Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01433

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,498,435	+		MPMX19_01432	0.86	-0.2
1,498,435	+		MPMX19_01432	0.86	+0.1
1,498,435	+		MPMX19_01432	0.86	-0.6
1,498,435	+		MPMX19_01432	0.86	-0.4
1,498,435	+		MPMX19_01432	0.86	+0.8
1,498,435	+		MPMX19_01432	0.86	-1.8
1,498,435	+		MPMX19_01432	0.86	-0.8
1,498,435	+		MPMX19_01432	0.86	-1.3
1,498,435	+		MPMX19_01432	0.86	-0.2
1,498,435	+		MPMX19_01432	0.86	+2.0
1,498,436	-		MPMX19_01432	0.86	+1.0
1,498,436	-		MPMX19_01432	0.86	-1.7
1,498,436	-		MPMX19_01432	0.86	+0.7
1,498,436	-		MPMX19_01432	0.86	-2.2
1,498,436	-		MPMX19_01432	0.86	-1.0
1,498,436	-		MPMX19_01432	0.86	-0.3
1,498,436	-		MPMX19_01432	0.86	-0.9
1,498,436	-		MPMX19_01432	0.86	+0.2
1,498,436	-		MPMX19_01432	0.86	-1.8
1,498,436	-		MPMX19_01432	0.86	+1.0
1,498,436	-		MPMX19_01432	0.86	-0.9
1,498,436	-		MPMX19_01432	0.86	-0.1
1,498,447	+		MPMX19_01432	0.86	-2.4
1,498,447	+		MPMX19_01432	0.86	-1.1
1,498,447	+		MPMX19_01432	0.86	-0.7
1,498,447	+		MPMX19_01432	0.86	+1.0
1,498,447	+		MPMX19_01432	0.86	+0.6
1,498,447	+		MPMX19_01432	0.86	+0.0
1,498,447	+		MPMX19_01432	0.86	+0.3
1,498,447	+		MPMX19_01432	0.86	-0.4
1,498,447	+		MPMX19_01432	0.86	-0.5
1,498,447	+		MPMX19_01432	0.86	-2.7
1,498,447	+		MPMX19_01432	0.86	-0.7
1,498,448	-		MPMX19_01432	0.86	-0.7
1,498,448	-		MPMX19_01432	0.86	-1.0
1,498,448	-		MPMX19_01432	0.86	-1.4
1,498,448	-		MPMX19_01432	0.86	+0.8
1,498,448	-		MPMX19_01432	0.86	-0.9
1,498,448	-		MPMX19_01432	0.86	+1.3
1,498,448	-		MPMX19_01432	0.86	-1.3
1,498,448	-		MPMX19_01432	0.86	-0.4
1,498,448	-		MPMX19_01432	0.86	+0.0
1,498,448	-		MPMX19_01432	0.86	-0.9
1,498,448	-		MPMX19_01432	0.86	+0.0
1,498,448	-		MPMX19_01432	0.86	-0.1
1,498,465	+		MPMX19_01432	0.87	-1.2
1,498,465	+		MPMX19_01432	0.87	+1.8
1,498,465	+		MPMX19_01432	0.87	-0.2
1,498,465	+		MPMX19_01432	0.87	-1.0
1,498,465	+		MPMX19_01432	0.87	-2.6
1,498,465	+		MPMX19_01432	0.87	+0.6
1,498,466	-		MPMX19_01432	0.87	-2.0
1,498,466	-		MPMX19_01432	0.87	-0.9
1,498,466	-		MPMX19_01432	0.87	+0.0
1,498,466	-		MPMX19_01432	0.87	-1.1
1,498,717	+				+0.0
1,498,717	+				-1.1
1,498,717	+				-1.1
1,498,717	+				+1.5
1,498,717	+				-1.6
1,498,717	+				+0.5
1,498,717	+				-0.9
1,498,717	+				-0.4
1,498,717	+				-0.6
1,498,717	+				-0.1
1,498,718	-				-1.6
1,498,718	-				-1.1
1,498,718	-				-2.1
1,498,718	-				+0.8
1,498,718	-				-0.6
1,498,718	-				-0.6
1,499,171	-				-1.2
1,499,255	+				-1.1
1,499,255	+				-1.1
1,499,255	+				-0.9
1,499,255	+				-1.0
