Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01361

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,414,888	+		MPMX19_01360	0.50	+0.7
1,414,888	+		MPMX19_01360	0.50	-1.2
1,414,888	+		MPMX19_01360	0.50	+1.0
1,414,888	+		MPMX19_01360	0.50	+0.2
1,414,888	+		MPMX19_01360	0.50	-0.3
1,414,888	+		MPMX19_01360	0.50	-1.0
1,414,888	+		MPMX19_01360	0.50	-1.2
1,414,888	+		MPMX19_01360	0.50	+0.2
1,414,888	+		MPMX19_01360	0.50	-0.2
1,414,888	+		MPMX19_01360	0.50	+0.1
1,414,888	+		MPMX19_01360	0.50	-0.6
1,414,888	+		MPMX19_01360	0.50	-1.8
1,414,888	+		MPMX19_01360	0.50	+0.1
1,414,889	-		MPMX19_01360	0.51	+0.1
1,414,889	-		MPMX19_01360	0.51	-0.8
1,414,889	-		MPMX19_01360	0.51	-0.4
1,414,889	-		MPMX19_01360	0.51	-0.6
1,414,889	-		MPMX19_01360	0.51	-0.8
1,414,889	-		MPMX19_01360	0.51	+0.0
1,414,889	-		MPMX19_01360	0.51	-1.2
1,414,889	-		MPMX19_01360	0.51	+0.3
1,414,889	-		MPMX19_01360	0.51	-1.2
1,414,889	-		MPMX19_01360	0.51	-0.4
1,414,889	-		MPMX19_01360	0.51	-0.6
1,414,889	-		MPMX19_01360	0.51	+0.4
1,414,889	-		MPMX19_01360	0.51	-0.3
1,414,889	-		MPMX19_01360	0.51	-1.3
1,414,889	-		MPMX19_01360	0.51	+0.7
1,414,898	-		MPMX19_01360	0.51	-0.2
1,414,898	-		MPMX19_01360	0.51	-0.2
1,414,930	+		MPMX19_01360	0.53	-0.7
1,414,930	+		MPMX19_01360	0.53	-1.1
1,414,930	+		MPMX19_01360	0.53	+0.7
1,414,930	+		MPMX19_01360	0.53	+1.4
1,414,930	+		MPMX19_01360	0.53	-1.2
1,414,930	+		MPMX19_01360	0.53	+1.0
1,414,931	-		MPMX19_01360	0.53	+1.2
1,414,931	-		MPMX19_01360	0.53	-0.8
1,414,931	-		MPMX19_01360	0.53	+0.0
1,414,931	-		MPMX19_01360	0.53	+0.6
1,414,931	-		MPMX19_01360	0.53	-0.5
1,415,069	-		MPMX19_01360	0.60	-1.3
1,415,069	-		MPMX19_01360	0.60	-0.6
1,415,069	-		MPMX19_01360	0.60	-2.0
1,415,069	-		MPMX19_01360	0.60	-0.7
1,415,069	-		MPMX19_01360	0.60	-1.2
1,415,316	+		MPMX19_01360	0.72	-0.2
1,415,395	+		MPMX19_01360	0.76	-1.2
1,415,395	+		MPMX19_01360	0.76	-0.2
1,415,395	+		MPMX19_01360	0.76	-0.6
1,415,395	+		MPMX19_01360	0.76	+1.4
1,415,395	+		MPMX19_01360	0.76	+0.1
1,415,395	+		MPMX19_01360	0.76	-1.4
1,415,395	+		MPMX19_01360	0.76	+0.6
1,415,395	+		MPMX19_01360	0.76	-2.2
1,415,395	+		MPMX19_01360	0.76	+0.5
1,415,395	+		MPMX19_01360	0.76	-0.4
1,415,395	+		MPMX19_01360	0.76	+0.5
