Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01271

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,326,436	+		MPMX19_01270	0.36	+0.8
1,326,436	+		MPMX19_01270	0.36	-0.8
1,326,436	+		MPMX19_01270	0.36	+0.0
1,326,436	+		MPMX19_01270	0.36	-0.0
1,326,437	-		MPMX19_01270	0.36	+0.1
1,326,437	-		MPMX19_01270	0.36	-0.1
1,326,437	-		MPMX19_01270	0.36	+0.1
1,326,617	-		MPMX19_01270	0.51	-2.1
1,326,784	+		MPMX19_01270	0.65	+1.0
1,326,785	-		MPMX19_01270	0.65	+0.1
1,326,955	+		MPMX19_01270	0.79	-1.0
1,326,955	+		MPMX19_01270	0.79	+1.0
1,326,955	+		MPMX19_01270	0.79	-0.6
1,326,955	+		MPMX19_01270	0.79	+0.7
1,326,955	+		MPMX19_01270	0.79	-0.0
1,326,955	+		MPMX19_01270	0.79	-1.0
1,326,955	+		MPMX19_01270	0.79	-0.6
1,326,956	-		MPMX19_01270	0.79	+0.8
1,326,956	-		MPMX19_01270	0.79	-0.6
1,326,956	-		MPMX19_01270	0.79	-0.0
1,326,956	-		MPMX19_01270	0.79	+0.8
1,326,956	-		MPMX19_01270	0.79	-0.0
1,326,956	-		MPMX19_01270	0.79	-0.1
1,326,956	-		MPMX19_01270	0.79	-0.6
1,326,956	-		MPMX19_01270	0.79	-1.7
1,327,210	+				-0.3
1,327,210	+				-0.9
1,327,210	+				-0.8
1,327,211	-				-1.2
1,327,211	-				-1.6
1,327,235	+				-0.6
1,327,235	+				-1.6
1,327,235	+				-1.4
1,327,235	+				-0.3
1,327,235	+				-0.0
1,327,235	+				-1.1
1,327,235	+				-0.6
1,327,235	+				+0.1
1,327,235	+				-1.5
1,327,235	+				-0.3
1,327,235	+				-0.7
1,327,235	+				-0.7
1,327,236	-				-0.5
1,327,236	-				-1.3
1,327,236	-				-0.3
1,327,236	-				-0.8
1,327,236	-				+0.2
1,327,236	-				+0.7
1,327,236	-				+1.0
1,327,236	-				+0.4
1,327,236	-				-0.5
1,327,236	-				-1.2
1,327,236	-				-0.3
1,327,236	-				-0.6
1,327,236	-				-0.8
1,327,236	-				-1.0
1,327,236	-				-0.1
1,327,236	-				-1.3
1,327,236	-				-0.5
1,327,236	-				-0.6
1,327,236	-				+1.0
1,327,236	-				-0.0
1,327,236	-				-0.3
1,327,236	-				-0.1
1,327,572	-		MPMX19_01271	0.45	+1.0
1,327,572	-		MPMX19_01271	0.45	+1.0
1,327,572	-		MPMX19_01271	0.45	-0.4
1,327,572	-		MPMX19_01271	0.45	-1.7
1,327,572	-		MPMX19_01271	0.45	-1.0
1,327,589	+		MPMX19_01271	0.47	+1.9
1,327,589	+		MPMX19_01271	0.47	-0.5
1,327,590	-		MPMX19_01271	0.48	+0.4
1,327,590	-		MPMX19_01271	0.48	-1.5
1,327,590	-		MPMX19_01271	0.48	-0.7
1,327,590	-		MPMX19_01271	0.48	-1.7
1,327,590	-		MPMX19_01271	0.48	+1.0
1,328,041	+				-0.7
1,328,041	+				-2.7