1,499,255	+				+0.1
1,499,255	+				+0.9
1,499,256	-				-2.1
1,499,256	-				-0.8
1,499,256	-				-0.8
1,499,256	-				-0.6
1,499,338	-				+0.0
1,499,352	-				-0.3
1,499,408	-				-1.1
1,499,583	+		MPMX19_01433	0.11	-1.8
1,499,583	+		MPMX19_01433	0.11	-0.6
1,499,583	+		MPMX19_01433	0.11	-1.7
1,499,583	+		MPMX19_01433	0.11	-1.1
1,499,583	+		MPMX19_01433	0.11	+1.9
1,499,583	+		MPMX19_01433	0.11	-0.1
1,499,583	+		MPMX19_01433	0.11	-1.9
1,499,584	-		MPMX19_01433	0.11	-0.7
1,499,584	-		MPMX19_01433	0.11	-0.6
1,499,584	-		MPMX19_01433	0.11	+0.6
1,499,584	-		MPMX19_01433	0.11	+0.8
1,499,584	-		MPMX19_01433	0.11	+0.2
1,499,584	-		MPMX19_01433	0.11	-1.2
1,499,584	-		MPMX19_01433	0.11	-1.5
1,499,584	-		MPMX19_01433	0.11	-0.7
1,499,584	-		MPMX19_01433	0.11	-0.4
1,499,584	-		MPMX19_01433	0.11	-1.0
1,499,584	-		MPMX19_01433	0.11	-0.3
1,499,584	-		MPMX19_01433	0.11	+0.9
1,499,613	+		MPMX19_01433	0.13	-1.0
1,499,613	+		MPMX19_01433	0.13	+0.2
1,499,613	+		MPMX19_01433	0.13	-0.1
1,499,613	+		MPMX19_01433	0.13	-0.9
1,499,613	+		MPMX19_01433	0.13	+0.1
1,499,613	+		MPMX19_01433	0.13	+2.0
1,499,613	+		MPMX19_01433	0.13	+0.6
1,499,613	+		MPMX19_01433	0.13	+0.2
1,499,613	+		MPMX19_01433	0.13	-0.4
1,499,614	-		MPMX19_01433	0.13	+1.2
1,499,614	-		MPMX19_01433	0.13	-0.6
1,499,614	-		MPMX19_01433	0.13	+0.4
1,499,614	-		MPMX19_01433	0.13	-1.3
1,499,614	-		MPMX19_01433	0.13	-0.6
1,499,614	-		MPMX19_01433	0.13	+1.0
1,499,614	-		MPMX19_01433	0.13	-0.9
1,499,749	+		MPMX19_01433	0.21	-1.3
1,499,749	+		MPMX19_01433	0.21	-1.3
1,499,749	+		MPMX19_01433	0.21	-2.4
1,499,749	+		MPMX19_01433	0.21	-0.6
1,499,749	+		MPMX19_01433	0.21	-1.1
1,499,749	+		MPMX19_01433	0.21	+0.8
1,499,750	-		MPMX19_01433	0.21	-0.6
1,499,750	-		MPMX19_01433	0.21	-0.3
1,499,750	-		MPMX19_01433	0.21	+0.4
1,500,026	-		MPMX19_01433	0.37	-0.9
1,500,383	+		MPMX19_01433	0.58	-0.6
1,500,383	+		MPMX19_01433	0.58	+1.4
1,500,383	+		MPMX19_01433	0.58	-1.0
1,500,383	+		MPMX19_01433	0.58	-1.1
1,500,384	-		MPMX19_01433	0.59	-0.9
1,500,384	-		MPMX19_01433	0.59	-0.6
1,500,384	-		MPMX19_01433	0.59	-0.3
1,500,384	-		MPMX19_01433	0.59	-0.7
1,501,138	-				+0.3
1,501,206	+				+0.3
1,501,206	+				-1.6
1,501,206	+				+0.4
1,501,206	+				-0.2
1,501,206	+				-1.0
1,501,206	+				-0.3
1,501,206	+				-0.3
1,501,206	+				-2.1
1,501,207	-				-0.5
1,501,207	-				-1.5
1,501,207	-				-0.3
1,501,235	+				+0.3
1,501,235	+				+0.0
1,501,235	+				-0.2
1,501,235	+				-2.1
1,501,235	+				+0.3
1,501,235	+				+0.2
1,501,235	+				-0.3
1,501,236	-				-0.3
