Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01477

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,550,570	+		MPMX19_01476	0.73	+0.0
1,550,570	+		MPMX19_01476	0.73	+0.6
1,550,750	+		MPMX19_01476	0.80	-0.3
1,550,750	+		MPMX19_01476	0.80	+0.4
1,550,750	+		MPMX19_01476	0.80	+0.6
1,550,750	+		MPMX19_01476	0.80	+0.0
1,550,751	-		MPMX19_01476	0.80	+0.4
1,550,751	-		MPMX19_01476	0.80	-0.5
1,550,751	-		MPMX19_01476	0.80	+0.4
1,550,751	-		MPMX19_01476	0.80	-0.6
1,550,751	-		MPMX19_01476	0.80	+0.1
1,550,751	-		MPMX19_01476	0.80	-0.8
1,550,751	-		MPMX19_01476	0.80	+0.2
1,550,751	-		MPMX19_01476	0.80	-0.9
1,550,751	-		MPMX19_01476	0.80	-0.6
1,550,751	-		MPMX19_01476	0.80	-0.6
1,550,751	-		MPMX19_01476	0.80	+0.6
1,550,751	-		MPMX19_01476	0.80	+0.0
1,550,753	+		MPMX19_01476	0.80	-1.6
1,550,753	+		MPMX19_01476	0.80	-1.0
1,550,753	+		MPMX19_01476	0.80	-0.7
1,550,753	+		MPMX19_01476	0.80	-0.3
1,550,753	+		MPMX19_01476	0.80	-0.2
1,550,753	+		MPMX19_01476	0.80	-2.2
1,550,753	+		MPMX19_01476	0.80	-1.2
1,550,754	-		MPMX19_01476	0.80	-2.2
1,550,754	-		MPMX19_01476	0.80	-1.2
1,550,754	-		MPMX19_01476	0.80	-2.3
1,550,754	-		MPMX19_01476	0.80	-0.4
1,550,754	-		MPMX19_01476	0.80	-1.0
1,550,754	-		MPMX19_01476	0.80	-1.0
1,550,754	-		MPMX19_01476	0.80	+1.0
1,550,783	+		MPMX19_01476	0.81	-0.1
1,550,783	+		MPMX19_01476	0.81	-0.5
1,550,783	+		MPMX19_01476	0.81	-0.7
1,550,783	+		MPMX19_01476	0.81	-0.8
1,550,783	+		MPMX19_01476	0.81	+0.0
1,550,783	+		MPMX19_01476	0.81	-0.5
1,550,783	+		MPMX19_01476	0.81	-2.2
1,550,783	+		MPMX19_01476	0.81	-0.7
1,550,784	-		MPMX19_01476	0.81	+1.3
1,550,784	-		MPMX19_01476	0.81	-0.4
1,550,784	-		MPMX19_01476	0.81	-1.6
1,550,784	-		MPMX19_01476	0.81	+0.4
1,550,784	-		MPMX19_01476	0.81	-1.3
1,550,784	-		MPMX19_01476	0.81	-0.9
1,550,784	-		MPMX19_01476	0.81	-1.3
1,550,819	+		MPMX19_01476	0.83	-0.8
1,550,819	+		MPMX19_01476	0.83	+1.0
1,550,819	+		MPMX19_01476	0.83	-0.8
1,550,819	+		MPMX19_01476	0.83	-1.8
1,550,819	+		MPMX19_01476	0.83	+0.6
1,550,819	+		MPMX19_01476	0.83	+0.0
1,550,819	+		MPMX19_01476	0.83	-1.9
1,550,819	+		MPMX19_01476	0.83	-1.3
1,550,820	-		MPMX19_01476	0.83	-0.6
1,550,820	-		MPMX19_01476	0.83	+0.7
1,550,820	-		MPMX19_01476	0.83	-1.6
1,550,820	-		MPMX19_01476	0.83	-0.3
1,550,820	-		MPMX19_01476	0.83	+0.4
1,550,820	-		MPMX19_01476	0.83	-0.1
1,550,820	-		MPMX19_01476	0.83	-1.4
1,550,820	-		MPMX19_01476	0.83	-0.4
1,550,820	-		MPMX19_01476	0.83	+0.8
1,550,820	-		MPMX19_01476	0.83	-0.3
1,551,167	+				-1.3
1,551,167	+				-0.6
1,551,167	+				-0.4
1,551,167	+				-0.4
1,551,167	+				-1.9
1,551,167	+				-0.8
1,551,167	+				+0.0
1,551,167	+				-1.8
1,551,167	+				+0.2
1,551,167	+				+0.2
1,551,168	-				+1.0
1,551,168	-				+0.3
1,551,168	-				-0.6
1,551,168	-				-1.0
1,551,168	-				+0.2
1,551,168	-				+0.2
1,551,168	-				-1.3
1,551,168	-				+1.4
1,551,168	-				-0.3
1,551,233	+				+1.0
1,551,233	+				-0.3
1,551,233	+				-1.2
1,551,233	+				-0.7