1,328,041	+				+0.0
1,328,041	+				+0.6
1,328,041	+				+1.0
1,328,041	+				-1.6
1,328,042	-				-0.3
1,328,065	+		MPMX19_01272	0.11	-0.6
1,328,065	+		MPMX19_01272	0.11	-0.8
1,328,065	+		MPMX19_01272	0.11	+0.1
1,328,065	+		MPMX19_01272	0.11	-0.4
1,328,065	+		MPMX19_01272	0.11	-0.6
1,328,065	+		MPMX19_01272	0.11	+2.0
1,328,065	+		MPMX19_01272	0.11	-0.7
1,328,065	+		MPMX19_01272	0.11	-1.1
1,328,065	+		MPMX19_01272	0.11	-2.3
1,328,065	+		MPMX19_01272	0.11	+0.2
1,328,065	+		MPMX19_01272	0.11	-0.1
1,328,065	+		MPMX19_01272	0.11	-0.5
1,328,065	+		MPMX19_01272	0.11	-0.0
1,328,065	+		MPMX19_01272	0.11	-1.8
1,328,065	+		MPMX19_01272	0.11	-1.2
1,328,065	+		MPMX19_01272	0.11	-0.7
1,328,065	+		MPMX19_01272	0.11	-0.0
1,328,065	+		MPMX19_01272	0.11	-1.0
1,328,065	+		MPMX19_01272	0.11	-1.3
1,328,065	+		MPMX19_01272	0.11	-0.5
1,328,065	+		MPMX19_01272	0.11	-0.1
1,328,065	+		MPMX19_01272	0.11	-0.6
1,328,065	+		MPMX19_01272	0.11	+1.2
1,328,065	+		MPMX19_01272	0.11	+0.4
1,328,065	+		MPMX19_01272	0.11	-1.0
1,328,066	-		MPMX19_01272	0.11	-0.4
1,328,066	-		MPMX19_01272	0.11	+0.1
1,328,066	-		MPMX19_01272	0.11	-0.3
1,328,066	-		MPMX19_01272	0.11	+0.1
1,328,066	-		MPMX19_01272	0.11	-1.2
1,328,066	-		MPMX19_01272	0.11	+0.6
1,328,066	-		MPMX19_01272	0.11	-0.6
1,328,066	-		MPMX19_01272	0.11	+0.3
1,328,066	-		MPMX19_01272	0.11	-0.0
1,328,066	-		MPMX19_01272	0.11	-1.6
1,328,066	-		MPMX19_01272	0.11	-0.6
1,328,066	-		MPMX19_01272	0.11	+0.3
1,328,066	-		MPMX19_01272	0.11	+0.6
1,328,066	-		MPMX19_01272	0.11	-0.9
1,328,066	-		MPMX19_01272	0.11	+0.4
1,328,066	-		MPMX19_01272	0.11	-1.7
1,328,066	-		MPMX19_01272	0.11	-0.6
1,328,066	-		MPMX19_01272	0.11	-1.6
1,328,066	-		MPMX19_01272	0.11	+0.2
1,328,066	-		MPMX19_01272	0.11	-1.7
1,328,066	-		MPMX19_01272	0.11	+0.1
1,328,066	-		MPMX19_01272	0.11	-0.3
1,328,066	-		MPMX19_01272	0.11	-0.3
1,328,269	+		MPMX19_01272	0.38	+0.6
1,328,269	+		MPMX19_01272	0.38	+0.3
1,328,269	+		MPMX19_01272	0.38	-0.3
1,328,269	+		MPMX19_01272	0.38	-1.2
1,328,314	+		MPMX19_01272	0.44	+0.7
1,328,314	+		MPMX19_01272	0.44	-1.3
1,328,314	+		MPMX19_01272	0.44	-0.7
1,328,314	+		MPMX19_01272	0.44	-1.9
1,328,314	+		MPMX19_01272	0.44	+1.1
1,328,314	+		MPMX19_01272	0.44	+0.2
1,328,314	+		MPMX19_01272	0.44	+0.5
1,328,314	+		MPMX19_01272	0.44	+0.4
