Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01054

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,094,212	-		MPMX19_01053	0.35	+0.8
1,094,212	-		MPMX19_01053	0.35	+0.3
1,094,212	-		MPMX19_01053	0.35	-1.2
1,094,212	-		MPMX19_01053	0.35	-1.0
1,094,212	-		MPMX19_01053	0.35	+0.4
1,094,212	-		MPMX19_01053	0.35	-1.7
1,094,212	-		MPMX19_01053	0.35	-0.5
1,094,212	-		MPMX19_01053	0.35	-0.5
1,094,212	-		MPMX19_01053	0.35	-1.6
1,094,254	-		MPMX19_01053	0.39	+1.0
1,094,254	-		MPMX19_01053	0.39	-1.3
1,094,254	-		MPMX19_01053	0.39	-1.8
1,094,254	-		MPMX19_01053	0.39	-0.0
1,094,254	-		MPMX19_01053	0.39	-1.2
1,094,254	-		MPMX19_01053	0.39	-0.0
1,094,530	-		MPMX19_01053	0.60	+0.4
1,094,665	-		MPMX19_01053	0.70	-0.5
1,095,258	-		MPMX19_01054	0.21	-0.5
1,095,258	-		MPMX19_01054	0.21	-0.2
1,095,258	-		MPMX19_01054	0.21	-1.9
1,095,270	-		MPMX19_01054	0.23	-0.6
1,095,270	-		MPMX19_01054	0.23	+0.7
1,095,270	-		MPMX19_01054	0.23	-0.8
1,095,270	-		MPMX19_01054	0.23	-0.5
1,095,270	-		MPMX19_01054	0.23	-0.2
1,095,270	-		MPMX19_01054	0.23	-1.8
1,095,276	-		MPMX19_01054	0.23	-0.0
1,095,276	-		MPMX19_01054	0.23	+1.4
1,095,276	-		MPMX19_01054	0.23	-0.6
1,095,276	-		MPMX19_01054	0.23	-0.0
1,095,282	-		MPMX19_01054	0.24	-1.0
1,095,282	-		MPMX19_01054	0.24	-0.6
1,095,282	-		MPMX19_01054	0.24	+0.2
1,095,282	-		MPMX19_01054	0.24	-1.0
1,095,282	-		MPMX19_01054	0.24	-0.0
1,095,282	-		MPMX19_01054	0.24	-0.0
1,095,282	-		MPMX19_01054	0.24	-0.8
1,095,282	-		MPMX19_01054	0.24	-0.5
1,095,282	-		MPMX19_01054	0.24	-0.8
1,095,282	-		MPMX19_01054	0.24	-2.0
1,095,282	-		MPMX19_01054	0.24	-0.0
1,095,303	-		MPMX19_01054	0.26	-0.0
1,095,303	-		MPMX19_01054	0.26	-0.9
1,095,303	-		MPMX19_01054	0.26	-0.6
1,095,303	-		MPMX19_01054	0.26	-0.8
1,095,303	-		MPMX19_01054	0.26	-1.6
1,095,303	-		MPMX19_01054	0.26	-1.3
1,095,915	-		MPMX19_01054	0.89	+0.2
1,095,915	-		MPMX19_01054	0.89	+0.8
1,095,915	-		MPMX19_01054	0.89	+1.2
1,095,915	-		MPMX19_01054	0.89	-0.2
1,095,915	-		MPMX19_01054	0.89	-1.8
1,095,915	-		MPMX19_01054	0.89	-1.3
1,095,915	-		MPMX19_01054	0.89	-1.9
1,095,915	-		MPMX19_01054	0.89	-0.2
1,096,035	-				-1.5
1,096,035	-				-1.5
1,096,035	-				-1.6
1,096,035	-				-0.3
1,096,035	-				-0.8
1,096,037	-				-1.0
1,096,037	-				-0.0
1,096,037	-				-2.8
1,096,037	-				-1.5
1,096,037	-				-1.8
1,096,037	-				+0.3
1,096,037	-				-0.9
1,096,037	-				-1.6
1,096,037	-				-0.8
1,096,037	-				-0.0
1,096,037	-				-0.5
1,096,037	-				-0.8
1,096,037	-				-0.6
1,096,037	-				-0.2
1,096,037	-				-2.4
1,096,037	-				-0.1
1,096,037	-				+0.7
1,096,037	-				-0.1
1,096,037	-				-0.8
1,096,037	-				-0.0
1,096,037	-				+0.4
1,096,037	-				+0.8
1,096,037	-				-0.3
1,096,037	-				-0.2
1,096,051	-				+1.0
1,096,115	+				-0.3
1,096,115	+				-0.1
1,096,115	+				-1.0
1,096,115	+				-0.0
1,096,115	+				-0.6
1,096,115	+				-0.0
