Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01521

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,594,024	+		MPMX19_01520	0.78	+1.4
1,594,025	-		MPMX19_01520	0.78	-0.3
1,594,025	-		MPMX19_01520	0.78	-0.9
1,594,025	-		MPMX19_01520	0.78	+0.4
1,594,025	-		MPMX19_01520	0.78	+1.0
1,594,168	+		MPMX19_01520	0.82	-0.8
1,594,168	+		MPMX19_01520	0.82	+0.4
1,594,168	+		MPMX19_01520	0.82	+1.8
1,594,168	+		MPMX19_01520	0.82	-0.3
1,594,168	+		MPMX19_01520	0.82	-1.2
1,594,168	+		MPMX19_01520	0.82	-1.7
1,594,169	-		MPMX19_01520	0.82	+0.7
1,594,169	-		MPMX19_01520	0.82	+0.7
1,594,169	-		MPMX19_01520	0.82	+2.0
1,594,169	-		MPMX19_01520	0.82	+0.7
1,594,169	-		MPMX19_01520	0.82	-2.0
1,594,169	-		MPMX19_01520	0.82	+0.4
1,594,170	+		MPMX19_01520	0.82	-0.8
1,594,170	+		MPMX19_01520	0.82	+0.6
1,594,170	+		MPMX19_01520	0.82	-0.3
1,594,170	+		MPMX19_01520	0.82	+0.7
1,594,170	+		MPMX19_01520	0.82	-1.3
1,594,170	+		MPMX19_01520	0.82	+0.0
1,594,170	+		MPMX19_01520	0.82	-0.2
1,594,170	+		MPMX19_01520	0.82	+1.6
1,594,170	+		MPMX19_01520	0.82	+0.8
1,594,170	+		MPMX19_01520	0.82	+1.2
1,594,170	+		MPMX19_01520	0.82	-0.3
1,594,170	+		MPMX19_01520	0.82	+0.4
1,594,170	+		MPMX19_01520	0.82	-0.4
1,594,170	+		MPMX19_01520	0.82	-0.0
1,594,170	+		MPMX19_01520	0.82	+0.0
1,594,170	+		MPMX19_01520	0.82	+0.4
1,594,170	+		MPMX19_01520	0.82	+0.9
1,594,170	+		MPMX19_01520	0.82	-1.6
1,594,170	+		MPMX19_01520	0.82	-1.3
1,594,170	+		MPMX19_01520	0.82	+0.4
1,594,170	+		MPMX19_01520	0.82	-1.0
1,594,170	+		MPMX19_01520	0.82	+2.6
1,594,170	+		MPMX19_01520	0.82	-1.6
1,594,170	+		MPMX19_01520	0.82	+0.3
1,594,170	+		MPMX19_01520	0.82	-0.1
1,594,170	+		MPMX19_01520	0.82	+1.2
1,594,170	+		MPMX19_01520	0.82	-0.1
1,594,170	+		MPMX19_01520	0.82	-1.1
1,594,170	+		MPMX19_01520	0.82	-2.1
1,594,170	+		MPMX19_01520	0.82	-0.8
1,594,170	+		MPMX19_01520	0.82	-1.7
1,594,170	+		MPMX19_01520	0.82	-1.2
1,594,170	+		MPMX19_01520	0.82	+0.2
1,594,170	+		MPMX19_01520	0.82	-0.6
1,594,171	-		MPMX19_01520	0.82	+0.4
1,594,171	-		MPMX19_01520	0.82	-1.1
1,594,171	-		MPMX19_01520	0.82	+0.0
1,594,171	-		MPMX19_01520	0.82	-1.8
1,594,171	-		MPMX19_01520	0.82	+1.0
1,594,171	-		MPMX19_01520	0.82	+0.7
1,594,171	-		MPMX19_01520	0.82	-1.6
1,594,171	-		MPMX19_01520	0.82	+0.0
1,594,171	-		MPMX19_01520	0.82	-0.3
1,594,171	-		MPMX19_01520	0.82	-0.1
1,594,171	-		MPMX19_01520	0.82	-0.8
1,594,171	-		MPMX19_01520	0.82	+1.0
1,594,171	-		MPMX19_01520	0.82	+0.2
1,594,171	-		MPMX19_01520	0.82	+0.5
1,594,171	-		MPMX19_01520	0.82	-0.4
1,594,171	-		MPMX19_01520	0.82	-0.1
