Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01185

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,227,627	+		MPMX19_01184	0.20	-2.3
1,227,627	+		MPMX19_01184	0.20	-0.7
1,227,627	+		MPMX19_01184	0.20	-0.6
1,227,627	+		MPMX19_01184	0.20	-0.5
1,227,627	+		MPMX19_01184	0.20	-0.5
1,227,627	+		MPMX19_01184	0.20	+1.2
1,227,627	+		MPMX19_01184	0.20	-0.4
1,227,627	+		MPMX19_01184	0.20	-0.9
1,227,627	+		MPMX19_01184	0.20	-0.2
1,227,627	+		MPMX19_01184	0.20	+0.1
1,227,627	+		MPMX19_01184	0.20	-0.7
1,227,627	+		MPMX19_01184	0.20	-1.3
1,227,627	+		MPMX19_01184	0.20	-1.5
1,227,627	+		MPMX19_01184	0.20	-1.0
1,227,628	-		MPMX19_01184	0.20	-1.0
1,227,628	-		MPMX19_01184	0.20	-0.0
1,227,628	-		MPMX19_01184	0.20	-1.5
1,227,628	-		MPMX19_01184	0.20	-1.2
1,227,628	-		MPMX19_01184	0.20	-0.2
1,227,628	-		MPMX19_01184	0.20	-0.0
1,227,628	-		MPMX19_01184	0.20	-0.3
1,227,628	-		MPMX19_01184	0.20	-1.9
1,227,628	-		MPMX19_01184	0.20	-1.1
1,227,831	+		MPMX19_01184	0.42	+0.6
1,227,939	+		MPMX19_01184	0.55	-0.3
1,227,939	+		MPMX19_01184	0.55	-0.3
1,227,939	+		MPMX19_01184	0.55	-0.6
1,227,939	+		MPMX19_01184	0.55	-0.6
1,227,939	+		MPMX19_01184	0.55	-0.8
1,227,939	+		MPMX19_01184	0.55	-0.6
1,227,939	+		MPMX19_01184	0.55	+2.0
1,227,940	-		MPMX19_01184	0.55	+0.2
1,227,940	-		MPMX19_01184	0.55	-1.6
1,227,940	-		MPMX19_01184	0.55	-0.5
1,227,940	-		MPMX19_01184	0.55	-1.5
1,227,940	-		MPMX19_01184	0.55	-0.6
1,227,940	-		MPMX19_01184	0.55	-2.1
1,228,191	+		MPMX19_01184	0.83	-0.3
1,228,191	+		MPMX19_01184	0.83	-1.1
1,228,191	+		MPMX19_01184	0.83	-1.7
1,228,191	+		MPMX19_01184	0.83	-2.3
1,228,191	+		MPMX19_01184	0.83	+0.2
1,228,191	+		MPMX19_01184	0.83	-0.5
1,228,191	+		MPMX19_01184	0.83	-1.5
1,228,191	+		MPMX19_01184	0.83	-0.8
1,228,191	+		MPMX19_01184	0.83	-1.9
1,228,191	+		MPMX19_01184	0.83	-0.3
1,228,191	+		MPMX19_01184	0.83	+0.8
1,228,191	+		MPMX19_01184	0.83	+0.1
1,228,191	+		MPMX19_01184	0.83	-0.5
1,228,191	+		MPMX19_01184	0.83	-1.0
1,228,191	+		MPMX19_01184	0.83	-1.9
1,228,191	+		MPMX19_01184	0.83	-0.9
1,228,191	+		MPMX19_01184	0.83	-0.3
1,228,191	+		MPMX19_01184	0.83	-1.3
1,228,191	+		MPMX19_01184	0.83	-0.3
1,228,191	+		MPMX19_01184	0.83	-1.7
1,228,191	+		MPMX19_01184	0.83	-1.5