1,328,314	+		MPMX19_01272	0.44	-0.4
1,328,314	+		MPMX19_01272	0.44	-0.0
1,328,314	+		MPMX19_01272	0.44	-0.6
1,328,314	+		MPMX19_01272	0.44	-1.5
1,328,314	+		MPMX19_01272	0.44	-0.2
1,328,315	-		MPMX19_01272	0.44	-0.8
1,328,315	-		MPMX19_01272	0.44	-0.7
1,328,315	-		MPMX19_01272	0.44	+2.0
1,328,315	-		MPMX19_01272	0.44	+1.4
1,328,315	-		MPMX19_01272	0.44	-0.9
1,328,315	-		MPMX19_01272	0.44	-0.4
1,328,315	-		MPMX19_01272	0.44	-0.9
1,328,323	+		MPMX19_01272	0.46	-0.0
1,328,323	+		MPMX19_01272	0.46	-0.4
1,328,323	+		MPMX19_01272	0.46	-1.0
1,328,323	+		MPMX19_01272	0.46	-0.9
1,328,323	+		MPMX19_01272	0.46	+0.3
1,328,323	+		MPMX19_01272	0.46	-0.4
1,328,323	+		MPMX19_01272	0.46	-1.0
1,328,323	+		MPMX19_01272	0.46	-2.3
1,328,323	+		MPMX19_01272	0.46	-1.0
1,328,324	-		MPMX19_01272	0.46	-1.1
1,328,324	-		MPMX19_01272	0.46	-1.5
1,328,324	-		MPMX19_01272	0.46	+0.4
1,328,324	-		MPMX19_01272	0.46	-0.1
1,328,324	-		MPMX19_01272	0.46	+1.0
1,328,324	-		MPMX19_01272	0.46	-0.7
1,328,324	-		MPMX19_01272	0.46	-1.6
1,328,324	-		MPMX19_01272	0.46	-0.6
1,328,324	-		MPMX19_01272	0.46	+0.4
1,328,324	-		MPMX19_01272	0.46	-2.7
1,328,326	+		MPMX19_01272	0.46	-0.5
1,328,326	+		MPMX19_01272	0.46	+0.4
1,328,326	+		MPMX19_01272	0.46	-0.4
1,328,326	+		MPMX19_01272	0.46	-0.0
1,328,326	+		MPMX19_01272	0.46	-2.4
1,328,326	+		MPMX19_01272	0.46	-0.2
1,328,326	+		MPMX19_01272	0.46	+0.4
1,328,326	+		MPMX19_01272	0.46	-1.6
1,328,326	+		MPMX19_01272	0.46	+0.3
1,328,326	+		MPMX19_01272	0.46	-0.3
1,328,326	+		MPMX19_01272	0.46	-0.3
1,328,326	+		MPMX19_01272	0.46	-1.0
1,328,326	+		MPMX19_01272	0.46	-0.8
1,328,326	+		MPMX19_01272	0.46	+0.5
1,328,326	+		MPMX19_01272	0.46	+0.3
1,328,326	+		MPMX19_01272	0.46	-0.8
1,328,326	+		MPMX19_01272	0.46	+0.5
1,328,326	+		MPMX19_01272	0.46	-0.1
1,328,326	+		MPMX19_01272	0.46	+0.4
1,328,326	+		MPMX19_01272	0.46	+0.7
1,328,326	+		MPMX19_01272	0.46	+0.7
1,328,327	-		MPMX19_01272	0.46	-1.2
1,328,327	-		MPMX19_01272	0.46	+1.0
1,328,327	-		MPMX19_01272	0.46	-0.7
1,328,327	-		MPMX19_01272	0.46	-0.0
1,328,327	-		MPMX19_01272	0.46	-0.4
1,328,327	-		MPMX19_01272	0.46	-1.4
1,328,327	-		MPMX19_01272	0.46	-2.2
1,328,327	-		MPMX19_01272	0.46	-1.2
1,328,327	-		MPMX19_01272	0.46	-0.2
1,328,327	-		MPMX19_01272	0.46	-0.0
1,328,327	-		MPMX19_01272	0.46	+1.0
