Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01092 and MPMX19_01093 are separated by 231 nucleotides MPMX19_01093 and MPMX19_01094 are separated by 10 nucleotides MPMX19_01094 and MPMX19_01095 are separated by 2 nucleotides
MPMX19_01092: MPMX19_01092 - Ribulose-phosphate 3-epimerase, at 1,128,181 to 1,128,834
_01092
MPMX19_01093: MPMX19_01093 - Molybdate-binding protein ModA, at 1,129,066 to 1,129,875
_01093
MPMX19_01094: MPMX19_01094 - Molybdenum transport system permease protein ModB, at 1,129,886 to 1,130,581
_01094
MPMX19_01095: MPMX19_01095 - Sulfate/thiosulfate import ATP-binding protein CysA, at 1,130,584 to 1,131,705
_01095
Position (kb)
1129
1130 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1128.086 kb on + strand at 1128.086 kb on + strand at 1128.087 kb on - strand at 1128.087 kb on - strand at 1128.087 kb on - strand at 1128.177 kb on + strand at 1128.177 kb on + strand at 1128.177 kb on + strand at 1128.177 kb on + strand at 1128.177 kb on + strand at 1128.177 kb on + strand at 1128.177 kb on + strand at 1128.178 kb on - strand at 1128.178 kb on - strand at 1128.178 kb on - strand at 1128.178 kb on - strand at 1128.178 kb on - strand at 1128.891 kb on - strand at 1128.891 kb on - strand at 1128.891 kb on - strand at 1128.900 kb on + strand at 1128.900 kb on + strand at 1128.900 kb on + strand at 1128.900 kb on + strand at 1128.901 kb on - strand at 1128.901 kb on - strand at 1128.937 kb on - strand at 1129.020 kb on - strand at 1129.034 kb on - strand at 1129.203 kb on + strand, within MPMX19_01093 at 1129.203 kb on + strand, within MPMX19_01093 at 1129.203 kb on + strand, within MPMX19_01093 at 1129.203 kb on + strand, within MPMX19_01093 at 1129.204 kb on - strand, within MPMX19_01093 at 1129.204 kb on - strand, within MPMX19_01093 at 1129.204 kb on - strand, within MPMX19_01093 at 1129.204 kb on - strand, within MPMX19_01093 at 1129.204 kb on - strand, within MPMX19_01093 at 1129.204 kb on - strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.357 kb on + strand, within MPMX19_01093 at 1129.358 kb on - strand, within MPMX19_01093 at 1129.358 kb on - strand, within MPMX19_01093 at 1129.358 kb on - strand, within MPMX19_01093 at 1129.358 kb on - strand, within MPMX19_01093 at 1129.358 kb on - strand, within MPMX19_01093 at 1129.358 kb on - strand, within MPMX19_01093 at 1129.543 kb on + strand, within MPMX19_01093 at 1129.543 kb on + strand, within MPMX19_01093 at 1129.543 kb on + strand, within MPMX19_01093 at 1129.544 kb on - strand, within MPMX19_01093 at 1129.544 kb on - strand, within MPMX19_01093 at 1129.544 kb on - strand, within MPMX19_01093 at 1129.544 kb on - strand, within MPMX19_01093 at 1129.669 kb on + strand, within MPMX19_01093 at 1129.669 kb on + strand, within MPMX19_01093 at 1129.670 kb on - strand, within MPMX19_01093 at 1129.670 kb on - strand, within MPMX19_01093 at 1129.670 kb on - strand, within MPMX19_01093 at 1129.670 kb on - strand, within MPMX19_01093 at 1129.732 kb on + strand, within MPMX19_01093 at 1129.732 kb on + strand, within MPMX19_01093 at 1129.732 kb on + strand, within MPMX19_01093 at 1129.732 kb on + strand, within MPMX19_01093 at 1129.732 kb on + strand, within MPMX19_01093 at 1129.733 kb on - strand, within MPMX19_01093 at 1129.733 kb on - strand, within MPMX19_01093 at 1129.747 kb on + strand, within MPMX19_01093 at 1129.747 kb on + strand, within MPMX19_01093 at 1129.748 kb on - strand, within MPMX19_01093 at 1129.748 kb on - strand, within MPMX19_01093 at 1129.804 kb on + strand at 1129.804 kb on + strand at 1129.804 kb on + strand at 1129.804 kb on + strand at 1129.804 kb on + strand at 1129.804 kb on + strand at 1129.804 kb on + strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.805 kb on - strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.873 kb on + strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1129.874 kb on - strand at 1130.003 kb on + strand, within MPMX19_01094 at 1130.003 kb on + strand, within MPMX19_01094 at 1130.004 kb on - strand, within MPMX19_01094 at 1130.078 kb on + strand, within MPMX19_01094 at 1130.078 kb on + strand, within MPMX19_01094 at 1130.078 kb on + strand, within MPMX19_01094 at 1130.078 kb on + strand, within MPMX19_01094 at 1130.078 kb on + strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.079 kb on - strand, within MPMX19_01094 at 1130.080 kb on + strand, within MPMX19_01094 at 1130.080 kb on + strand, within MPMX19_01094 at 1130.080 kb on + strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.081 kb on - strand, within MPMX19_01094 at 1130.129 kb on + strand, within MPMX19_01094 at 1130.129 kb on + strand, within MPMX19_01094 at 1130.129 kb on + strand, within MPMX19_01094 at 1130.129 kb on + strand, within MPMX19_01094 at 1130.129 kb on + strand, within MPMX19_01094 at 1130.130 kb on - strand, within MPMX19_01094 at 1130.130 kb on - strand, within MPMX19_01094 at 1130.130 kb on - strand, within MPMX19_01094 at 1130.130 kb on - strand, within MPMX19_01094 at 1130.130 kb on - strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.444 kb on + strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.445 kb on - strand, within MPMX19_01094 at 1130.746 kb on - strand, within MPMX19_01095 at 1130.746 kb on - strand, within MPMX19_01095 at 1130.760 kb on + strand, within MPMX19_01095 at 1130.821 kb on + strand, within MPMX19_01095 at 1130.821 kb on + strand, within MPMX19_01095 at 1130.821 kb on + strand, within MPMX19_01095 at 1130.821 kb on + strand, within MPMX19_01095 at 1130.821 kb on + strand, within MPMX19_01095 at 1130.821 kb on + strand, within MPMX19_01095 at 1130.821 kb on + strand, within MPMX19_01095 at 1130.822 kb on - strand, within MPMX19_01095 at 1130.822 kb on - strand, within MPMX19_01095 at 1130.822 kb on - strand, within MPMX19_01095