1,228,192	-		MPMX19_01184	0.83	-1.5
1,228,192	-		MPMX19_01184	0.83	-1.0
1,228,192	-		MPMX19_01184	0.83	-1.4
1,228,192	-		MPMX19_01184	0.83	+1.2
1,228,192	-		MPMX19_01184	0.83	-0.1
1,228,192	-		MPMX19_01184	0.83	-0.7
1,228,192	-		MPMX19_01184	0.83	+1.0
1,228,192	-		MPMX19_01184	0.83	-1.3
1,228,192	-		MPMX19_01184	0.83	+1.0
1,228,192	-		MPMX19_01184	0.83	-0.9
1,228,192	-		MPMX19_01184	0.83	+0.7
1,228,192	-		MPMX19_01184	0.83	-0.8
1,228,192	-		MPMX19_01184	0.83	-0.8
1,228,192	-		MPMX19_01184	0.83	-0.8
1,228,192	-		MPMX19_01184	0.83	+0.4
1,228,192	-		MPMX19_01184	0.83	-0.8
1,228,192	-		MPMX19_01184	0.83	+0.7
1,228,192	-		MPMX19_01184	0.83	-0.5
1,228,192	-		MPMX19_01184	0.83	-2.7
1,228,192	-		MPMX19_01184	0.83	-1.0
1,228,192	-		MPMX19_01184	0.83	-0.2
1,228,212	+		MPMX19_01184	0.85	-0.4
1,228,212	+		MPMX19_01184	0.85	-1.0
1,228,212	+		MPMX19_01184	0.85	+0.1
1,228,212	+		MPMX19_01184	0.85	+0.4
1,228,212	+		MPMX19_01184	0.85	-0.3
1,228,212	+		MPMX19_01184	0.85	+0.7
1,228,212	+		MPMX19_01184	0.85	-0.5
1,228,212	+		MPMX19_01184	0.85	+0.8
1,228,212	+		MPMX19_01184	0.85	-0.4
1,228,212	+		MPMX19_01184	0.85	-0.8
1,228,212	+		MPMX19_01184	0.85	-1.7
1,228,212	+		MPMX19_01184	0.85	-1.2
1,228,212	+		MPMX19_01184	0.85	+1.2
1,228,212	+		MPMX19_01184	0.85	+0.2
1,228,212	+		MPMX19_01184	0.85	-1.5
1,228,212	+		MPMX19_01184	0.85	-1.6
1,228,212	+		MPMX19_01184	0.85	+0.3
1,228,212	+		MPMX19_01184	0.85	-0.7
1,228,212	+		MPMX19_01184	0.85	-0.8
1,228,212	+		MPMX19_01184	0.85	+0.3
1,228,212	+		MPMX19_01184	0.85	-1.0
1,228,212	+		MPMX19_01184	0.85	+0.1
1,228,212	+		MPMX19_01184	0.85	-0.5
1,228,212	+		MPMX19_01184	0.85	-1.7
1,228,212	+		MPMX19_01184	0.85	+0.1
1,228,212	+		MPMX19_01184	0.85	-0.6
1,228,212	+		MPMX19_01184	0.85	-1.3
1,228,212	+		MPMX19_01184	0.85	-0.7
1,228,212	+		MPMX19_01184	0.85	-0.2
1,228,212	+		MPMX19_01184	0.85	-0.7
1,228,212	+		MPMX19_01184	0.85	-0.4
1,228,213	-		MPMX19_01184	0.85	-0.7
1,228,213	-		MPMX19_01184	0.85	-0.6
1,228,213	-		MPMX19_01184	0.85	+0.0
1,228,213	-		MPMX19_01184	0.85	-1.9
1,228,213	-		MPMX19_01184	0.85	-1.2
1,228,213	-		MPMX19_01184	0.85	-0.8
1,228,213	-		MPMX19_01184	0.85	-1.0
1,228,213	-		MPMX19_01184	0.85	-1.1
1,228,213	-		MPMX19_01184	0.85	+1.2