1,328,327	-		MPMX19_01272	0.46	-0.0
1,328,327	-		MPMX19_01272	0.46	-0.8
1,328,327	-		MPMX19_01272	0.46	+1.3
1,328,327	-		MPMX19_01272	0.46	+0.7
1,328,327	-		MPMX19_01272	0.46	-1.9
1,328,327	-		MPMX19_01272	0.46	-0.9
1,328,327	-		MPMX19_01272	0.46	-3.0
1,328,327	-		MPMX19_01272	0.46	-0.7
1,328,327	-		MPMX19_01272	0.46	-0.5
1,328,327	-		MPMX19_01272	0.46	+0.4
1,328,539	+		MPMX19_01272	0.74	+0.1
1,328,539	+		MPMX19_01272	0.74	-0.0
1,328,539	+		MPMX19_01272	0.74	-1.2
1,328,539	+		MPMX19_01272	0.74	-0.6
1,328,539	+		MPMX19_01272	0.74	-0.1
1,328,539	+		MPMX19_01272	0.74	-0.6
1,328,539	+		MPMX19_01272	0.74	-0.1
1,328,539	+		MPMX19_01272	0.74	-1.6
1,328,540	-		MPMX19_01272	0.74	-1.2
1,328,540	-		MPMX19_01272	0.74	+1.0
1,328,540	-		MPMX19_01272	0.74	+1.0
1,328,540	-		MPMX19_01272	0.74	+0.9
1,328,540	-		MPMX19_01272	0.74	+1.3
1,328,540	-		MPMX19_01272	0.74	-0.3
1,328,540	-		MPMX19_01272	0.74	-0.6
1,328,540	-		MPMX19_01272	0.74	-0.1
1,328,720	+				+0.5
1,328,720	+				-1.9
1,328,720	+				-0.2
1,328,720	+				-0.3
1,328,720	+				-0.5
1,328,721	-				-1.3
1,328,721	-				-0.1
1,328,721	-				+0.1
1,328,721	-				-0.3
1,328,721	-				+0.4
1,328,721	-				-0.3
1,328,722	+				+0.5
1,328,722	+				-0.7
1,328,722	+				+1.1
1,328,722	+				-0.6
1,328,722	+				-0.8
1,328,722	+				-1.5
1,328,722	+				-0.1
1,328,722	+				-0.6
1,328,722	+				-1.9
1,328,722	+				-0.5
1,328,722	+				+1.3
1,328,722	+				+1.0
1,328,722	+				-1.0
1,328,722	+				-0.2
1,328,722	+				-0.2
1,328,722	+				-0.4
1,328,722	+				+0.4
1,328,722	+				+1.0
1,328,722	+				-1.6
1,328,722	+				-0.9
1,328,722	+				-0.0
1,328,722	+				-1.3
1,328,722	+				+1.0
1,328,722	+				-0.1
1,328,722	+				-0.8
1,328,723	-				-1.3
1,328,723	-				-1.0
1,328,723	-				-1.3
1,328,723	-				+0.3
1,328,723	-				+0.5
1,328,723	-				-0.0
1,328,723	-				+0.3
1,328,723	-				+0.2
1,328,723	-				-0.0
1,328,723	-				-1.1
1,328,723	-				-1.2
1,328,723	-				-1.3
1,328,723	-				-0.1
1,328,723	-				-1.0
1,328,723	-				-0.3
1,328,723	-				+0.1
1,328,723	-				-0.7
1,328,723	-				-1.0
1,328,723	-				-0.1
1,328,723	-				-1.4
1,328,723	-				-0.6
1,328,723	-				-1.4
1,328,723	-				-0.2
1,328,723	-				-0.5
1,328,723	-				-0.5
1,328,723	-				-0.3
1,328,775	+				-0.6
1,328,775	+				-2.4
1,328,775	+				-0.6