1,415,395	+		MPMX19_01360	0.76	-0.2
1,415,395	+		MPMX19_01360	0.76	+0.6
1,415,395	+		MPMX19_01360	0.76	+0.0
1,415,396	-		MPMX19_01360	0.76	-0.2
1,415,396	-		MPMX19_01360	0.76	+1.6
1,415,396	-		MPMX19_01360	0.76	-0.2
1,415,396	-		MPMX19_01360	0.76	-0.3
1,415,396	-		MPMX19_01360	0.76	-1.0
1,415,396	-		MPMX19_01360	0.76	+1.3
1,415,396	-		MPMX19_01360	0.76	-1.3
1,415,396	-		MPMX19_01360	0.76	-0.5
1,415,396	-		MPMX19_01360	0.76	-1.6
1,415,396	-		MPMX19_01360	0.76	-1.0
1,415,396	-		MPMX19_01360	0.76	-1.0
1,415,396	-		MPMX19_01360	0.76	+0.5
1,415,396	-		MPMX19_01360	0.76	-1.6
1,415,396	-		MPMX19_01360	0.76	-0.1
1,415,396	-		MPMX19_01360	0.76	+0.1
1,415,396	-		MPMX19_01360	0.76	+1.2
1,415,396	-		MPMX19_01360	0.76	-0.3
1,415,396	-		MPMX19_01360	0.76	-0.6
1,415,407	+		MPMX19_01360	0.77	-1.9
1,415,407	+		MPMX19_01360	0.77	-1.0
1,415,407	+		MPMX19_01360	0.77	-0.9
1,415,408	-		MPMX19_01360	0.77	-1.0
1,415,408	-		MPMX19_01360	0.77	-0.3
1,415,408	-		MPMX19_01360	0.77	+0.5
1,415,408	-		MPMX19_01360	0.77	-2.1
1,415,589	+		MPMX19_01360	0.86	-0.1
1,415,590	-		MPMX19_01360	0.86	+0.5
1,415,590	-		MPMX19_01360	0.86	-0.3
1,415,590	-		MPMX19_01360	0.86	-1.5
1,415,590	-		MPMX19_01360	0.86	+0.0
1,415,590	-		MPMX19_01360	0.86	+0.0
1,415,590	-		MPMX19_01360	0.86	+0.4
1,415,594	+		MPMX19_01360	0.87	+0.6
1,415,594	+		MPMX19_01360	0.87	+0.6
1,415,594	+		MPMX19_01360	0.87	+1.0
1,415,594	+		MPMX19_01360	0.87	-0.1
1,415,594	+		MPMX19_01360	0.87	-0.3
1,415,594	+		MPMX19_01360	0.87	-1.9
1,415,594	+		MPMX19_01360	0.87	-0.8
1,415,594	+		MPMX19_01360	0.87	+0.4
1,415,594	+		MPMX19_01360	0.87	-0.9
1,415,594	+		MPMX19_01360	0.87	-1.0
1,415,594	+		MPMX19_01360	0.87	-0.1
1,415,594	+		MPMX19_01360	0.87	+0.0
1,415,594	+		MPMX19_01360	0.87	-0.6
1,415,594	+		MPMX19_01360	0.87	-1.8
1,415,594	+		MPMX19_01360	0.87	-0.5
1,415,594	+		MPMX19_01360	0.87	-2.2
1,415,595	-		MPMX19_01360	0.87	-1.0
1,415,595	-		MPMX19_01360	0.87	-2.3
1,415,595	-		MPMX19_01360	0.87	-1.0
1,415,595	-		MPMX19_01360	0.87	-2.6
1,415,595	-		MPMX19_01360	0.87	-1.6
1,415,595	-		MPMX19_01360	0.87	+1.3
1,415,595	-		MPMX19_01360	0.87	-0.2
1,415,595	-		MPMX19_01360	0.87	-0.9
1,415,595	-		MPMX19_01360	0.87	-0.4
1,415,595	-		MPMX19_01360	0.87	-1.3