1,594,171	-		MPMX19_01520	0.82	-1.6
1,594,171	-		MPMX19_01520	0.82	-0.3
1,594,171	-		MPMX19_01520	0.82	+0.2
1,594,171	-		MPMX19_01520	0.82	+1.4
1,594,171	-		MPMX19_01520	0.82	-0.4
1,594,171	-		MPMX19_01520	0.82	-0.6
1,594,171	-		MPMX19_01520	0.82	-0.3
1,594,171	-		MPMX19_01520	0.82	+1.0
1,594,171	-		MPMX19_01520	0.82	+0.4
1,594,171	-		MPMX19_01520	0.82	+0.0
1,594,171	-		MPMX19_01520	0.82	-0.8
1,594,171	-		MPMX19_01520	0.82	+0.0
1,594,171	-		MPMX19_01520	0.82	-1.6
1,594,171	-		MPMX19_01520	0.82	-1.6
1,594,171	-		MPMX19_01520	0.82	-1.1
1,594,171	-		MPMX19_01520	0.82	+0.4
1,594,171	-		MPMX19_01520	0.82	-0.4
1,594,171	-		MPMX19_01520	0.82	-2.0
1,594,171	-		MPMX19_01520	0.82	-1.4
1,594,171	-		MPMX19_01520	0.82	-0.3
1,594,171	-		MPMX19_01520	0.82	-0.5
1,594,171	-		MPMX19_01520	0.82	-1.0
1,594,171	-		MPMX19_01520	0.82	-0.1
1,594,171	-		MPMX19_01520	0.82	+0.9
1,594,171	-		MPMX19_01520	0.82	-1.1
1,594,171	-		MPMX19_01520	0.82	-2.4
1,594,171	-		MPMX19_01520	0.82	+0.2
1,594,556	+				+1.2
1,594,556	+				-0.8
1,594,556	+				-1.3
1,594,556	+				+0.2
1,594,556	+				+1.0
1,594,556	+				-0.1
1,594,557	-				+0.2
1,594,557	-				-0.6
1,594,557	-				-0.7
1,594,557	-				-1.3
1,594,557	-				+0.2
1,594,870	+				-1.6
1,594,871	-				+0.4
1,594,871	-				+0.3
1,594,871	-				+0.2
1,594,871	-				-0.1
1,594,871	-				+0.4
1,594,872	+				-0.3
1,594,872	+				-0.1
1,594,872	+				+1.2
1,594,872	+				-0.6
1,594,872	+				-1.2
1,594,872	+				+0.7
1,594,872	+				-0.6
1,594,872	+				-1.2
1,594,872	+				+0.0
1,594,872	+				+0.4
1,594,872	+				-0.6
1,594,873	-				+0.6
1,594,873	-				+0.7
1,594,873	-				-0.2
1,594,873	-				-0.3
1,594,873	-				+0.4
1,594,873	-				+0.0
1,594,873	-				-0.4
1,594,873	-				-0.7
1,594,873	-				-0.6
1,594,873	-				+0.2
1,594,880	+				+0.3
1,594,880	+				-1.8
1,594,881	-				-1.0
1,594,881	-				-0.1
1,594,881	-				-1.2
1,594,907	+				+3.0
1,594,908	-				-1.1
1,594,908	-				-1.3
1,594,908	-				-1.0
1,594,908	-				-0.6
1,594,908	-				-1.3
1,594,962	+				-2.4
1,594,962	+				+0.3
1,594,962	+				+0.7
1,594,962	+				-0.8
1,594,962	+				-0.6
1,594,962	+				-0.8
1,594,962	+				+0.0
1,594,962	+				+0.7
1,594,962	+				-1.1
1,594,963	-				-0.7
1,594,963	-				+0.4
1,594,963	-				-1.3
1,594,963	-				-1.1
1,594,963	-				-0.7
1,595,001	+				-1.9
1,595,001	+				-0.5
1,595,001	+				+0.0
1,595,002	-				-1.3
1,595,002	-				-0.8
1,595,002	-				-0.4
1,595,002	-				-0.8
1,595,002	-				-0.7
1,595,002	-				-0.6
1,595,002	-				-0.7
1,595,002	-				+0.1
1,595,002	-				-0.2
1,595,388	+		MPMX19_01521	0.58	-1.4
