	0.45	-0.4
1,596,402	+		MPMX19_01522	0.45	-1.9
1,596,402	+		MPMX19_01522	0.45	+0.2
1,596,402	+		MPMX19_01522	0.45	-0.5
1,596,402	+		MPMX19_01522	0.45	-1.8
1,596,403	-		MPMX19_01522	0.45	-0.3
1,596,403	-		MPMX19_01522	0.45	-1.4
1,596,403	-		MPMX19_01522	0.45	-0.6
1,596,403	-		MPMX19_01522	0.45	+0.0
1,596,403	-		MPMX19_01522	0.45	-1.0
1,596,403	-		MPMX19_01522	0.45	-0.6
1,596,403	-		MPMX19_01522	0.45	-0.6
1,596,403	-		MPMX19_01522	0.45	+0.0
1,596,403	-		MPMX19_01522	0.45	+0.0
1,596,403	-		MPMX19_01522	0.45	-2.2
1,596,403	-		MPMX19_01522	0.45	+1.2
1,596,403	-		MPMX19_01522	0.45	-1.7
1,597,090	-				+1.0
1,597,208	+				-0.1
1,597,209	-				-0.8
1,597,209	-				-0.8
1,597,268	+		MPMX19_01523	0.15	-0.6
1,597,268	+		MPMX19_01523	0.15	-0.3
1,597,268	+		MPMX19_01523	0.15	-0.8
1,597,268	+		MPMX19_01523	0.15	-0.4
1,597,268	+		MPMX19_01523	0.15	-1.0
1,597,269	-		MPMX19_01523	0.15	-0.3
1,597,269	-		MPMX19_01523	0.15	-3.0
1,597,269	-		MPMX19_01523	0.15	+0.6
1,597,269	-		MPMX19_01523	0.15	-2.0
1,597,269	-		MPMX19_01523	0.15	-1.4
1,597,269	-		MPMX19_01523	0.15	-1.2
1,597,269	-		MPMX19_01523	0.15	+0.0
1,597,269	-		MPMX19_01523	0.15	+0.7
1,597,269	-		MPMX19_01523	0.15	-1.3
1,597,269	-		MPMX19_01523	0.15	-1.9
1,597,493	+		MPMX19_01523	0.70	+1.0
1,597,493	+		MPMX19_01523	0.70	-0.6
1,597,494	-		MPMX19_01523	0.70	-1.7
1,597,494	-		MPMX19_01523	0.70	-0.1
1,597,494	-		MPMX19_01523	0.70	-0.4
1,597,575	+				+0.8
1,597,575	+				+0.6
1,597,575	+				-1.1
1,597,575	+				-0.3
1,597,575	+				+1.0
1,597,575	+				-0.1
1,597,575	+				-0.6
1,597,575	+				-0.9
1,597,575	+				-1.7
1,597,575	+				-1.2
1,597,575	+				-0.4
1,597,575	+				-1.0
1,597,575	+				-0.1
1,597,575	+				-1.4
1,597,575	+				-1.8
1,597,575	+				+1.0
1,597,576	-				-1.6
1,597,576	-				+0.7
1,597,576	-				-1.3
1,597,576	-				+0.2
1,597,576	-				-1.7
1,597,576	-				-0.8
1,597,576	-				+2.0
1,597,576	-				+1.5
1,597,576	-				+0.5
1,597,576	-				-1.1
1,597,576	-				+0.0
1,597,576	-				-1.7
1,597,576	-				-0.6
1,597,576	-				-1.6
1,597,748	+				-0.9
1,597,748	+				-2.9
1,597,749	-				-0.6
1,597,749	-				+0.8
1,597,749	-				-0.9
1,597,749	-				-2.3
1,597,749	-				-0.4
1,597,749	-				+0.2
1,597,750	+				-1.4
1,597,750	+				-0.9
1,597,750	+				-2.8
1,597,750	+				+0.0
1,597,750	+				-0.5
1,597,750	+				-0.3
1,597,750	+				-1.0
1,597,750	+				+0.2
1,597,750	+				-0.8
1,597,750	+				+0.4
1,597,751	-				-0.6
1,597,751	-				-1.4
1,597,751	-				-1.4
1,597,751	-				-0.8
1,597,751	-				-0.1
1,597,751	-				+0.7