1,415,595	-		MPMX19_01360	0.87	+1.0
1,415,595	-		MPMX19_01360	0.87	-0.4
1,415,595	-		MPMX19_01360	0.87	-0.5
1,415,595	-		MPMX19_01360	0.87	-2.2
1,415,595	-		MPMX19_01360	0.87	+0.4
1,415,595	-		MPMX19_01360	0.87	-0.7
1,415,595	-		MPMX19_01360	0.87	-2.0
1,415,595	-		MPMX19_01360	0.87	-0.3
1,415,595	-		MPMX19_01360	0.87	+0.8
1,415,595	-		MPMX19_01360	0.87	+0.3
1,415,595	-		MPMX19_01360	0.87	-2.3
1,415,595	-		MPMX19_01360	0.87	-0.4
1,415,595	-		MPMX19_01360	0.87	+0.0
1,415,633	+		MPMX19_01360	0.89	+1.8
1,415,633	+		MPMX19_01360	0.89	-0.9
1,415,633	+		MPMX19_01360	0.89	-1.5
1,415,633	+		MPMX19_01360	0.89	-0.4
1,415,633	+		MPMX19_01360	0.89	-1.2
1,415,633	+		MPMX19_01360	0.89	+0.6
1,415,633	+		MPMX19_01360	0.89	-1.1
1,415,633	+		MPMX19_01360	0.89	+0.6
1,415,633	+		MPMX19_01360	0.89	-1.0
1,415,633	+		MPMX19_01360	0.89	+0.2
1,415,633	+		MPMX19_01360	0.89	+0.7
1,415,633	+		MPMX19_01360	0.89	-0.7
1,415,633	+		MPMX19_01360	0.89	-1.6
1,415,633	+		MPMX19_01360	0.89	+0.3
1,415,633	+		MPMX19_01360	0.89	-0.5
1,415,633	+		MPMX19_01360	0.89	-0.7
1,415,633	+		MPMX19_01360	0.89	+0.4
1,415,633	+		MPMX19_01360	0.89	+0.3
1,415,633	+		MPMX19_01360	0.89	-0.4
1,415,633	+		MPMX19_01360	0.89	+0.8
1,415,633	+		MPMX19_01360	0.89	-0.8
1,415,633	+		MPMX19_01360	0.89	-0.7
1,415,634	-		MPMX19_01360	0.89	-0.9
1,415,634	-		MPMX19_01360	0.89	-0.6
1,415,634	-		MPMX19_01360	0.89	-1.5
1,415,634	-		MPMX19_01360	0.89	+0.4
1,415,634	-		MPMX19_01360	0.89	+0.6
1,415,634	-		MPMX19_01360	0.89	+0.3
1,415,634	-		MPMX19_01360	0.89	-0.6
1,415,746	+				+0.9
1,415,746	+				-0.7
1,415,746	+				-0.8
1,415,746	+				-0.6
1,415,746	+				-1.2
1,415,746	+				-1.2
1,415,746	+				-0.7
1,415,746	+				+0.1
1,415,746	+				+0.1
1,415,746	+				-1.8
1,415,747	-				-0.9
1,415,747	-				-0.8
1,415,747	-				-0.9
1,415,747	-				+0.0
1,415,747	-				-0.8
1,415,747	-				-0.7
1,416,196	+		MPMX19_01361	0.12	-0.6
1,416,196	+		MPMX19_01361	0.12	-0.3
1,416,196	+		MPMX19_01361	0.12	-0.3
1,416,196	+		MPMX19_01361	0.12	-0.3
1,416,196	+		MPMX19_01361	0.12	+0.4
1,416,196	+		MPMX19_01361	0.12	+1.0
1,416,196	+		MPMX19_01361	0.12	-0.6
1,416,196	+		MPMX19_01361	0.12	-2.2
1,416,197	-		MPMX19_01361	0.13	-0.2
1,416,197	-		MPMX19_01361	0.13	+0.4