1,595,388	+		MPMX19_01521	0.58	+0.3
1,595,388	+		MPMX19_01521	0.58	+0.3
1,595,388	+		MPMX19_01521	0.58	-1.0
1,595,388	+		MPMX19_01521	0.58	-0.9
1,595,389	-		MPMX19_01521	0.58	-1.4
1,595,389	-		MPMX19_01521	0.58	-0.3
1,595,389	-		MPMX19_01521	0.58	+0.2
1,595,389	-		MPMX19_01521	0.58	-0.3
1,595,389	-		MPMX19_01521	0.58	+1.0
1,595,592	+		MPMX19_01521	0.89	-1.9
1,595,592	+		MPMX19_01521	0.89	+0.9
1,595,592	+		MPMX19_01521	0.89	+2.4
1,595,592	+		MPMX19_01521	0.89	-1.6
1,595,592	+		MPMX19_01521	0.89	+0.6
1,595,593	-		MPMX19_01521	0.89	-0.7
1,595,593	-		MPMX19_01521	0.89	-0.2
1,595,593	-		MPMX19_01521	0.89	+0.0
1,595,593	-		MPMX19_01521	0.89	-1.6
1,595,593	-		MPMX19_01521	0.89	-0.2
1,595,593	-		MPMX19_01521	0.89	-0.4
1,595,593	-		MPMX19_01521	0.89	-1.1
1,595,593	-		MPMX19_01521	0.89	+2.0
1,595,593	-		MPMX19_01521	0.89	+0.1
1,595,593	-		MPMX19_01521	0.89	-0.1
1,595,593	-		MPMX19_01521	0.89	+0.6
1,595,593	-		MPMX19_01521	0.89	+0.0
1,595,838	+				-2.1
1,595,838	+				-1.1
1,595,838	+				-0.3
1,595,838	+				-0.8
1,595,838	+				-1.1
1,595,838	+				-0.2
1,595,838	+				-0.2
1,595,838	+				-1.3
1,595,838	+				-0.1
1,595,838	+				-0.5
1,595,838	+				-2.1
1,595,839	-				+0.8
1,595,839	-				+0.1
1,595,839	-				-1.1
1,595,839	-				-0.8
1,595,839	-				+0.0
1,595,839	-				-0.8
1,595,839	-				+1.0
1,595,839	-				-0.7
1,596,141	+		MPMX19_01522	0.27	-0.8
1,596,141	+		MPMX19_01522	0.27	+0.0
1,596,141	+		MPMX19_01522	0.27	-0.4
1,596,141	+		MPMX19_01522	0.27	+1.4
1,596,141	+		MPMX19_01522	0.27	-0.1
1,596,141	+		MPMX19_01522	0.27	-0.3
1,596,141	+		MPMX19_01522	0.27	-1.1
1,596,141	+		MPMX19_01522	0.27	-1.1
1,596,141	+		MPMX19_01522	0.27	+0.6
1,596,141	+		MPMX19_01522	0.27	+0.7
1,596,141	+		MPMX19_01522	0.27	+1.6
1,596,141	+		MPMX19_01522	0.27	-0.8
1,596,141	+		MPMX19_01522	0.27	-0.3
1,596,141	+		MPMX19_01522	0.27	-0.4
1,596,141	+		MPMX19_01522	0.27	+0.4
1,596,141	+		MPMX19_01522	0.27	-0.6
1,596,141	+		MPMX19_01522	0.27	+1.4
1,596,141	+		MPMX19_01522	0.27	-0.3
1,596,141	+		MPMX19_01522	0.27	+0.4
1,596,141	+		MPMX19_01522	0.27	-0.6
1,596,141	+		MPMX19_01522	0.27	-1.3
1,596,141	+		MPMX19_01522	0.27	-0.1
1,596,141	+		MPMX19_01522	0.27	-0.6
1,596,141	+		MPMX19_01522	0.27	-0.8
1,596,141	+		MPMX19_01522	0.27	-0.6
1,596,141	+		MPMX19_01522	0.27	-0.3
1,596,141	+		MPMX19_01522	0.27	+0.6
1,596,141	+		MPMX19_01522	0.27	-0.8
1,596,141	+		MPMX19_01522	0.27	-2.0
1,596,141	+		MPMX19_01522	0.27	-0.2
1,596,141	+		MPMX19_01522	0.27	-0.8
1,596,142	-		MPMX19_01522	0.27	-0.5
1,596,142	-		MPMX19_01522	0.27	+0.2