1,597,765	+				-0.9
1,597,766	-				+0.3
1,597,766	-				+0.4
1,597,766	-				-1.1
1,597,779	+				-0.1
1,597,779	+				-0.8
1,597,779	+				-1.6
1,597,780	-				-2.0
1,597,780	-				-1.0
1,597,780	-				-0.6
1,597,780	-				-1.8
1,597,783	+				-0.2
1,597,783	+				-1.6
1,597,783	+				-1.9
1,597,783	+				-1.8
1,597,783	+				-0.6
1,597,783	+				-1.6
1,597,783	+				-1.1
1,597,783	+				+0.3
1,597,783	+				-0.7
1,597,783	+				-0.5
1,597,783	+				+0.9
1,597,783	+				-0.6
1,597,783	+				-2.7
1,597,783	+				-0.7
1,597,783	+				-1.0
1,597,783	+				+1.0
1,597,783	+				-1.0
1,597,783	+				-1.4
1,597,783	+				-0.0
1,597,784	-				-0.1
1,597,784	-				+0.0
1,597,784	-				+0.2
1,597,784	-				-1.4
1,597,784	-				-2.4
1,597,784	-				-1.6
1,597,784	-				-0.6
1,597,784	-				-0.8
1,597,784	-				+0.2
1,597,784	-				-2.3
1,597,784	-				-1.6
1,597,784	-				+0.0
1,597,784	-				-0.6
1,597,784	-				-0.2
1,597,975	+				-1.1
1,597,975	+				-0.3
1,597,975	+				-1.3
1,597,975	+				-0.1
1,597,975	+				-1.7
1,597,975	+				-0.1
1,597,975	+				-0.6
1,597,975	+				-0.8
1,597,975	+				-0.8
1,597,975	+				-1.5
1,597,975	+				-0.6
1,597,975	+				-0.1
1,597,975	+				+0.0
1,597,975	+				-0.9
1,597,975	+				+2.4
1,597,975	+				-1.3
1,597,975	+				-0.6
1,597,975	+				-0.9
1,597,975	+				-0.2
1,597,975	+				-0.9
1,597,975	+				+1.0
1,597,975	+				+2.0
1,597,975	+				-0.7
1,597,975	+				-0.2
1,597,975	+				-0.6
1,597,975	+				-0.5
1,597,975	+				+0.4
1,597,975	+				-2.0
1,597,975	+				-0.7
1,597,975	+				-1.6
1,597,975	+				+0.9
1,597,975	+				-1.8
1,597,975	+				-0.3
1,597,975	+				-0.2
1,597,975	+				-0.9
1,597,975	+				-1.0
1,597,975	+				-1.0
1,597,975	+				-1.8
1,597,975	+				-1.6
1,597,975	+				-1.0
1,597,976	-				+0.0
1,597,976	-				-1.4
1,597,976	-				-2.0
1,597,976	-				+0.4
1,597,976	-				-1.8
1,597,976	-				-1.3
1,597,976	-				-0.9
1,597,976	-				+1.2
1,597,976	-				-0.9
1,597,976	-				+0.4
1,597,976	-				+0.5
1,597,976	-				-1.4
1,597,976	-				-0.3
1,597,976	-				-0.7
1,597,976	-				-2.1
1,597,976	-				-0.3
1,597,976	-				-0.6
1,597,976	-				+0.3
1,597,976	-				+0.2
1,597,976	-				-1.7
1,597,976	-				-1.8
1,597,976	-				-1.7
1,597,976	-				+0.4
1,597,976	-				-0.3
1,597,976	-				-0.1
1,597,976	-				+1.2
1,597,976	-				-1.4
1,597,976	-				-0.8
1,597,976	-				-0.7
1,597,976	-				+0.9
1,597,976	-				-1.9
1,597,976	-				-2.2
1,597,976	-				-1.0
1,597,976	-				-0.8
1,597,976	-				-1.6
1,597,976	-				+0.4
1,597,976	-				-0.5
1,597,976	-				-1.1
1,597,976	-				-0.7
1,597,976	-				-1.4