1,328,775	+				+0.8
1,328,775	+				-0.4
1,328,775	+				-1.5
1,328,775	+				+0.4
1,328,775	+				-0.8
1,328,775	+				-0.0
1,328,776	-				-1.0
1,328,776	-				+0.6
1,328,776	-				+0.9
1,328,776	-				+1.1
1,328,776	-				+1.0
1,328,776	-				+0.6
1,328,776	-				-0.2
1,328,776	-				-0.2
1,328,776	-				-0.2
1,328,793	+				+2.0
1,328,793	+				-0.9
1,328,793	+				-1.7
1,328,793	+				+0.6
1,328,793	+				-0.6
1,328,793	+				-0.7
1,328,793	+				-0.0
1,328,793	+				-1.0
1,328,793	+				+0.2
1,328,793	+				-0.9
1,328,793	+				-1.1
1,328,793	+				+0.2
1,328,794	-				-0.8
1,328,794	-				+0.6
1,328,794	-				+0.3
1,328,794	-				-0.2
1,328,794	-				-2.3
1,328,794	-				+0.1
1,328,794	-				-0.6
1,328,794	-				+0.2
1,328,794	-				-0.9
1,328,794	-				-1.2
1,328,794	-				-1.3
1,328,859	+				-0.8
1,328,859	+				-0.4
1,328,859	+				-0.8
1,328,859	+				-0.5
1,328,859	+				+0.3
1,328,859	+				+0.4
1,328,859	+				+0.5
1,328,859	+				-0.3
1,328,859	+				-0.8
1,328,860	-				-1.1
1,328,860	-				+0.6
1,328,860	-				-0.2
1,328,860	-				-0.8
1,328,860	-				-1.5
1,328,860	-				-0.2
1,328,860	-				+0.7
1,328,976	+		MPMX19_01273	0.19	-1.0
1,328,976	+		MPMX19_01273	0.19	-0.5
1,328,976	+		MPMX19_01273	0.19	-0.7
1,328,976	+		MPMX19_01273	0.19	-0.6
1,328,976	+		MPMX19_01273	0.19	+0.6
1,328,976	+		MPMX19_01273	0.19	-0.8
1,328,976	+		MPMX19_01273	0.19	-0.2
1,328,976	+		MPMX19_01273	0.19	-1.5
1,328,976	+		MPMX19_01273	0.19	+0.4
1,328,976	+		MPMX19_01273	0.19	-1.7
1,328,976	+		MPMX19_01273	0.19	+0.4
1,328,976	+		MPMX19_01273	0.19	-0.2
1,328,976	+		MPMX19_01273	0.19	-0.4
1,328,976	+		MPMX19_01273	0.19	-1.4
1,328,976	+		MPMX19_01273	0.19	-0.0
1,328,976	+		MPMX19_01273	0.19	+0.7
1,328,976	+		MPMX19_01273	0.19	+0.3
1,328,977	-		MPMX19_01273	0.20	+0.1
1,328,977	-		MPMX19_01273	0.20	-0.3
1,328,977	-		MPMX19_01273	0.20	+0.7
1,328,977	-		MPMX19_01273	0.20	-0.6
1,328,977	-		MPMX19_01273	0.20	+0.7
1,328,977	-		MPMX19_01273	0.20	-0.1
1,328,977	-		MPMX19_01273	0.20	+0.7
1,328,977	-		MPMX19_01273	0.20	-0.8
1,328,977	-		MPMX19_01273	0.20	-1.8
1,328,977	-		MPMX19_01273	0.20	-0.7
1,328,977	-		MPMX19_01273	0.20	-0.7
1,328,977	-		MPMX19_01273	0.20	-2.4
1,328,977	-		MPMX19_01273	0.20	-1.5
1,328,977	-		MPMX19_01273	0.20	+1.5
1,328,977	-		MPMX19_01273	0.20	-0.0
1,328,977	-		MPMX19_01273	0.20	-1.2