Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01150

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,187,571	+		MPMX19_01149	0.80	-0.8
1,187,571	+		MPMX19_01149	0.80	-0.0
1,187,572	-		MPMX19_01149	0.80	-1.3
1,187,819	+				+1.0
1,187,819	+				-1.3
1,187,819	+				-1.0
1,187,819	+				-0.3
1,187,819	+				-0.3
1,187,819	+				+3.0
1,187,819	+				-1.5
1,187,819	+				-0.2
1,187,819	+				-0.8
1,187,820	-				+0.3
1,187,820	-				-0.6
1,187,820	-				-2.3
1,187,820	-				-1.0
1,187,820	-				+0.4
1,187,820	-				-0.0
1,187,820	-				+1.0
1,187,820	-				-0.7
1,187,820	-				-1.5
1,188,072	+				+0.3
1,188,072	+				-0.6
1,188,072	+				-0.6
1,188,072	+				-1.7
1,188,072	+				-1.1
1,188,072	+				-1.3
1,188,072	+				-0.2
1,188,072	+				+0.7
1,188,072	+				-2.0
1,188,072	+				+0.6
1,188,072	+				-0.2
1,188,073	-				-0.6
1,188,073	-				-0.0
1,188,073	-				-1.6
1,188,073	-				-0.3
1,188,073	-				-1.6
1,188,073	-				-0.4
1,188,073	-				-0.1
1,188,073	-				+1.4
1,188,073	-				+1.6
1,188,073	-				+0.1
1,188,073	-				-1.3
1,188,073	-				+0.3
1,188,073	-				-0.2
1,188,074	+				-0.7
1,188,074	+				-0.8
1,188,074	+				-1.6
1,188,074	+				+0.2
1,188,074	+				-1.0
1,188,074	+				+1.0
1,188,074	+				+0.6
1,188,074	+				-1.2
1,188,074	+				+0.8
1,188,074	+				-1.4
1,188,074	+				-1.6
1,188,074	+				-0.6
1,188,074	+				-1.9
1,188,074	+				-1.5
1,188,074	+				-0.3
1,188,074	+				-0.1
1,188,074	+				-0.3
1,188,074	+				-1.3
1,188,074	+				+0.8
1,188,074	+				-0.3
1,188,074	+				+0.2
1,188,074	+				-0.5
1,188,074	+				-0.2
1,188,074	+				+0.3
1,188,074	+				-0.3
1,188,074	+				-0.8
1,188,074	+				+0.4
1,188,074	+				-1.2
1,188,074	+				-0.6
1,188,074	+				-0.7
1,188,074	+				-0.7
1,188,074	+				+0.6
1,188,074	+				+0.4
1,188,074	+				-1.8
1,188,074	+				-0.5
1,188,075	-				+0.8
1,188,075	-				+1.0
1,188,075	-				-0.1
1,188,075	-				-0.2
1,188,075	-				-0.8
1,188,075	-				-0.1
1,188,075	-				+0.2
1,188,075	-				-1.5
1,188,075	-				+0.4
1,188,075	-				+0.4
1,188,075	-				-0.0
1,188,075	-				+1.0
1,188,075	-				-0.7
1,188,075	-				+0.4
1,188,075	-				-0.3
1,188,075	-				-1.3
1,188,075	-				-1.2
1,188,075	-				+0.4
1,188,075	-				-1.8
1,188,075	-				-2.0
1,188,075	-				+1.2
1,188,075	-				-0.0
1,188,075	-				+1.4
1,188,075	-				-0.4
1,188,075	-				-0.5
1,188,075	-				-0.2
1,188,075	-				-1.6
1,188,075	-				-1.2
1,188,075	-				-1.2
1,188,075	-				-0.3
1,188,075	-				+0.4
1,188,075	-				+0.7
1,188,075	-				+0.7
1,188,075	-				-2.4
1,188,075	-				+0.1
1,188,075	-				-1.2
1,188,075	-				-0.0
1,188,092	+				-1.2
1,188,092	+				+1.0
1,188,092	+				-0.6
1,188,093	-				+0.4
1,188,093	-				-1.3
1,188,099	+				-0.6
1,188,099	+				+0.2
1,188,100	-				-0.2
1,188,100	-				+1.1
1,188,100	-				-0.3
1,188,100	-				-0.0
1,188,100	-				-1.2
1,188,107	-				-0.6
1,188,131	+				-2.1
1,188,131	+				-1.6
1,188,131	+				-0.0
1,188,132	-				-0.0
1,188,132	-				+1.1
1,188,326	+		MPMX19_01150	0.23	+1.0
1,188,326	+		MPMX19_01150	0.23	-0.8
1,188,326	+		MPMX19_01150	0.23	-1.2