1,596,142	-		MPMX19_01522	0.27	-1.6
1,596,142	-		MPMX19_01522	0.27	-0.8
1,596,142	-		MPMX19_01522	0.27	-0.3
1,596,142	-		MPMX19_01522	0.27	+0.2
1,596,142	-		MPMX19_01522	0.27	+0.4
1,596,142	-		MPMX19_01522	0.27	-1.2
1,596,142	-		MPMX19_01522	0.27	+0.3
1,596,142	-		MPMX19_01522	0.27	+0.5
1,596,142	-		MPMX19_01522	0.27	-0.6
1,596,142	-		MPMX19_01522	0.27	+0.3
1,596,142	-		MPMX19_01522	0.27	-0.8
1,596,142	-		MPMX19_01522	0.27	-1.1
1,596,142	-		MPMX19_01522	0.27	-1.3
1,596,142	-		MPMX19_01522	0.27	-0.4
1,596,142	-		MPMX19_01522	0.27	-0.5
1,596,142	-		MPMX19_01522	0.27	+0.3
1,596,142	-		MPMX19_01522	0.27	-0.6
1,596,142	-		MPMX19_01522	0.27	-0.1
1,596,142	-		MPMX19_01522	0.27	+0.9
1,596,142	-		MPMX19_01522	0.27	-0.4
1,596,142	-		MPMX19_01522	0.27	-0.7
1,596,142	-		MPMX19_01522	0.27	-0.3
1,596,142	-		MPMX19_01522	0.27	+0.0
1,596,142	-		MPMX19_01522	0.27	-1.9
1,596,142	-		MPMX19_01522	0.27	-0.5
1,596,142	-		MPMX19_01522	0.27	+0.0
1,596,142	-		MPMX19_01522	0.27	+0.6
1,596,249	+		MPMX19_01522	0.34	-2.1
1,596,249	+		MPMX19_01522	0.34	+1.9
1,596,249	+		MPMX19_01522	0.34	-1.8
1,596,250	-		MPMX19_01522	0.34	-0.9
1,596,250	-		MPMX19_01522	0.34	+0.3
1,596,250	-		MPMX19_01522	0.34	-3.0
1,596,250	-		MPMX19_01522	0.34	-1.3
1,596,250	-		MPMX19_01522	0.34	-2.1
1,596,278	-		MPMX19_01522	0.36	-0.1
1,596,278	-		MPMX19_01522	0.36	-2.2
1,596,278	-		MPMX19_01522	0.36	-1.6
1,596,278	-		MPMX19_01522	0.36	-2.0
1,596,278	-		MPMX19_01522	0.36	-0.4
1,596,309	+		MPMX19_01522	0.39	+0.9
1,596,309	+		MPMX19_01522	0.39	-0.2
1,596,309	+		MPMX19_01522	0.39	+0.3
1,596,310	-		MPMX19_01522	0.39	+0.6
1,596,310	-		MPMX19_01522	0.39	-0.6
1,596,310	-		MPMX19_01522	0.39	-0.1
1,596,310	-		MPMX19_01522	0.39	+0.0
1,596,334	-		MPMX19_01522	0.40	+0.9
1,596,402	+		MPMX19_01522	0.45	-0.3
1,596,402	+		MPMX19_01522	0.45	+0.6
1,596,402	+		MPMX19_01522	0.45	+0.0
1,596,402	+		MPMX19_01522	0.45	+0.2
1,596,402	+		MPMX19_01522	0.45	-0.3
1,596,402	+		MPMX19_01522	0.45	-0.4
1,596,402	+		MPMX19_01522	0.45	-1.9
1,596,402	+		MPMX19_01522	0.45	+0.2
1,596,402	+		MPMX19_01522	0.45	-0.5
1,596,402	+		MPMX19_01522	0.45	-1.8
1,596,403	-		MPMX19_01522	0.45	-0.3
1,596,403	-		MPMX19_01522	0.45	-1.4
1,596,403	-		MPMX19_01522	0.45	-0.6
1,596,403	-		MPMX19_01522	0.45	+0.0
1,596,403	-		MPMX19_01522	0.45	-1.0
1,596,403	-		MPMX19_01522	0.45	-0.6
1,596,403	-		MPMX19_01522	0.45	-0.6
1,596,403	-		MPMX19_01522	0.45	+0.0
1,596,403	-		MPMX19_01522	0.45	+0.0
1,596,403	-		MPMX19_01522	0.45	-2.2
1,596,403	-		MPMX19_01522	0.45	+1.2
1,596,403	-		MPMX19_01522	0.45	-1.7