1,597,976	-				+0.4
1,597,976	-				+0.6
1,597,976	-				+0.2
1,597,976	-				-0.8
1,597,976	-				-0.9
1,597,976	-				+0.2
1,597,976	-				+0.2
1,597,976	-				-0.8
1,597,976	-				-0.8
1,597,976	-				-0.7
1,597,976	-				-0.9
1,597,976	-				-1.8
1,598,029	+		MPMX19_01524	0.16	-1.0
1,598,029	+		MPMX19_01524	0.16	+0.9
1,598,030	-		MPMX19_01524	0.16	+0.6
1,598,030	-		MPMX19_01524	0.16	-2.1
1,598,245	+		MPMX19_01524	0.46	+0.4
1,598,245	+		MPMX19_01524	0.46	+0.4
1,598,245	+		MPMX19_01524	0.46	-0.0
1,598,245	+		MPMX19_01524	0.46	-1.9
1,598,245	+		MPMX19_01524	0.46	-0.1
1,598,245	+		MPMX19_01524	0.46	+0.5
1,598,245	+		MPMX19_01524	0.46	-0.3
1,598,245	+		MPMX19_01524	0.46	+0.4
1,598,245	+		MPMX19_01524	0.46	-0.6
1,598,245	+		MPMX19_01524	0.46	-0.7
1,598,245	+		MPMX19_01524	0.46	-0.6
1,598,245	+		MPMX19_01524	0.46	-0.3
1,598,245	+		MPMX19_01524	0.46	-0.9
1,598,245	+		MPMX19_01524	0.46	-1.2
1,598,246	-		MPMX19_01524	0.46	-2.0
1,598,246	-		MPMX19_01524	0.46	+1.3
1,598,246	-		MPMX19_01524	0.46	-0.9
1,598,246	-		MPMX19_01524	0.46	+0.0
1,598,246	-		MPMX19_01524	0.46	-2.0
1,598,246	-		MPMX19_01524	0.46	-0.2
1,598,246	-		MPMX19_01524	0.46	-1.0
1,598,246	-		MPMX19_01524	0.46	-0.9
1,598,374	+		MPMX19_01524	0.64	+0.9
1,598,374	+		MPMX19_01524	0.64	+1.4
1,598,374	+		MPMX19_01524	0.64	-1.3
1,598,374	+		MPMX19_01524	0.64	-0.9
1,598,374	+		MPMX19_01524	0.64	-0.6
1,598,374	+		MPMX19_01524	0.64	-1.6
1,598,374	+		MPMX19_01524	0.64	-2.9
1,598,375	-		MPMX19_01524	0.64	-0.2
1,598,375	-		MPMX19_01524	0.64	-1.3
1,598,375	-		MPMX19_01524	0.64	-0.1
1,598,375	-		MPMX19_01524	0.64	-1.8
1,598,375	-		MPMX19_01524	0.64	-0.0
1,598,375	-		MPMX19_01524	0.64	+0.0
1,598,375	-		MPMX19_01524	0.64	+1.4
1,598,375	-		MPMX19_01524	0.64	-0.4
1,598,375	-		MPMX19_01524	0.64	-1.1
1,598,375	-		MPMX19_01524	0.64	-0.9
1,598,375	-		MPMX19_01524	0.64	-1.1
1,598,375	-		MPMX19_01524	0.64	+0.0
1,598,375	-		MPMX19_01524	0.64	-1.1
1,598,375	-		MPMX19_01524	0.64	-1.9
1,598,375	-		MPMX19_01524	0.64	+0.2
1,598,375	-		MPMX19_01524	0.64	-0.4
1,598,434	+		MPMX19_01524	0.72	-0.5
1,598,434	+		MPMX19_01524	0.72	-1.1
1,598,434	+		MPMX19_01524	0.72	-1.1
1,598,465	+		MPMX19_01524	0.76	-0.6
1,598,465	+		MPMX19_01524	0.76	+0.4
1,598,465	+		MPMX19_01524	0.76	+1.0
1,598,465	+		MPMX19_01524	0.76	-1.6
1,598,465	+		MPMX19_01524	0.76	-0.6
1,598,465	+		MPMX19_01524	0.76	+1.2
1,598,466	-		MPMX19_01524	0.77	+0.6
1,598,466	-		MPMX19_01524	0.77	-0.1
1,598,466	-		MPMX19_01524	0.77	+0.2
1,598,466	-		MPMX19_01524	0.77	-0.3