Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01311 and MPMX19_01312 are separated by 305 nucleotides MPMX19_01312 and MPMX19_01313 are separated by 557 nucleotides
MPMX19_01311: MPMX19_01311 - Protein-L-isoaspartate O-methyltransferase, at 1,368,788 to 1,369,444
_01311
MPMX19_01312: MPMX19_01312 - tRNA-Cys, at 1,369,750 to 1,369,823
_01312
MPMX19_01313: MPMX19_01313 - DNA-invertase hin, at 1,370,381 to 1,370,938
_01313
Position (kb) 1369
1370 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.560 kb on + strand at 1369.560 kb on + strand at 1369.561 kb on - strand at 1369.860 kb on + strand at 1369.873 kb on + strand at 1369.874 kb on - strand at 1369.874 kb on - strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.988 kb on - strand at 1369.988 kb on - strand at 1369.988 kb on - strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.152 kb on + strand at 1370.152 kb on + strand at 1370.152 kb on + strand at 1370.153 kb on - strand at 1370.218 kb on + strand at 1370.218 kb on + strand at 1370.219 kb on - strand at 1370.241 kb on + strand at 1370.242 kb on - strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.357 kb on + strand at 1370.357 kb on + strand at 1370.357 kb on + strand at 1370.357 kb on + strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.406 kb on + strand at 1370.406 kb on + strand at 1370.407 kb on - strand at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 1,369,519 - +1.6 1,369,519 - +0.5 1,369,519 - -0.0 1,369,519 - -0.6 1,369,519 - +2.6 1,369,519 - -2.5 1,369,519 - +0.4 1,369,519 - +0.4 1,369,519 - -0.3 1,369,519 - +0.4 1,369,519 - +1.0 1,369,519 - -0.0 1,369,519 - +1.4 1,369,519 - -1.5 1,369,519 - -0.6 1,369,519 - +0.4 1,369,519 - -0.3 1,369,519 - -0.8 1,369,519 - +0.4 1,369,519 - -0.3 1,369,519 - -0.3 1,369,521 - +1.6 1,369,521 - +0.6 1,369,521 - +0.8 1,369,521 - +0.6 1,369,521 - -0.8 1,369,521 - -0.6 1,369,521 - +1.2 1,369,521 - -0.0 1,369,521 - -1.0 1,369,521 - +0.4 1,369,521 - +0.2 1,369,521 - +0.4 1,369,521 - -0.0 1,369,521 - +1.2 1,369,521 - -2.7 1,369,521 - -0.0 1,369,521 - +0.5 1,369,521 - -0.3 1,369,521 - -1.7 1,369,521 - -0.6 1,369,521 - +1.0 1,369,521 - -0.0 1,369,521 - -0.0 1,369,521 - +1.0 1,369,523 - -1.5 1,369,523 - +0.4 1,369,523 - +1.0 1,369,523 - -1.2 1,369,523 - -0.4 1,369,523 - -0.8 1,369,523 - -0.1 1,369,523 - -0.3 1,369,523 - -0.0 1,369,523 - +0.6 1,369,560 + +0.4 1,369,560 + +1.0 1,369,561 - -0.0 1,369,860 + -1.5 1,369,873 + -1.3 1,369,874 - -3.4 1,369,874 - -1.3 1,369,987 + -0.9 1,369,987 + -0.2 1,369,987 + +0.6 1,369,987 + +0.0 1,369,987 + -0.2 1,369,988 - -1.9 1,369,988 - -1.3 