Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01489

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,561,312	+		MPMX19_01486	0.76	-3.1
1,561,312	+		MPMX19_01486	0.76	-0.9
1,561,312	+		MPMX19_01486	0.76	+0.0
1,561,312	+		MPMX19_01486	0.76	-1.7
1,561,312	+		MPMX19_01486	0.76	-1.8
1,561,313	-		MPMX19_01486	0.76	+0.0
1,561,313	-		MPMX19_01486	0.76	+0.4
1,561,313	-		MPMX19_01486	0.76	-1.4
1,561,313	-		MPMX19_01486	0.76	-1.0
1,561,313	-		MPMX19_01486	0.76	+0.0
1,561,313	-		MPMX19_01486	0.76	-1.0
1,561,313	-		MPMX19_01486	0.76	+0.4
1,561,313	-		MPMX19_01486	0.76	-1.1
1,561,313	-		MPMX19_01486	0.76	-1.6
1,561,313	-		MPMX19_01486	0.76	-0.3
1,561,313	-		MPMX19_01486	0.76	-2.3
1,561,384	+		MPMX19_01486	0.85	-0.2
1,561,384	+		MPMX19_01486	0.85	+0.1
1,561,384	+		MPMX19_01486	0.85	-2.2
1,561,384	+		MPMX19_01486	0.85	-0.3
1,561,384	+		MPMX19_01486	0.85	-1.9
1,561,385	-		MPMX19_01486	0.86	-1.4
1,561,385	-		MPMX19_01486	0.86	-0.8
1,561,385	-		MPMX19_01486	0.86	+0.1
1,561,385	-		MPMX19_01486	0.86	-0.9
1,561,414	+		MPMX19_01486	0.89	-1.5
1,561,414	+		MPMX19_01486	0.89	-0.7
1,561,414	+		MPMX19_01486	0.89	-1.1
1,561,415	-		MPMX19_01486	0.90	-1.2
1,561,415	-		MPMX19_01486	0.90	-1.3
1,561,415	-		MPMX19_01486	0.90	-1.3
1,561,415	-		MPMX19_01486	0.90	-1.1
1,561,415	-		MPMX19_01486	0.90	-2.4
1,561,415	-		MPMX19_01486	0.90	-1.9
1,561,471	+				-0.6
1,561,471	+				-1.2
1,561,471	+				-0.3
1,561,471	+				-0.3
1,561,471	+				-1.2
1,561,471	+				-0.1
1,561,471	+				-0.8
1,561,471	+				-0.2
1,561,472	-				-0.3
1,561,472	-				-1.4
1,561,472	-				-1.4
1,561,472	-				-2.4
1,561,472	-				+0.8
1,561,472	-				-0.3
1,561,472	-				-0.8
1,561,472	-				-0.6
1,561,472	-				+0.8
1,561,492	+				-0.9
1,561,492	+				+0.4
1,561,492	+				+0.8
1,561,492	+				-0.2
1,561,492	+				-0.8
1,561,492	+				-0.1
1,561,492	+				-0.5
1,561,492	+				+0.0
1,561,492	+				+0.4
1,561,492	+				-2.2
1,561,492	+				-1.0
1,561,493	-				-1.9
1,561,493	-				+0.4
1,561,493	-				+0.4
1,561,493	-				-0.2
1,561,493	-				-0.2
1,561,493	-				-0.5
1,561,493	-				-0.7
1,561,493	-				-1.4
1,561,493	-				+0.2
1,561,493	-				-0.2
1,561,493	-				-0.9
1,561,493	-				+0.6
1,561,508	-				+1.4
1,561,599	+				-0.8
1,561,804	+		MPMX19_01487	0.58	-0.4
1,561,804	+		MPMX19_01487	0.58	-2.5
1,561,804	+		MPMX19_01487	0.58	-0.8
1,561,804	+		MPMX19_01487	0.58	-0.4