1,416,197	-		MPMX19_01361	0.13	-0.8
1,416,197	-		MPMX19_01361	0.13	-1.4
1,416,342	+		MPMX19_01361	0.18	-0.5
1,416,342	+		MPMX19_01361	0.18	-0.6
1,416,342	+		MPMX19_01361	0.18	+1.6
1,416,343	-		MPMX19_01361	0.18	+0.4
1,416,343	-		MPMX19_01361	0.18	-0.6
1,416,599	+		MPMX19_01361	0.28	-0.8
1,416,599	+		MPMX19_01361	0.28	-1.2
1,416,599	+		MPMX19_01361	0.28	+0.1
1,416,600	-		MPMX19_01361	0.28	-1.4
1,416,601	+		MPMX19_01361	0.28	-0.3
1,416,601	+		MPMX19_01361	0.28	-0.4
1,416,601	+		MPMX19_01361	0.28	-0.2
1,416,601	+		MPMX19_01361	0.28	+0.9
1,416,601	+		MPMX19_01361	0.28	+1.0
1,416,601	+		MPMX19_01361	0.28	-0.2
1,416,601	+		MPMX19_01361	0.28	+1.3
1,416,602	-		MPMX19_01361	0.29	+1.1
1,416,602	-		MPMX19_01361	0.29	-0.1
1,416,602	-		MPMX19_01361	0.29	-1.0
1,416,602	-		MPMX19_01361	0.29	-1.0
1,416,602	-		MPMX19_01361	0.29	+0.0
1,416,602	-		MPMX19_01361	0.29	-0.3
1,417,336	+		MPMX19_01361	0.58	+0.0
1,417,336	+		MPMX19_01361	0.58	+2.0
1,417,336	+		MPMX19_01361	0.58	+0.4
1,417,336	+		MPMX19_01361	0.58	+0.8
1,417,336	+		MPMX19_01361	0.58	+1.5
1,417,336	+		MPMX19_01361	0.58	-0.5
1,417,336	+		MPMX19_01361	0.58	-1.3
1,417,336	+		MPMX19_01361	0.58	+0.4
1,417,336	+		MPMX19_01361	0.58	-0.8
1,417,336	+		MPMX19_01361	0.58	-0.2
1,417,336	+		MPMX19_01361	0.58	-1.6
1,417,336	+		MPMX19_01361	0.58	-0.6
1,417,336	+		MPMX19_01361	0.58	-1.2
1,417,336	+		MPMX19_01361	0.58	+1.8
1,417,336	+		MPMX19_01361	0.58	-1.2
1,417,337	-		MPMX19_01361	0.58	+0.6
1,417,337	-		MPMX19_01361	0.58	-1.2
1,417,337	-		MPMX19_01361	0.58	-1.7
1,417,337	-		MPMX19_01361	0.58	-0.3
1,417,337	-		MPMX19_01361	0.58	-0.9
1,417,337	-		MPMX19_01361	0.58	-0.2
1,417,337	-		MPMX19_01361	0.58	-0.5
1,417,337	-		MPMX19_01361	0.58	-0.4
1,417,362	-		MPMX19_01361	0.59	-1.0
1,417,514	+		MPMX19_01361	0.65	-1.2
1,417,515	-		MPMX19_01361	0.65	-0.3
1,417,515	-		MPMX19_01361	0.65	-0.3
1,417,516	+		MPMX19_01361	0.65	+0.4
1,417,516	+		MPMX19_01361	0.65	-1.8
1,417,516	+		MPMX19_01361	0.65	+0.2
1,417,516	+		MPMX19_01361	0.65	-0.2
1,417,516	+		MPMX19_01361	0.65	-1.0
1,417,516	+		MPMX19_01361	0.65	+0.0
1,417,516	+		MPMX19_01361	0.65	+0.6
1,417,516	+		MPMX19_01361	0.65	-0.1
1,417,516	+		MPMX19_01361	0.65	-1.6
1,417,516	+		MPMX19_01361	0.65	-0.6