1,369,988 - -0.0 1,370,091 + -1.7 1,370,091 + -0.9 1,370,091 + -1.1 1,370,091 + -1.3 1,370,091 + -0.3 1,370,091 + -1.2 1,370,091 + -1.2 1,370,091 + +1.3 1,370,091 + -0.8 1,370,092 - -0.5 1,370,092 - +0.2 1,370,092 - +0.4 1,370,092 - -1.0 1,370,092 - -0.4 1,370,092 - +0.1 1,370,092 - -2.6 1,370,092 - +1.3 1,370,092 - -0.3 1,370,152 + -0.3 1,370,152 + -1.9 1,370,152 + -2.0 1,370,153 - +1.4 1,370,218 + +1.2 1,370,218 + +1.0 1,370,219 - +0.2 1,370,241 + -1.1 1,370,242 - +0.4 1,370,279 + +0.1 1,370,279 + +1.0 1,370,279 + -0.3 1,370,279 + -1.4 1,370,279 + -0.8 1,370,280 - -1.2 1,370,280 - +0.6 1,370,280 - -0.8 1,370,280 - -0.3 1,370,280 - +0.6 1,370,280 - -0.0 1,370,357 + +1.4 1,370,357 + -1.6 1,370,357 + -1.5 1,370,357 + -0.3 1,370,358 - +0.1 1,370,358 - +2.0 1,370,358 - -0.6 1,370,358 - -0.0 1,370,358 - -1.0 1,370,358 - +0.1 1,370,406 + +2.0 1,370,406 + -0.3 1,370,407 - -0.2 1,370,480 + MPMX19_01313 0.18 +1.1 1,370,480 + MPMX19_01313 0.18 -1.8 1,370,480 + MPMX19_01313 0.18 +0.9 1,370,480 + MPMX19_01313 0.18 -0.0 1,370,480 + MPMX19_01313 0.18 -0.4 1,370,480 + MPMX19_01313 0.18 -0.6 1,370,480 + MPMX19_01313 0.18 +0.4 1,370,480 + MPMX19_01313 0.18 +1.0 1,370,480 + MPMX19_01313 0.18 -1.1 1,370,480 + MPMX19_01313 0.18 -0.3 1,370,480 + MPMX19_01313 0.18 -1.3 1,370,480 + MPMX19_01313 0.18 +0.8 1,370,480 + MPMX19_01313 0.18 -0.2 1,370,480 + MPMX19_01313 0.18 -1.5 1,370,480 + MPMX19_01313 0.18 +0.2 1,370,480 + MPMX19_01313 0.18 -0.0 1,370,480 + MPMX19_01313 0.18 -0.1 1,370,480 + MPMX19_01313 0.18 +0.2 1,370,480 + MPMX19_01313 0.18 -0.0 1,370,480 + MPMX19_01313 0.18 -0.7 1,370,480 + MPMX19_01313 0.18 -0.7 1,370,480 + MPMX19_01313 0.18 +0.2 1,370,480 + MPMX19_01313 0.18 -1.5 1,370,480 + MPMX19_01313 0.18 +0.2 1,370,480 + MPMX19_01313 0.18 -0.8 1,370,480 + MPMX19_01313 0.18 -1.3 1,370,480 + MPMX19_01313 0.18 +0.6 1,370,480 + MPMX19_01313 0.18 -0.8 1,370,480 + MPMX19_01313 0.18 -1.6 1,370,480 + MPMX19_01313 0.18 +0.8 1,370,481 - MPMX19_01313 0.18 -1.5 1,370,481 - MPMX19_01313 0.18 -2.0 1,370,481 - MPMX19_01313 0.18 -1.6 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -0.3 1,370,481 - MPMX19_01313 0.18 -0.0 1,370,481 - MPMX19_01313 0.18 -0.2 1,370,481 - MPMX19_01313 0.18 -0.3 1,370,481 - MPMX19_01313 0.18 +1.2 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -1.0 1,370,481 - MPMX19_01313 0.18 +0.0 1,370,481 - MPMX19_01313 0.18 -1.7 1,370,481 - MPMX19_01313 0.18 -0.5 1,370,481 - MPMX19_01313 0.18 -0.3 1,370,481 - MPMX19_01313 0.18 -0.7 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -0.2 1,370,481 - MPMX19_01313 0.18 -0.0 1,370,481 - MPMX19_01313 0.18 +0.7 1,370,481 - MPMX19_01313 0.18 -0.2 1,370,481 - MPMX19_01313 0.18 -0.5 1,370,481 - MPMX19_01313 0.18 -1.0 1,370,481 - MPMX19_01313 0.18 -0.6 1,370,481 - MPMX19_01313 0.18 +0.4 1,370,481 - MPMX19_01313 0.18 -0.1 1,370,481 - MPMX19_01313 0.18 -0.3 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -0.1 1,370,481 - MPMX19_01313 0.18 -2.0 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -0.2 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 -0.7 1,370,481 - MPMX19_01313 0.18 +0.5 1,370,481 - MPMX19_01313 0.18 -0.3 1,370,481 - MPMX19_01313 0.18 +0.8 1,370,481 - MPMX19_01313 0.18 +0.4 1,370,523 + MPMX19_01313 0.25 -0.2 1,370,523 + MPMX19_01313 0.25 -0.6 1,370,523 + MPMX19_01313 0.25 -1.0 1,370,523 + MPMX19_01313 0.25 +0.4 1,370,523 + MPMX19_01313 0.25 +0.2 1,370,523 + MPMX19_01313 0.25 +2.0 1,370,523 + MPMX19_01313 0.25 -1.5 1,370,523 + MPMX19_01313 0.25 -1.7 1,370,523 + MPMX19_01313 0.25 -0.7 1,370,523 + MPMX19_01313 0.25 +0.1 1,370,523 + MPMX19_01313 0.25 -1.6 1,370,523 + MPMX19_01313 0.25 -1.2 1,370,523 + MPMX19_01313 0.25 +0.6 1,370,523 + MPMX19_01313 0.25 -3.3 1,370,523 + MPMX19_01313 0.25 -0.7 1,370,523 + MPMX19_01313 0.25 -0.5 1,370,523 + MPMX19_01313 0.25 -1.7 1,370,523 + MPMX19_01313 0.25 +1.1 1,370,523 + MPMX19_01313 0.25 -2.9 1,370,523 + MPMX19_01313 0.25 -2.0 1,370,523 + MPMX19_01313 0.25 -1.5 1,370,523 + MPMX19_01313 0.25 -0.6 1,370,523 + MPMX19_01313 0.25 +0.7 1,370,523 + MPMX19_01313 0.25 -0.8 1,370,523 + MPMX19_01313 0.25 -2.0 1,370,523 + MPMX19_01313 0.25 -1.2 1,370,523 + MPMX19_01313 0.25 -0.3 1,370,523 + MPMX19_01313 0.25 -0.7 1,370,523 + MPMX19_01313 0.25 -1.2 1,370,523 + MPMX19_01313 0.25 +0.3 1,370,523 + MPMX19_01313 0.25 -1.3 1,370,523 + MPMX19_01313 0.25 +0.6 1,370,523 + MPMX19_01313 0.25 -0.8 1,370,523 + MPMX19_01313 0.25 -0.6 1,370,523 + MPMX19_01313 0.25 -0.6 1,370,523 + MPMX19_01313 0.25 +0.4 1,370,523 + MPMX19_01313 0.25 -0.2 1,370,523 + MPMX19_01313 0.25 -1.6 1,370,597 + MPMX19_01313 0.39 +0.2 1,370,597 + MPMX19_01313 0.39 -0.5 1,370,597 + MPMX19_01313 0.39 -0.6 1,370,597 + MPMX19_01313 0.39 -1.2 1,370,597 + MPMX19_01313 0.39 +0.2 1,370,597 + MPMX19_01313 0.39 -0.8 1,370,597 + MPMX19_01313 0.39 -0.6 1,370,597 + MPMX19_01313 0.39 -0.6 1,370,597 + MPMX19_01313 0.39 -0.6 1,370,597 + MPMX19_01313 0.39 -0.6 1,370,597 + MPMX19_01313 0.39 -1.5 1,370,597 + MPMX19_01313 0.39 -0.4 1,370,597 + MPMX19_01313 0.39 -1.9 1,370,598 - MPMX19_01313 0.39 -0.7 1,370,598 - MPMX19_01313 0.39 -1.8 1,370,598 - MPMX19_01313 0.39 -0.6 1,370,598 - MPMX19_01313 0.39 +0.1 1,370,598 - MPMX19_01313 0.39 -1.7
Or see this region's nucleotide sequence