1,228,213	-		MPMX19_01184	0.85	+1.0
1,228,213	-		MPMX19_01184	0.85	+0.2
1,228,213	-		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	-0.8
1,228,213	-		MPMX19_01184	0.85	-0.1
1,228,213	-		MPMX19_01184	0.85	-1.3
1,228,213	-		MPMX19_01184	0.85	-0.7
1,228,213	-		MPMX19_01184	0.85	+0.7
1,228,213	-		MPMX19_01184	0.85	-0.0
1,228,213	-		MPMX19_01184	0.85	-0.5
1,228,213	-		MPMX19_01184	0.85	-0.7
1,228,213	-		MPMX19_01184	0.85	-0.4
1,228,213	-		MPMX19_01184	0.85	-2.7
1,228,213	-		MPMX19_01184	0.85	+0.8
1,228,213	-		MPMX19_01184	0.85	-0.8
1,228,213	-		MPMX19_01184	0.85	-0.8
1,228,213	-		MPMX19_01184	0.85	-1.1
1,228,213	-		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	+2.0
1,228,213	-		MPMX19_01184	0.85	+0.3
1,228,213	-		MPMX19_01184	0.85	-0.8
1,228,213	-		MPMX19_01184	0.85	-0.3
1,228,213	-		MPMX19_01184	0.85	-0.1
1,228,213	-		MPMX19_01184	0.85	+0.5
1,228,213	-		MPMX19_01184	0.85	+0.4
1,228,213	-		MPMX19_01184	0.85	-2.0
1,228,216	+		MPMX19_01184	0.85	-0.3
1,228,216	+		MPMX19_01184	0.85	-1.2
1,228,216	+		MPMX19_01184	0.85	-0.6
1,228,216	+		MPMX19_01184	0.85	-1.6
1,228,216	+		MPMX19_01184	0.85	-1.5
1,228,216	+		MPMX19_01184	0.85	+0.4
1,228,216	+		MPMX19_01184	0.85	+0.2
1,228,216	+		MPMX19_01184	0.85	-0.5
1,228,216	+		MPMX19_01184	0.85	+0.8
1,228,216	+		MPMX19_01184	0.85	-1.2
1,228,216	+		MPMX19_01184	0.85	-0.1
1,228,216	+		MPMX19_01184	0.85	-0.2
1,228,216	+		MPMX19_01184	0.85	-2.0
1,228,216	+		MPMX19_01184	0.85	-0.7
1,228,216	+		MPMX19_01184	0.85	-0.5
1,228,216	+		MPMX19_01184	0.85	-0.4
1,228,216	+		MPMX19_01184	0.85	-1.3
1,228,216	+		MPMX19_01184	0.85	-1.6
1,228,216	+		MPMX19_01184	0.85	-1.4
1,228,216	+		MPMX19_01184	0.85	-0.5
1,228,216	+		MPMX19_01184	0.85	-0.9
1,228,217	-		MPMX19_01184	0.86	+1.4
1,228,217	-		MPMX19_01184	0.86	-0.5
1,228,217	-		MPMX19_01184	0.86	-0.9
1,228,217	-		MPMX19_01184	0.86	-1.9
1,228,217	-		MPMX19_01184	0.86	+0.4
1,228,217	-		MPMX19_01184	0.86	-1.9
1,228,217	-		MPMX19_01184	0.86	+1.0
1,228,217	-		MPMX19_01184	0.86	-1.5
1,228,217	-		MPMX19_01184	0.86	-0.7
1,228,217	-		MPMX19_01184	0.86	-0.7
1,228,217	-		MPMX19_01184	0.86	+2.0
1,228,217	-		MPMX19_01184	0.86	-0.8
1,228,217	-		MPMX19_01184	0.86	-0.9
1,228,217	-		MPMX19_01184	0.86	-1.5
