Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01491

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,562,952	+		MPMX19_01490	0.25	-1.4
1,563,103	+		MPMX19_01490	0.38	+2.0
1,563,104	-		MPMX19_01490	0.38	+0.5
1,563,152	+		MPMX19_01490	0.42	-0.8
1,563,152	+		MPMX19_01490	0.42	+0.5
1,563,152	+		MPMX19_01490	0.42	-0.8
1,563,152	+		MPMX19_01490	0.42	+0.0
1,563,152	+		MPMX19_01490	0.42	+1.7
1,563,152	+		MPMX19_01490	0.42	-2.1
1,563,152	+		MPMX19_01490	0.42	-0.9
1,563,152	+		MPMX19_01490	0.42	+0.1
1,563,152	+		MPMX19_01490	0.42	-1.0
1,563,152	+		MPMX19_01490	0.42	-1.0
1,563,152	+		MPMX19_01490	0.42	-0.7
1,563,153	-		MPMX19_01490	0.42	-0.4
1,563,153	-		MPMX19_01490	0.42	-1.9
1,563,153	-		MPMX19_01490	0.42	+1.0
1,563,153	-		MPMX19_01490	0.42	+0.0
1,563,153	-		MPMX19_01490	0.42	+0.6
1,563,180	+		MPMX19_01490	0.45	-0.8
1,563,180	+		MPMX19_01490	0.45	-1.0
1,563,239	+		MPMX19_01490	0.50	+0.3
1,563,295	-		MPMX19_01490	0.55	-1.2
1,563,338	+		MPMX19_01490	0.58	+0.3
1,563,338	+		MPMX19_01490	0.58	-0.2
1,563,339	-		MPMX19_01490	0.58	-0.4
1,563,450	-		MPMX19_01490	0.68	+0.2
1,563,450	-		MPMX19_01490	0.68	+0.2
1,563,450	-		MPMX19_01490	0.68	-0.6
1,563,608	+		MPMX19_01490	0.81	-0.0
1,563,608	+		MPMX19_01490	0.81	-0.6
1,563,608	+		MPMX19_01490	0.81	-1.0
1,563,608	+		MPMX19_01490	0.81	+1.6
1,563,608	+		MPMX19_01490	0.81	-1.2
1,563,608	+		MPMX19_01490	0.81	-2.8
1,563,608	+		MPMX19_01490	0.81	+0.0
1,563,609	-		MPMX19_01490	0.82	-1.7
1,563,609	-		MPMX19_01490	0.82	+0.1
1,563,609	-		MPMX19_01490	0.82	+0.0
1,563,609	-		MPMX19_01490	0.82	-0.4
1,563,609	-		MPMX19_01490	0.82	+0.5
1,563,623	-		MPMX19_01490	0.83	+2.0
1,563,690	-		MPMX19_01490	0.88	-0.3
1,563,821	+				-0.8
1,563,821	+				-1.4
1,563,821	+				-0.3
1,563,821	+				-0.6
1,563,822	-				-1.2
1,563,822	-				-0.1
1,563,822	-				+0.6
1,563,822	-				-1.2
1,563,822	-				-0.5
1,563,971	+		MPMX19_01491	0.84	-0.9
1,563,971	+		MPMX19_01491	0.84	-0.6
1,563,972	-		MPMX19_01491	0.85	-1.6
1,564,379	+		MPMX19_01492	0.29	-0.7
1,564,379	+		MPMX19_01492	0.29	-0.9
1,564,379	+		MPMX19_01492	0.29	-0.4
1,564,379	+		MPMX19_01492	0.29	-0.4
1,564,380	-		MPMX19_01492	0.29	+1.6
1,564,380	-		MPMX19_01492	0.29	+0.4
1,564,380	-		MPMX19_01492	0.29	-0.4
1,564,380	-		MPMX19_01492	0.29	-0.8
1,564,380	-		MPMX19_01492	0.29	-1.6
1,564,385	+		MPMX19_01492	0.30	+0.1
1,564,385	+		MPMX19_01492	0.30	-0.6
1,564,385	+		MPMX19_01492	0.30	-0.3
1,564,385	+		MPMX19_01492	0.30	-1.0
1,564,386	-		MPMX19_01492	0.30	-1.2
1,564,386	-		MPMX19_01492	0.30	-0.6
1,564,386	-		MPMX19_01492	0.30	-2.7
1,564,386	-		MPMX19_01492	0.30	-0.8
1,564,386	-		MPMX19_01492	0.30	+1.4
1,564,601	+		MPMX19_01492	0.82	+0.5
1,564,601	+		MPMX19_01492	0.82	-0.2
1,564,602	-		MPMX19_01492	0.82	-0.9
1,564,602	-		MPMX19_01492	0.82	-1.9
1,564,602	-		MPMX19_01492	0.82	+0.0
1,564,602	-		MPMX19_01492	0.82	-0.2
1,564,602	-		MPMX19_01492	0.82	-0.9
1,564,649	+				-0.9
1,564,649	+				+0.1
1,564,649	+				-2.3
1,564,649	+				-0.4
1,564,649	+				+1.0
1,564,649	+				-1.0
1,564,650	-				+0.8
1,564,650	-				-0.8
1,564,650	-				-2.0
1,564,650	-				-0.9
1,564,650	-				-1.2
1,564,650	-				+0.2
1,564,650	-				-0.1
1,564,650	-				-2.1
1,564,650	-				-1.0
1,564,722	+				-1.0
1,564,722	+				+0.7
1,564,722	+				-1.4
1,564,722	+				-0.4
1,564,722	+				-2.4
1,564,722	+				-1.7
1,564,722	+				-0.3
1,564,723	-				-1.4
1,564,723	-				-0.3
1,564,723	-				-0.3
1,564,723	-				-1.7
1,564,723	-				-0.4
1,564,724	+				-0.1
1,564,724	+				+2.0
1,564,724	+				-0.8
1,564,724	+				-1.7
1,564,724	+				-2.2
1,564,724	+				+0.4
1,564,724	+				-0.3
1,564,724	+				-0.6
1,564,724	+				+0.7
1,564,724	+				-0.3
1,564,725	-				+0.8
1,564,725	-				-1.2
1,564,725	-				-0.5
1,564,725	-				-1.1
1,564,725	-				-1.7
1,564,725	-				-0.5
1,564,725	-				+0.2
1,564,725	-				-0.8
1,564,725	-				+1.0
1,564,725	-				-1.1
1,564,725	-				-0.6
1,564,725	-				-1.1
1,564,725	-				+0.6
1,564,725	-				-0.7
1,564,725	-				-1.8
1,564,725	-				-0.5
1,564,725	-				-1.7
1,564,725	-				+0.1
1,564,934	+				+0.5
1,564,934	+				-1.2
1,564,934	+				-0.2
1,564,934	+				-0.6
1,564,935	-				+0.5
1,564,935	-				+0.7
1,564,935	-				+0.0
1,564,935	-				+0.1
1,564,935	-				-1.3
1,564,935	-				-0.6
1,564,935	-				+1.7