1,188,326	+		MPMX19_01150	0.23	-1.3
1,188,326	+		MPMX19_01150	0.23	+1.5
1,188,327	-		MPMX19_01150	0.23	-0.6
1,188,327	-		MPMX19_01150	0.23	-0.8
1,188,327	-		MPMX19_01150	0.23	-0.6
1,188,327	-		MPMX19_01150	0.23	+1.7
1,188,327	-		MPMX19_01150	0.23	+0.3
1,188,421	+		MPMX19_01150	0.41	+0.8
1,188,422	-		MPMX19_01150	0.41	+0.4
1,188,422	-		MPMX19_01150	0.41	-0.2
1,188,422	-		MPMX19_01150	0.41	+0.3
1,188,428	+		MPMX19_01150	0.42	-1.7
1,188,429	-		MPMX19_01150	0.42	+0.7
1,188,458	+		MPMX19_01150	0.48	+0.1
1,188,458	+		MPMX19_01150	0.48	-0.7
1,188,458	+		MPMX19_01150	0.48	+0.7
1,188,458	+		MPMX19_01150	0.48	+0.8
1,188,458	+		MPMX19_01150	0.48	-0.9
1,188,458	+		MPMX19_01150	0.48	+2.0
1,188,458	+		MPMX19_01150	0.48	+1.4
1,188,458	+		MPMX19_01150	0.48	-0.8
1,188,458	+		MPMX19_01150	0.48	-0.9
1,188,458	+		MPMX19_01150	0.48	+1.0
1,188,458	+		MPMX19_01150	0.48	+0.8
1,188,458	+		MPMX19_01150	0.48	+1.0
1,188,458	+		MPMX19_01150	0.48	+1.3
1,188,459	-		MPMX19_01150	0.48	-2.7
1,188,459	-		MPMX19_01150	0.48	-0.2
1,188,459	-		MPMX19_01150	0.48	-0.9
1,188,459	-		MPMX19_01150	0.48	-2.0
1,188,459	-		MPMX19_01150	0.48	-1.2
1,188,459	-		MPMX19_01150	0.48	+1.0
1,188,459	-		MPMX19_01150	0.48	-1.7
1,188,459	-		MPMX19_01150	0.48	-0.4
1,188,715	+				+0.4
1,188,716	-				+1.0
1,188,716	-				-1.9
1,188,716	-				-1.7
1,188,725	+				-0.3
1,188,725	+				+0.1
1,188,725	+				-0.6
1,188,725	+				-1.5
1,188,725	+				-1.1
1,188,725	+				-2.5
1,188,726	-				-1.6
1,188,726	-				-0.8
1,188,747	+				+2.2
1,188,747	+				-1.5
1,188,747	+				-1.6
1,188,747	+				-0.2
1,188,748	-				-1.3
1,188,748	-				-1.9
1,188,748	-				-0.4
1,188,748	-				+0.8
1,188,748	-				-1.3
1,188,748	-				+0.7
1,188,748	-				+1.7
1,188,766	+				-2.0
1,188,766	+				-0.3
1,188,766	+				-0.7
1,188,766	+				-0.2
1,188,766	+				-0.5
1,188,766	+				-0.8
1,188,766	+				-0.3
1,188,766	+				-0.8
1,188,766	+				-1.5
1,188,767	-				-0.6
1,188,767	-				-0.2
1,188,767	-				-0.1
1,188,767	-				+0.7
1,188,767	-				-1.8
1,188,767	-				-0.0
1,188,768	-				-1.0
1,189,027	+		MPMX19_01151	0.12	-0.3
1,189,028	-		MPMX19_01151	0.12	+0.2
1,189,028	-		MPMX19_01151	0.12	-0.1
1,189,363	+		MPMX19_01151	0.33	-0.7
1,189,363	+		MPMX19_01151	0.33	-0.0
1,189,363	+		MPMX19_01151	0.33	+0.0
1,189,363	+		MPMX19_01151	0.33	-0.3
1,189,363	+		MPMX19_01151	0.33	-0.4
1,189,363	+		MPMX19_01151	0.33	-0.6
1,189,363	+		MPMX19_01151	0.33	-0.9
1,189,363	+		MPMX19_01151	0.33	-0.5
1,189,363	+		MPMX19_01151	0.33	-0.3
1,189,363	+		MPMX19_01151	0.33	-1.5
1,189,364	-		MPMX19_01151	0.33	+0.2
1,189,364	-		MPMX19_01151	0.33	+1.3
1,189,364	-		MPMX19_01151	0.33	-1.4
1,189,364	-		MPMX19_01151	0.33	-0.5
1,189,591	+		MPMX19_01151	0.47	-1.7
1,189,591	+		MPMX19_01151	0.47	+0.6
1,189,592	-		MPMX19_01151	0.47	-0.4
1,189,592	-		MPMX19_01151	0.47	-0.9
1,189,592	-		MPMX19_01151	0.47	+2.0
1,189,592	-		MPMX19_01151	0.47	+0.7
1,189,599	+		MPMX19_01151	0.48	-0.8
1,189,600	-		MPMX19_01151	0.48	-0.4
1,189,600	-		MPMX19_01151	0.48	+0.1