1,561,804	+		MPMX19_01487	0.58	-1.6
1,561,804	+		MPMX19_01487	0.58	-0.8
1,561,804	+		MPMX19_01487	0.58	-0.8
1,561,805	-		MPMX19_01487	0.59	-1.2
1,561,805	-		MPMX19_01487	0.59	+0.7
1,561,805	-		MPMX19_01487	0.59	-1.6
1,561,932	+				-1.8
1,561,932	+				-0.2
1,561,932	+				-0.8
1,561,932	+				+0.0
1,561,932	+				-1.2
1,561,932	+				-0.4
1,561,932	+				+1.7
1,561,932	+				-1.4
1,561,932	+				-1.3
1,561,932	+				-1.0
1,561,932	+				-0.1
1,561,932	+				+0.3
1,561,932	+				+0.1
1,561,932	+				+0.2
1,561,932	+				-1.2
1,561,932	+				+0.4
1,561,932	+				-0.8
1,561,932	+				-0.6
1,561,933	-				-0.7
1,561,933	-				-1.1
1,561,933	-				-0.5
1,561,933	-				-0.6
1,561,933	-				-0.3
1,561,933	-				-0.1
1,561,933	-				+0.7
1,561,933	-				+0.2
1,561,933	-				+0.2
1,561,933	-				-1.2
1,561,933	-				-1.4
1,561,933	-				-1.9
1,561,933	-				-0.1
1,561,933	-				-0.7
1,561,933	-				-1.0
1,561,933	-				+0.2
1,561,933	-				-0.5
1,561,933	-				-1.1
1,561,933	-				-0.6
1,561,933	-				-2.0
1,561,933	-				-0.6
1,561,933	-				+0.1
1,561,933	-				+1.0
1,562,049	+				+0.6
1,562,049	+				+1.2
1,562,049	+				-0.2
1,562,050	-				-0.3
1,562,050	-				-2.1
1,562,050	-				-0.8
1,562,056	-				-0.1
1,562,056	-				-0.2
1,562,537	+				-0.2
1,562,537	+				+0.6
1,562,537	+				-0.5
1,562,537	+				-1.8
1,562,537	+				+0.8
1,562,537	+				-0.1
1,562,538	-				+0.1
1,562,538	-				-0.3
1,562,538	-				+0.2
1,562,538	-				-0.9
1,562,538	-				-0.8
1,562,538	-				+0.4
1,562,538	-				-0.3
1,562,576	+				-2.4
1,562,576	+				-0.4
1,562,576	+				-0.3
1,562,576	+				-1.0
1,562,576	+				+0.4
1,562,576	+				-0.4
1,562,576	+				+0.2
1,562,576	+				-0.6
1,562,576	+				+0.0
1,562,576	+				+0.4
1,562,576	+				+0.3
1,562,576	+				-1.2
1,562,576	+				-0.2
1,562,576	+				-1.2
1,562,576	+				+0.7
1,562,576	+				+0.8
1,562,576	+				-1.8
1,562,576	+				-0.3
1,562,576	+				+0.4
1,562,576	+				-0.6
1,562,576	+				-0.8
1,562,576	+				-2.7
1,562,576	+				+1.0
1,562,576	+				-0.4
1,562,576	+				-0.3
1,562,576	+				+1.2
1,562,576	+				+0.6
1,562,576	+				-0.4
1,562,576	+				-1.4
1,562,576	+				-1.7
1,562,576	+				-0.7
1,562,576	+				+0.3
1,562,576	+				-0.6
1,562,576	+				+0.4
1,562,576	+				-1.5
1,562,576	+				+0.1
1,562,576	+				-0.4
1,562,576	+				+0.4
1,562,576	+				+0.2
1,562,577	-				-2.1
1,562,577	-				-1.1
1,562,577	-				-0.2
1,562,577	-				-0.6
1,562,577	-				-1.3
1,562,577	-				-0.2