1,501,236	-				-0.2
1,501,249	+				-1.4
1,501,249	+				-1.1
1,501,250	-				-1.4
1,501,250	-				-0.1
1,501,250	-				+0.0
1,501,250	-				+0.9
1,501,311	+				+0.1
1,501,311	+				-0.7
1,501,311	+				-3.0
1,501,311	+				+0.7
1,501,311	+				-1.9
1,501,311	+				+0.0
1,501,312	-				-0.6
1,501,312	-				-0.9
1,501,312	-				-0.3
1,501,312	-				-0.1
1,501,312	-				-1.8
1,501,312	-				-1.0
1,501,312	-				-2.4
1,501,312	-				-1.0
1,501,312	-				-0.1
1,501,312	-				+0.2
1,501,312	-				-1.0
1,501,327	+				+0.4
1,501,327	+				+0.4
1,501,341	-				-1.1
1,501,344	+				-1.1
1,501,381	+				+0.0
1,501,382	-				-0.8
1,501,482	+				+1.0
1,501,496	+				-1.6
1,501,497	-				-1.8
1,501,556	+				-1.1
1,501,563	+				-0.6
1,501,563	+				-1.1
1,501,563	+				+0.8
1,501,563	+				-0.4
1,501,563	+				+0.2
1,501,563	+				+2.0
1,501,563	+				-0.7
1,501,563	+				-1.9
1,501,563	+				-0.3
1,501,563	+				+0.3
1,501,563	+				-1.6
1,501,564	-				-1.6
1,501,564	-				+0.4
1,501,564	-				-1.6
1,501,564	-				-0.1
1,501,564	-				-1.4
1,501,564	-				-0.8
1,501,564	-				-1.2
1,501,564	-				-0.3
1,501,564	-				-0.2
1,501,564	-				+0.0
1,501,564	-				-0.7
1,501,564	-				-1.0
1,501,564	-				+0.2
1,501,564	-				+0.5
1,501,564	-				-1.5
1,501,564	-				-1.1
1,501,564	-				-0.8
1,501,590	+				+0.0
1,501,590	+				+0.7
1,501,590	+				-1.1
1,501,591	-				-1.6
1,501,677	+		MPMX19_01434	0.15	-1.8
1,501,677	+		MPMX19_01434	0.15	+0.0
1,501,678	-		MPMX19_01434	0.15	-0.3
1,501,678	-		MPMX19_01434	0.15	-0.1
1,501,678	-		MPMX19_01434	0.15	-2.4
1,501,743	+		MPMX19_01434	0.19	-0.1
1,501,743	+		MPMX19_01434	0.19	-0.8
1,501,743	+		MPMX19_01434	0.19	-0.2
1,501,743	+		MPMX19_01434	0.19	-1.2
1,501,743	+		MPMX19_01434	0.19	-1.0
1,501,743	+		MPMX19_01434	0.19	-0.5
1,501,743	+		MPMX19_01434	0.19	+0.5
1,501,743	+		MPMX19_01434	0.19	-0.6
1,501,743	+		MPMX19_01434	0.19	-2.9
1,501,743	+		MPMX19_01434	0.19	-0.7
1,501,743	+		MPMX19_01434	0.19	-0.2
1,501,743	+		MPMX19_01434	0.19	+0.0
1,501,743	+		MPMX19_01434	0.19	-2.6
1,501,744	-		MPMX19_01434	0.19	+1.3
1,501,744	-		MPMX19_01434	0.19	-1.3
1,501,744	-		MPMX19_01434	0.19	-1.1
1,501,744	-		MPMX19_01434	0.19	+1.0
1,501,744	-		MPMX19_01434	0.19	-1.2
1,501,744	-		MPMX19_01434	0.19	-0.7
1,501,744	-		MPMX19_01434	0.19	+0.1
1,501,744	-		MPMX19_01434	0.19	-2.1
1,501,744	-		MPMX19_01434	0.19	-2.3
1,501,744	-		MPMX19_01434	0.19	-0.7
1,501,744	-		MPMX19_01434	0.19	+0.5
1,501,744	-		MPMX19_01434	0.19	+0.6
1,501,744	-		MPMX19_01434	0.19	-0.6
1,501,754	-		MPMX19_01434	0.19	+0.2
1,501,919	+		MPMX19_01434	0.30	+0.1