1,228,217	-		MPMX19_01184	0.86	+0.4
1,228,217	-		MPMX19_01184	0.86	-0.0
1,228,217	-		MPMX19_01184	0.86	-0.9
1,228,217	-		MPMX19_01184	0.86	+0.9
1,228,217	-		MPMX19_01184	0.86	-0.0
1,228,217	-		MPMX19_01184	0.86	-1.0
1,228,217	-		MPMX19_01184	0.86	-0.0
1,228,217	-		MPMX19_01184	0.86	-0.8
1,228,217	-		MPMX19_01184	0.86	+1.2
1,228,217	-		MPMX19_01184	0.86	-0.3
1,228,217	-		MPMX19_01184	0.86	+0.1
1,228,217	-		MPMX19_01184	0.86	-0.6
1,228,217	-		MPMX19_01184	0.86	-1.6
1,228,217	-		MPMX19_01184	0.86	-1.2
1,228,217	-		MPMX19_01184	0.86	-0.9
1,228,217	-		MPMX19_01184	0.86	-1.3
1,228,217	-		MPMX19_01184	0.86	-2.0
1,228,217	-		MPMX19_01184	0.86	+1.6
1,228,217	-		MPMX19_01184	0.86	-0.6
1,228,428	+				-0.5
1,228,428	+				-0.7
1,228,428	+				-0.2
1,228,428	+				-0.0
1,228,429	-				-0.0
1,228,429	-				-0.6
1,228,429	-				+0.4
1,228,429	-				+0.8
1,228,429	-				-0.0
1,228,429	-				-0.5
1,228,429	-				-1.9
1,228,446	+				-1.2
1,228,701	+		MPMX19_01185	0.30	-0.8
1,228,701	+		MPMX19_01185	0.30	-0.8
1,228,701	+		MPMX19_01185	0.30	-2.2
1,228,701	+		MPMX19_01185	0.30	-0.5
1,228,701	+		MPMX19_01185	0.30	-0.2
1,228,701	+		MPMX19_01185	0.30	-0.3
1,228,701	+		MPMX19_01185	0.30	-0.3
1,228,702	-		MPMX19_01185	0.30	-1.0
1,228,702	-		MPMX19_01185	0.30	-1.5
1,228,702	-		MPMX19_01185	0.30	-1.0
1,228,702	-		MPMX19_01185	0.30	+0.2
1,228,702	-		MPMX19_01185	0.30	-0.8
1,228,702	-		MPMX19_01185	0.30	-1.3
1,228,702	-		MPMX19_01185	0.30	+0.4
1,228,702	-		MPMX19_01185	0.30	-1.5
1,228,702	-		MPMX19_01185	0.30	-1.7
1,228,804	+		MPMX19_01185	0.42	-1.9
1,228,804	+		MPMX19_01185	0.42	+0.1
1,228,805	-		MPMX19_01185	0.42	+0.2
1,228,805	-		MPMX19_01185	0.42	-0.0
1,228,805	-		MPMX19_01185	0.42	-1.7
1,228,805	-		MPMX19_01185	0.42	-0.3
1,228,988	+		MPMX19_01185	0.63	-1.3
1,229,398	+				-1.0
1,229,518	+		MPMX19_01186	0.20	-0.6
1,229,518	+		MPMX19_01186	0.20	-0.8
1,229,518	+		MPMX19_01186	0.20	+0.2
1,229,518	+		MPMX19_01186	0.20	-0.8
1,229,519	-		MPMX19_01186	0.20	-1.8
1,229,519	-		MPMX19_01186	0.20	-1.2
1,229,519	-		MPMX19_01186	0.20	-1.2
1,229,519	-		MPMX19_01186	0.20	-1.2
1,229,519	-		MPMX19_01186	0.20	-0.2
1,229,519	-		MPMX19_01186	0.20	-1.7
1,229,590	+		MPMX19_01186	0.27	-0.5
1,229,590	+		MPMX19_01186	0.27	+1.1