1,562,577	-				-1.4
1,562,577	-				+0.3
1,562,577	-				+0.7
1,562,577	-				-0.2
1,562,577	-				-1.1
1,562,577	-				-0.4
1,562,577	-				-0.6
1,562,577	-				-1.7
1,562,577	-				-1.0
1,562,577	-				-0.6
1,562,577	-				-1.3
1,562,577	-				-1.6
1,562,577	-				+0.4
1,562,577	-				-0.6
1,562,577	-				-0.4
1,562,577	-				-1.0
1,562,577	-				-1.6
1,562,577	-				-0.1
1,562,577	-				-1.5
1,562,577	-				-1.7
1,562,577	-				-2.0
1,562,577	-				-0.8
1,562,577	-				+0.3
1,562,577	-				+1.2
1,562,577	-				-1.3
1,562,577	-				+1.2
1,562,577	-				-1.1
1,562,577	-				-0.3
1,562,577	-				-0.5
1,562,577	-				-0.7
1,562,577	-				+0.0
1,562,577	-				-0.6
1,562,615	+				-0.7
1,562,615	+				-0.6
1,562,616	-				+0.3
1,562,622	+				+0.1
1,562,622	+				+0.6
1,562,623	-				+1.7
1,562,623	-				+1.4
1,562,693	+				-0.6
1,562,693	+				-0.8
1,562,693	+				-1.5
1,562,693	+				-1.8
1,562,693	+				-0.1
1,562,693	+				-0.3
1,562,693	+				-0.6
1,562,693	+				-1.0
1,562,693	+				-1.6
1,562,693	+				-1.0
1,562,693	+				-1.8
1,562,693	+				-1.0
1,562,693	+				-1.3
1,562,694	-				+0.2
1,562,694	-				-0.1
1,562,694	-				-0.9
1,562,694	-				-0.4
1,562,694	-				+1.0
1,562,694	-				-1.4
1,562,694	-				-1.1
1,562,694	-				+0.7
1,562,694	-				-1.3
1,562,694	-				-2.7
1,562,694	-				+0.2
1,562,694	-				+0.7
1,562,694	-				-1.0
1,562,694	-				-0.6
1,562,700	-				-1.3
1,562,700	-				-0.2
1,562,705	-				-1.0
1,562,705	-				-0.3
1,562,952	+		MPMX19_01490	0.25	-1.4
1,563,103	+		MPMX19_01490	0.38	+2.0
1,563,104	-		MPMX19_01490	0.38	+0.5
1,563,152	+		MPMX19_01490	0.42	-0.8
1,563,152	+		MPMX19_01490	0.42	+0.5
1,563,152	+		MPMX19_01490	0.42	-0.8
1,563,152	+		MPMX19_01490	0.42	+0.0
1,563,152	+		MPMX19_01490	0.42	+1.7
1,563,152	+		MPMX19_01490	0.42	-2.1
1,563,152	+		MPMX19_01490	0.42	-0.9
1,563,152	+		MPMX19_01490	0.42	+0.1
1,563,152	+		MPMX19_01490	0.42	-1.0
1,563,152	+		MPMX19_01490	0.42	-1.0
1,563,152	+		MPMX19_01490	0.42	-0.7
1,563,153	-		MPMX19_01490	0.42	-0.4
1,563,153	-		MPMX19_01490	0.42	-1.9
1,563,153	-		MPMX19_01490	0.42	+1.0
1,563,153	-		MPMX19_01490	0.42	+0.0
1,563,153	-		MPMX19_01490	0.42	+0.6
1,563,180	+		MPMX19_01490	0.45	-0.8
1,563,180	+		MPMX19_01490	0.45	-1.0
1,563,239	+		MPMX19_01490	0.50	+0.3
1,563,295	-		MPMX19_01490	0.55	-1.2
1,563,338	+		MPMX19_01490	0.58	+0.3
1,563,338	+		MPMX19_01490	0.58	-0.2
1,563,339	-		MPMX19_01490	0.58	-0.4