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 1,128,086 + -1.2 1,128,086 + -0.8 1,128,087 - -1.1 1,128,087 - -3.1 1,128,087 - -1.4 1,128,177 + -0.5 1,128,177 + -1.7 1,128,177 + -1.2 1,128,177 + +0.6 1,128,177 + +0.0 1,128,177 + -0.5 1,128,177 + -0.4 1,128,178 - +0.2 1,128,178 - -0.5 1,128,178 - +0.4 1,128,178 - -2.1 1,128,178 - -0.6 1,128,891 - -0.5 1,128,891 - -0.7 1,128,891 - -0.4 1,128,900 + -0.3 1,128,900 + -1.3 1,128,900 + +0.6 1,128,900 + -0.3 1,128,901 - -0.3 1,128,901 - +0.0 1,128,937 - -1.1 1,129,020 - -0.0 1,129,034 - -0.3 1,129,203 + MPMX19_01093 0.17 +1.4 1,129,203 + MPMX19_01093 0.17 -0.8 1,129,203 + MPMX19_01093 0.17 -1.8 1,129,203 + MPMX19_01093 0.17 -0.8 1,129,204 - MPMX19_01093 0.17 -0.3 1,129,204 - MPMX19_01093 0.17 -1.2 1,129,204 - MPMX19_01093 0.17 -1.8 1,129,204 - MPMX19_01093 0.17 +1.4 1,129,204 - MPMX19_01093 0.17 +0.4 1,129,204 - MPMX19_01093 0.17 -0.0 1,129,357 + MPMX19_01093 0.36 -1.3 1,129,357 + MPMX19_01093 0.36 -0.7 1,129,357 + MPMX19_01093 0.36 -0.7 1,129,357 + MPMX19_01093 0.36 +0.3 1,129,357 + MPMX19_01093 0.36 +0.8 1,129,357 + MPMX19_01093 0.36 -0.2 1,129,357 + MPMX19_01093 0.36 -0.4 1,129,357 + MPMX19_01093 0.36 -1.0 1,129,357 + MPMX19_01093 0.36 +1.2 1,129,358 - MPMX19_01093 0.36 -1.0 1,129,358 - MPMX19_01093 0.36 -1.7 1,129,358 - MPMX19_01093 0.36 +0.1 1,129,358 - MPMX19_01093 0.36 +0.3 1,129,358 - MPMX19_01093 0.36 -1.6 1,129,358 - MPMX19_01093 0.36 -0.7 1,129,543 + MPMX19_01093 0.59 -1.0 1,129,543 + MPMX19_01093 0.59 -1.8 1,129,543 + MPMX19_01093 0.59 +1.0 1,129,544 - MPMX19_01093 0.59 -1.0 1,129,544 - MPMX19_01093 0.59 -1.3 1,129,544 - MPMX19_01093 0.59 -0.0 1,129,544 - MPMX19_01093 0.59 -1.7 1,129,669 + MPMX19_01093 0.74 -0.6 1,129,669 + MPMX19_01093 0.74 -0.3 1,129,670 - MPMX19_01093 0.75 +0.2 1,129,670 - MPMX19_01093 0.75 -1.3 1,129,670 - MPMX19_01093 0.75 +0.7 1,129,670 - MPMX19_01093 0.75 -1.2 1,129,732 + MPMX19_01093 0.82 -0.3 1,129,732 + MPMX19_01093 0.82 -0.7 1,129,732 + MPMX19_01093 0.82 -0.2 1,129,732 + MPMX19_01093 0.82 +0.2 1,129,732 + MPMX19_01093 0.82 -1.9 1,129,733 - MPMX19_01093 0.82 -0.2 1,129,733 - MPMX19_01093 0.82 +0.5 1,129,747 + MPMX19_01093 0.84 -0.6 1,129,747 + MPMX19_01093 0.84 -2.5 1,129,748 - MPMX19_01093 0.84 -0.6 1,129,748 - MPMX19_01093 0.84 -1.3 1,129,804 + -0.8 1,129,804 + +0.6 1,129,804 + -1.1 1,129,804 + -0.2 1,129,804 + +0.1 1,129,804 + -0.0 1,129,804 + -0.0 1,129,805 - -1.5 1,129,805 - -0.6 1,129,805 - -1.1 1,129,805 - -0.0 1,129,805 - -1.6 1,129,805 - -0.8 1,129,805 - -0.6 1,129,805 - -0.7 1,129,805 - -2.0 1,129,873 + +0.2 1,129,873 + -0.5 1,129,873 + +0.6 1,129,873 + -1.3 1,129,873 + -2.3 1,129,873 + -0.8 1,129,873 + -2.5 1,129,873 + -0.6 1,129,873 + -0.7 1,129,873 + +1.6 1,129,873 + +0.9 1,129,873 + -0.3 1,129,873 + -1.6 1,129,873 + +0.4 1,129,873 + -1.0 1,129,874 - -0.2 1,129,874 - -0.8 1,129,874 - -0.2 1,129,874 - -0.7 1,129,874 - -0.2 1,129,874 - -1.3 1,129,874 - +0.8 1,129,874 - -1.6 1,129,874 - -1.6 1,129,874 - +0.7 1,129,874 - +0.3 1,129,874 - -0.3 1,130,003 + MPMX19_01094 0.17 -1.4 1,130,003 + MPMX19_01094 0.17 -0.8 1,130,004 - MPMX19_01094 0.17 +0.7 1,130,078 + MPMX19_01094 0.28 +0.2 1,130,078 + MPMX19_01094 0.28 -0.1 1,130,078 + MPMX19_01094 0.28 -0.7 1,130,078 + MPMX19_01094 0.28 -0.6 1,130,078 + MPMX19_01094 0.28 -0.6 1,130,079 - MPMX19_01094 0.28 -0.2 1,130,079 - MPMX19_01094 0.28 -1.1 1,130,079 - MPMX19_01094 0.28 -0.6 1,130,079 - MPMX19_01094 0.28 +0.7 1,130,079 - MPMX19_01094 0.28 -1.3 1,130,079 - MPMX19_01094 0.28 -2.1 1,130,079 - MPMX19_01094 0.28 -0.8 1,130,079 - MPMX19_01094 0.28 +2.0 1,130,079 - MPMX19_01094 0.28 -0.8 1,130,080 + MPMX19_01094 0.28 +1.2 1,130,080 + MPMX19_01094 0.28 -0.6 1,130,080 + MPMX19_01094 0.28 -0.7 1,130,081 - MPMX19_01094 0.28 +0.8 1,130,081 - MPMX19_01094 0.28 -0.6 1,130,081 - MPMX19_01094 0.28 +1.5 1,130,081 - MPMX19_01094 0.28 -0.4 1,130,081 - MPMX19_01094 0.28 -1.3 1,130,081 - MPMX19_01094 0.28 -1.6 1,130,081 - MPMX19_01094 0.28 +1.3 1,130,081 - MPMX19_01094 0.28 +0.2 1,130,081 - MPMX19_01094 0.28 +1.4 1,130,081 - MPMX19_01094 0.28 -1.6 1,130,129 + MPMX19_01094 0.35 -0.7 1,130,129 + MPMX19_01094 0.35 -0.6 1,130,129 + MPMX19_01094 0.35 -0.0 1,130,129 + MPMX19_01094 0.35 +2.3 1,130,129 + MPMX19_01094 0.35 -1.3 1,130,130 - MPMX19_01094 0.35 -0.5 1,130,130 - MPMX19_01094 0.35 -1.6 1,130,130 - MPMX19_01094 0.35 -1.6 1,130,130 - MPMX19_01094 0.35 -1.3 1,130,130 - MPMX19_01094 0.35 -0.2 1,130,444 + MPMX19_01094 0.80 -0.3 1,130,444 + MPMX19_01094 0.80 -0.0 1,130,444 + MPMX19_01094 0.80 -0.0 1,130,444 + MPMX19_01094 0.80 -0.2 1,130,444 + MPMX19_01094 0.80 -1.0 1,130,444 + MPMX19_01094 0.80 +0.8 1,130,444 + MPMX19_01094 0.80 -0.2 1,130,444 + MPMX19_01094 0.80 +0.8 1,130,444 + MPMX19_01094 0.80 -1.1 1,130,444 + MPMX19_01094 0.80 -0.8 1,130,444 + MPMX19_01094 0.80 -0.7 1,130,445 - MPMX19_01094 0.80 -1.0 1,130,445 - MPMX19_01094 0.80 +1.1 1,130,445 - MPMX19_01094 0.80 +0.8 1,130,445 - MPMX19_01094 0.80 -1.3 1,130,445 - MPMX19_01094 0.80 -1.6 1,130,445 - MPMX19_01094 0.80 -1.5 1,130,445 - MPMX19_01094 0.80 +0.4 1,130,445 - MPMX19_01094 0.80 -0.1 1,130,746 - MPMX19_01095 0.14 +0.2 1,130,746 - MPMX19_01095 0.14 -2.1 1,130,760 + MPMX19_01095 0.16 -1.5 1,130,821 + MPMX19_01095 0.21 -1.0 1,130,821 + MPMX19_01095 0.21 -0.8 1,130,821 + MPMX19_01095 0.21 -0.2 1,130,821 + MPMX19_01095 0.21 +0.6 1,130,821 + MPMX19_01095 0.21 +0.3 1,130,821 + MPMX19_01095 0.21 -2.5 1,130,821 + MPMX19_01095 0.21 -0.5 1,130,822 - MPMX19_01095 0.21 -1.3 1,130,822 - MPMX19_01095 0.21 -1.4 1,130,822 - MPMX19_01095 0.21 +0.7
Or see this region's nucleotide sequence