1,417,516	+		MPMX19_01361	0.65	+0.8
1,417,516	+		MPMX19_01361	0.65	-0.9
1,417,516	+		MPMX19_01361	0.65	-0.3
1,417,516	+		MPMX19_01361	0.65	-0.5
1,417,516	+		MPMX19_01361	0.65	+0.7
1,417,516	+		MPMX19_01361	0.65	-0.8
1,417,516	+		MPMX19_01361	0.65	-1.2
1,417,516	+		MPMX19_01361	0.65	-0.3
1,417,516	+		MPMX19_01361	0.65	-0.1
1,417,516	+		MPMX19_01361	0.65	-0.2
1,417,516	+		MPMX19_01361	0.65	+1.2
1,417,516	+		MPMX19_01361	0.65	-0.6
1,417,516	+		MPMX19_01361	0.65	-1.8
1,417,516	+		MPMX19_01361	0.65	+0.4
1,417,516	+		MPMX19_01361	0.65	+0.0
1,417,516	+		MPMX19_01361	0.65	+0.0
1,417,516	+		MPMX19_01361	0.65	-1.0
1,417,516	+		MPMX19_01361	0.65	-0.6
1,417,516	+		MPMX19_01361	0.65	-0.6
1,417,517	-		MPMX19_01361	0.65	-1.6
1,417,517	-		MPMX19_01361	0.65	-0.3
1,417,517	-		MPMX19_01361	0.65	-0.9
1,417,517	-		MPMX19_01361	0.65	+0.2
1,417,517	-		MPMX19_01361	0.65	+0.4
1,417,517	-		MPMX19_01361	0.65	-0.8
1,417,517	-		MPMX19_01361	0.65	+1.0
1,417,517	-		MPMX19_01361	0.65	-0.4
1,417,517	-		MPMX19_01361	0.65	+0.2
1,417,517	-		MPMX19_01361	0.65	-1.1
1,417,517	-		MPMX19_01361	0.65	-0.6
1,417,517	-		MPMX19_01361	0.65	-1.3
1,417,517	-		MPMX19_01361	0.65	-0.7
1,417,517	-		MPMX19_01361	0.65	+0.0
1,417,517	-		MPMX19_01361	0.65	-1.4
1,417,517	-		MPMX19_01361	0.65	+0.0
1,417,517	-		MPMX19_01361	0.65	-0.3
1,417,517	-		MPMX19_01361	0.65	+0.8
1,417,517	-		MPMX19_01361	0.65	-0.8
1,417,517	-		MPMX19_01361	0.65	-0.9
1,417,517	-		MPMX19_01361	0.65	-0.4
1,417,517	-		MPMX19_01361	0.65	+1.0
1,417,517	-		MPMX19_01361	0.65	-0.0
1,417,517	-		MPMX19_01361	0.65	-0.4
1,417,517	-		MPMX19_01361	0.65	-1.2
1,417,517	-		MPMX19_01361	0.65	+0.8
1,417,517	-		MPMX19_01361	0.65	+0.4
1,417,517	-		MPMX19_01361	0.65	-0.4
1,417,517	-		MPMX19_01361	0.65	+0.0
1,417,517	-		MPMX19_01361	0.65	-0.2
1,417,517	-		MPMX19_01361	0.65	-1.5
1,417,588	+		MPMX19_01361	0.67	+0.0
1,417,807	+		MPMX19_01361	0.76	+0.3
1,417,808	-		MPMX19_01361	0.76	+0.4
1,417,808	-		MPMX19_01361	0.76	+1.5
1,417,810	+		MPMX19_01361	0.76	+0.2
1,417,811	-		MPMX19_01361	0.76	-1.9
1,417,811	-		MPMX19_01361	0.76	-1.7
1,417,927	+		MPMX19_01361	0.81	+0.4
1,417,927	+		MPMX19_01361	0.81	-1.6
1,417,927	+		MPMX19_01361	0.81	-0.1
1,417,927	+		MPMX19_01361	0.81	-0.1