1,551,233	+				-0.9
1,551,233	+				-1.0
1,551,233	+				-1.2
1,551,234	-				+0.0
1,551,234	-				-0.6
1,551,234	-				-0.2
1,551,322	+				-0.7
1,551,322	+				-1.6
1,551,322	+				+0.8
1,551,322	+				-0.8
1,551,322	+				-0.8
1,551,323	-				+0.6
1,551,323	-				+0.8
1,551,323	-				-1.2
1,551,323	-				-1.2
1,551,323	-				-1.8
1,551,323	-				+0.1
1,551,323	-				+0.6
1,551,347	+				+1.6
1,551,347	+				+0.1
1,551,347	+				-0.2
1,551,347	+				+0.9
1,551,347	+				+0.3
1,551,347	+				-2.3
1,551,347	+				-1.1
1,551,347	+				+2.4
1,551,347	+				+0.4
1,551,347	+				+0.8
1,551,347	+				-0.8
1,551,347	+				-0.9
1,551,347	+				-0.1
1,551,348	-				-0.3
1,551,348	-				+0.2
1,551,348	-				+0.4
1,551,348	-				-1.0
1,551,348	-				-0.3
1,551,348	-				+0.1
1,551,348	-				-0.7
1,551,348	-				-0.1
1,551,348	-				-1.7
1,551,369	-				-0.6
1,551,408	+				-0.7
1,551,408	+				-1.0
1,551,409	-				-1.7
1,551,409	-				+0.4
1,551,410	+				-0.7
1,551,410	+				-1.2
1,551,410	+				-0.2
1,551,410	+				-1.5
1,551,410	+				-0.2
1,551,410	+				+1.0
1,551,410	+				-1.2
1,551,411	-				-2.2
1,551,411	-				-1.2
1,551,411	-				-1.7
1,551,411	-				-0.7
1,551,413	+				-0.9
1,551,413	+				-0.4
1,551,413	+				-0.6
1,551,413	+				-0.8
1,551,413	+				+0.6
1,551,413	+				-0.4
1,551,413	+				+0.6
1,551,413	+				-0.3
1,551,413	+				-0.3
1,551,413	+				-1.9
1,551,414	-				-1.4
1,551,414	-				-0.5
1,551,414	-				+0.1
1,551,414	-				-1.8
1,551,414	-				-0.3
1,551,414	-				+0.4
1,551,414	-				-1.2
1,551,414	-				+0.0
1,551,414	-				-1.0
1,551,414	-				-0.8
1,551,414	-				-0.6
1,551,414	-				-1.2
1,551,414	-				-1.2
1,551,414	-				-2.0
1,551,414	-				-0.1
1,551,419	-				-1.6
1,551,677	+		MPMX19_01477	0.32	-0.8
1,551,677	+		MPMX19_01477	0.32	-1.0
1,551,677	+		MPMX19_01477	0.32	-1.1
1,551,677	+		MPMX19_01477	0.32	-1.7
1,551,677	+		MPMX19_01477	0.32	-1.7
1,551,678	-		MPMX19_01477	0.32	-2.3
1,551,678	-		MPMX19_01477	0.32	-0.4
1,551,678	-		MPMX19_01477	0.32	-0.9
1,551,678	-		MPMX19_01477	0.32	+0.0
1,551,839	+		MPMX19_01477	0.54	-1.4
1,551,839	+		MPMX19_01477	0.54	+0.0
1,551,839	+		MPMX19_01477	0.54	+0.7
1,551,839	+		MPMX19_01477	0.54	-0.2
1,551,839	+		MPMX19_01477	0.54	+1.3
1,551,839	+		MPMX19_01477	0.54	+0.4
1,551,839	+		MPMX19_01477	0.54	-1.4
1,551,839	+		MPMX19_01477	0.54	-1.8
1,551,839	+		MPMX19_01477	0.54	-3.4
1,551,839	+		MPMX19_01477	0.54	-0.6
1,551,839	+		MPMX19_01477	0.54	-0.5
1,551,839	+		MPMX19_01477	0.54	-0.1
1,551,839	+		MPMX19_01477	0.54	-1.1
1,551,839	+		MPMX19_01477	0.54	+0.4
1,551,839	+		MPMX19_01477	0.54	-1.0
1,551,839	+		MPMX19_01477	0.54	-1.0
1,551,839	+		MPMX19_01477	0.54	+0.6
1,551,839	+		MPMX19_01477	0.54	-0.1
1,551,839	+		MPMX19_01477	0.54	+0.2
1,551,839	+		MPMX19_01477	0.54	+0.3
1,551,839	+		MPMX19_01477	0.54	+0.7
1,551,839	+		MPMX19_01477	0.54	-0.1
1,551,839	+		MPMX19_01477	0.54	-1.0
1,551,839	+		MPMX19_01477	0.54	-2.2
1,551,839	+		MPMX19_01477	0.54	-1.3
1,551,840	-		MPMX19_01477	0.54	-1.0