1,229,590	+		MPMX19_01186	0.27	-2.1
1,229,590	+		MPMX19_01186	0.27	-1.0
1,229,591	-		MPMX19_01186	0.27	-0.3
1,229,591	-		MPMX19_01186	0.27	+0.8
1,229,591	-		MPMX19_01186	0.27	-0.4
1,229,591	-		MPMX19_01186	0.27	-0.7
1,229,596	+		MPMX19_01186	0.28	-0.5
1,229,614	+		MPMX19_01186	0.30	+0.7
1,229,614	+		MPMX19_01186	0.30	-1.8
1,229,615	-		MPMX19_01186	0.30	+1.0
1,229,615	-		MPMX19_01186	0.30	-2.1
1,229,615	-		MPMX19_01186	0.30	-2.1
1,229,770	+		MPMX19_01186	0.46	-0.5
1,229,770	+		MPMX19_01186	0.46	-1.3
1,229,771	-		MPMX19_01186	0.46	+0.4
1,229,771	-		MPMX19_01186	0.46	-0.2
1,229,771	-		MPMX19_01186	0.46	+1.4
1,229,771	-		MPMX19_01186	0.46	-0.3
1,229,872	+		MPMX19_01186	0.57	-2.0
1,229,872	+		MPMX19_01186	0.57	-0.5
1,229,873	-		MPMX19_01186	0.57	-0.5
1,229,873	-		MPMX19_01186	0.57	-0.7
1,229,873	-		MPMX19_01186	0.57	-0.3
1,229,873	-		MPMX19_01186	0.57	-1.0
1,229,873	-		MPMX19_01186	0.57	-0.6
1,229,873	-		MPMX19_01186	0.57	-1.5
1,229,992	+		MPMX19_01186	0.70	+0.9
1,229,992	+		MPMX19_01186	0.70	-0.8
1,229,992	+		MPMX19_01186	0.70	-1.5
1,229,992	+		MPMX19_01186	0.70	+0.3
1,229,992	+		MPMX19_01186	0.70	-1.7
1,229,992	+		MPMX19_01186	0.70	+1.0
1,229,992	+		MPMX19_01186	0.70	-1.0
1,229,992	+		MPMX19_01186	0.70	-0.8
1,229,992	+		MPMX19_01186	0.70	-1.0
1,229,992	+		MPMX19_01186	0.70	-1.0
1,229,992	+		MPMX19_01186	0.70	-1.0
1,229,992	+		MPMX19_01186	0.70	-0.3
1,229,993	-		MPMX19_01186	0.70	+0.7
1,229,993	-		MPMX19_01186	0.70	-1.0
1,229,993	-		MPMX19_01186	0.70	-1.1
1,229,993	-		MPMX19_01186	0.70	-0.2
1,229,993	-		MPMX19_01186	0.70	-0.1
1,229,993	-		MPMX19_01186	0.70	-0.3
1,229,993	-		MPMX19_01186	0.70	-0.0
1,229,993	-		MPMX19_01186	0.70	-0.2
1,229,993	-		MPMX19_01186	0.70	-2.3
1,230,102	+		MPMX19_01186	0.82	-0.4
1,230,102	+		MPMX19_01186	0.82	-0.3
1,230,102	+		MPMX19_01186	0.82	-0.7
1,230,103	-		MPMX19_01186	0.82	-1.0
1,230,103	-		MPMX19_01186	0.82	-1.4
1,230,103	-		MPMX19_01186	0.82	-0.3
1,230,103	-		MPMX19_01186	0.82	-0.1
1,230,103	-		MPMX19_01186	0.82	+0.6
1,230,103	-		MPMX19_01186	0.82	-0.2
1,230,103	-		MPMX19_01186	0.82	-1.1
1,230,169	+		MPMX19_01186	0.89	+0.1
1,230,170	-		MPMX19_01186	0.89	-0.0
1,230,170	-		MPMX19_01186	0.89	+0.4
1,230,222	-				-1.6