1,417,927	+		MPMX19_01361	0.81	-0.7
1,417,927	+		MPMX19_01361	0.81	+0.2
1,417,927	+		MPMX19_01361	0.81	+1.3
1,417,927	+		MPMX19_01361	0.81	+0.3
1,417,927	+		MPMX19_01361	0.81	-1.0
1,417,927	+		MPMX19_01361	0.81	-1.2
1,417,928	-		MPMX19_01361	0.81	-1.2
1,417,928	-		MPMX19_01361	0.81	+0.4
1,417,928	-		MPMX19_01361	0.81	+0.1
1,417,928	-		MPMX19_01361	0.81	+1.1
1,417,928	-		MPMX19_01361	0.81	+0.0
1,417,928	-		MPMX19_01361	0.81	+0.0
1,417,928	-		MPMX19_01361	0.81	+0.0
1,418,053	+		MPMX19_01361	0.86	-3.2
1,418,053	+		MPMX19_01361	0.86	+0.1
1,418,053	+		MPMX19_01361	0.86	-1.6
1,418,053	+		MPMX19_01361	0.86	-0.6
1,418,053	+		MPMX19_01361	0.86	+0.8
1,418,053	+		MPMX19_01361	0.86	-1.2
1,418,053	+		MPMX19_01361	0.86	+1.1
1,418,053	+		MPMX19_01361	0.86	+0.0
1,418,053	+		MPMX19_01361	0.86	+0.0
1,418,054	-		MPMX19_01361	0.86	+0.7
1,418,054	-		MPMX19_01361	0.86	-1.3
1,418,054	-		MPMX19_01361	0.86	-0.8
1,418,054	-		MPMX19_01361	0.86	-3.0
1,418,371	+				-0.6
1,418,371	+				-0.3
1,418,371	+				-0.7
1,418,371	+				+0.0
1,418,371	+				-0.3
1,418,371	+				-0.7
1,418,371	+				-0.3
1,418,371	+				-0.3
1,418,371	+				+0.0
1,418,371	+				-0.2
1,418,371	+				-1.6
1,418,371	+				-2.0
1,418,371	+				-1.0
1,418,371	+				-1.3
1,418,371	+				-1.3
1,418,371	+				-2.0
1,418,372	-				-1.8
1,418,372	-				+0.4
1,418,372	-				-1.3
1,418,372	-				-0.6
1,418,372	-				-0.2
1,418,372	-				-1.9
1,418,372	-				-0.7
1,418,372	-				-1.4
1,418,372	-				+0.2
1,418,372	-				-1.3
1,418,372	-				-0.1
1,418,372	-				-1.0
1,418,372	-				-0.7
1,418,372	-				+0.3
1,418,372	-				+0.1
1,418,372	-				-1.3
1,418,372	-				-0.2
1,418,372	-				-0.6
1,418,372	-				-0.7
1,418,372	-				+1.4
1,418,373	+				-0.9
1,418,373	+				+0.0
1,418,374	-				+0.6
1,418,657	+				+0.2
1,418,657	+				+0.2
1,418,657	+				+0.6
1,418,657	+				+0.0
1,418,657	+				-1.0
1,418,657	+				-0.3
1,418,658	-				-0.3
1,418,658	-				-0.5
1,418,658	-				-0.1
1,418,658	-				-1.9
1,418,658	-				+0.0
1,418,658	-				-1.2
1,418,658	-				-0.2
1,418,658	-				-1.0
1,418,659	+				-0.9
1,418,659	+				+0.1
1,419,055	+		MPMX19_01362	0.25	-0.3
1,419,055	+		MPMX19_01362	0.25	+1.3
1,419,077	+		MPMX19_01362	0.26	-0.2
1,419,077	+		MPMX19_01362	0.26	-1.0
1,419,078	-		MPMX19_01362	0.26	-1.2