1,551,840	-		MPMX19_01477	0.54	-1.8
1,551,840	-		MPMX19_01477	0.54	-1.2
1,551,840	-		MPMX19_01477	0.54	-1.7
1,551,840	-		MPMX19_01477	0.54	-0.9
1,551,840	-		MPMX19_01477	0.54	-1.1
1,551,840	-		MPMX19_01477	0.54	-0.2
1,551,840	-		MPMX19_01477	0.54	-1.6
1,551,840	-		MPMX19_01477	0.54	-1.4
1,551,840	-		MPMX19_01477	0.54	-1.2
1,551,840	-		MPMX19_01477	0.54	+0.7
1,551,840	-		MPMX19_01477	0.54	-1.9
1,551,840	-		MPMX19_01477	0.54	-1.2
1,551,840	-		MPMX19_01477	0.54	-0.6
1,551,840	-		MPMX19_01477	0.54	-1.8
1,551,840	-		MPMX19_01477	0.54	+0.6
1,551,840	-		MPMX19_01477	0.54	-2.7
1,551,840	-		MPMX19_01477	0.54	+0.1
1,551,840	-		MPMX19_01477	0.54	-0.4
1,551,840	-		MPMX19_01477	0.54	-0.9
1,551,840	-		MPMX19_01477	0.54	-0.4
1,551,840	-		MPMX19_01477	0.54	-0.1
1,551,840	-		MPMX19_01477	0.54	-0.9
1,551,840	-		MPMX19_01477	0.54	+0.2
1,551,840	-		MPMX19_01477	0.54	-1.0
1,551,840	-		MPMX19_01477	0.54	-0.3
1,551,840	-		MPMX19_01477	0.54	+1.0
1,551,840	-		MPMX19_01477	0.54	-0.8
1,551,840	-		MPMX19_01477	0.54	-1.2
1,551,840	-		MPMX19_01477	0.54	-1.2
1,551,840	-		MPMX19_01477	0.54	+1.5
1,551,840	-		MPMX19_01477	0.54	-1.0
1,551,840	-		MPMX19_01477	0.54	-1.8
1,551,840	-		MPMX19_01477	0.54	-0.2
1,551,840	-		MPMX19_01477	0.54	-0.4
1,551,840	-		MPMX19_01477	0.54	+0.6
1,551,840	-		MPMX19_01477	0.54	+0.4
1,551,840	-		MPMX19_01477	0.54	-1.1
1,551,923	+		MPMX19_01477	0.66	-1.4
1,551,923	+		MPMX19_01477	0.66	-0.6
1,551,923	+		MPMX19_01477	0.66	+0.8
1,551,923	+		MPMX19_01477	0.66	-0.8
1,551,923	+		MPMX19_01477	0.66	-0.7
1,551,923	+		MPMX19_01477	0.66	-0.4
1,551,924	-		MPMX19_01477	0.66	-1.0
1,551,924	-		MPMX19_01477	0.66	+0.0
1,551,924	-		MPMX19_01477	0.66	-0.6
1,551,932	+		MPMX19_01477	0.67	+0.2
1,551,932	+		MPMX19_01477	0.67	-1.8
1,551,932	+		MPMX19_01477	0.67	+0.3
1,551,932	+		MPMX19_01477	0.67	-0.7
1,551,932	+		MPMX19_01477	0.67	-1.0
1,551,932	+		MPMX19_01477	0.67	-0.3
1,551,932	+		MPMX19_01477	0.67	-0.6
1,551,932	+		MPMX19_01477	0.67	-2.1
1,551,932	+		MPMX19_01477	0.67	-0.8
1,551,932	+		MPMX19_01477	0.67	-1.2
1,551,932	+		MPMX19_01477	0.67	+0.6
1,551,932	+		MPMX19_01477	0.67	-1.2
1,551,932	+		MPMX19_01477	0.67	-0.5
1,551,932	+		MPMX19_01477	0.67	-0.2
1,551,932	+		MPMX19_01477	0.67	+2.3
1,551,932	+		MPMX19_01477	0.67	-1.5
1,551,933	-		MPMX19_01477	0.67	+0.1
1,551,933	-		MPMX19_01477	0.67	+1.0
1,551,933	-		MPMX19_01477	0.67	-0.2
1,551,933	-		MPMX19_01477	0.67	-0.8
1,551,933	-		MPMX19_01477	0.67	+0.3
1,551,933	-		MPMX19_01477	0.67	+0.3
1,551,933	-		MPMX19_01477	0.67	-1.3
1,551,933	-		MPMX19_01477	0.67	-1.4
1,551,933	-		MPMX19_01477	0.67	-0.4
1,551,933	-		MPMX19_01477	0.67	-0.2
1,551,933	-		MPMX19_01477	0.67	-0.8
1,551,933	-		MPMX19_01477	0.67	-0.2
1,551,933	-		MPMX19_01477	0.67	+0.4
1,551,933	-		MPMX19_01477	0.67	+0.1
1,551,933	-		MPMX19_01477	0.67	+0.4
1,551,933	-		MPMX19_01477	0.67	-0.7
1,551,933	-		MPMX19_01477	0.67	-0.8
1,552,178	+				+0.1
1,552,178	+				-0.6
1,552,178	+				+0.2