1,096,115	+				-0.4
1,096,115	+				-1.9
1,096,115	+				-1.0
1,096,115	+				+0.6
1,096,116	-				-0.6
1,096,116	-				-1.5
1,096,116	-				-0.6
1,096,116	-				-0.6
1,096,116	-				+0.8
1,096,116	-				-0.4
1,096,116	-				-0.2
1,096,116	-				+0.8
1,096,116	-				-0.0
1,096,116	-				-0.2
1,096,116	-				-0.0
1,096,116	-				+0.0
1,096,116	-				-1.0
1,096,145	+				-0.0
1,096,145	+				-1.2
1,096,145	+				+1.6
1,096,145	+				-0.0
1,096,145	+				-0.9
1,096,145	+				-0.3
1,096,145	+				+0.1
1,096,146	-				-0.0
1,096,146	-				+1.0
1,096,146	-				-1.2
1,096,146	-				-0.6
1,096,146	-				-0.3
1,096,146	-				+0.4
1,096,146	-				+0.4
1,096,166	+				-1.2
1,096,166	+				-0.1
1,096,166	+				-0.0
1,096,166	+				+0.8
1,096,166	+				+0.2
1,096,166	+				+0.5
1,096,166	+				-1.3
1,096,166	+				-1.0
1,096,166	+				-1.0
1,096,166	+				+0.6
1,096,166	+				-0.2
1,096,166	+				+1.0
1,096,166	+				+0.4
1,096,166	+				-0.8
1,096,166	+				-1.2
1,096,166	+				-1.6
1,096,166	+				-0.9
1,096,166	+				-0.7
1,096,166	+				-1.7
1,096,166	+				-1.8
1,096,167	-				-1.0
1,096,167	-				-2.3
1,096,167	-				-1.2
1,096,167	-				-0.2
1,096,167	-				-0.2
1,096,167	-				+2.0
1,096,167	-				-1.2
1,096,167	-				+1.0
1,096,167	-				-0.3
1,096,167	-				-0.1
1,096,167	-				-1.0
1,096,167	-				+0.4
1,096,167	-				-1.9
1,096,167	-				-0.2
1,096,167	-				-0.5
1,096,167	-				-0.8
1,096,167	-				-0.2
1,096,167	-				-0.0
1,096,167	-				-1.1
1,096,167	-				+0.3
1,096,169	+				-0.6
1,096,169	+				+0.7
1,096,169	+				-0.7
1,096,169	+				-1.2
1,096,169	+				-2.6
1,096,169	+				-1.0
1,096,169	+				-0.2
1,096,169	+				-0.8
1,096,169	+				-2.3
1,096,169	+				-0.0
1,096,169	+				-0.6
1,096,169	+				-1.3
1,096,169	+				-1.2
1,096,169	+				-1.0
1,096,169	+				+0.1
1,096,169	+				-0.3
1,096,169	+				-0.1
1,096,169	+				+0.6
1,096,169	+				+1.6
1,096,169	+				-0.6
1,096,170	-		MPMX19_01055	0.10	-2.3
1,096,170	-		MPMX19_01055	0.10	-0.5
1,096,170	-		MPMX19_01055	0.10	+1.4
1,096,170	-		MPMX19_01055	0.10	-0.3
1,096,170	-		MPMX19_01055	0.10	+0.2
1,096,170	-		MPMX19_01055	0.10	+1.5
1,096,170	-		MPMX19_01055	0.10	+0.4
1,096,170	-		MPMX19_01055	0.10	+0.1
1,096,170	-		MPMX19_01055	0.10	-0.6
1,096,261	+		MPMX19_01055	0.20	-1.5
1,096,261	+		MPMX19_01055	0.20	-0.0
1,096,261	+		MPMX19_01055	0.20	-0.9
1,096,261	+		MPMX19_01055	0.20	-0.5
1,096,261	+		MPMX19_01055	0.20	+0.4
1,096,261	+		MPMX19_01055	0.20	-0.0
1,096,261	+		MPMX19_01055	0.20	+0.4
1,096,261	+		MPMX19_01055	0.20	+1.0
1,096,261	+		MPMX19_01055	0.20	-1.0
1,096,261	+		MPMX19_01055	0.20	-0.9
1,096,261	+		MPMX19_01055	0.20	+0.2
1,096,261	+		MPMX19_01055	0.20	-1.0
1,096,261	+		MPMX19_01055	0.20	-1.3
1,096,261	+		MPMX19_01055	0.20	-0.5
1,096,261	+		MPMX19_01055	0.20	+0.4
1,096,261	+		MPMX19_01055	0.20	-0.2
1,096,261	+		MPMX19_01055	0.20	+0.2
1,096,261	+		MPMX19_01055	0.20	-1.1
1,096,261	+		MPMX19_01055	0.20	-0.0
1,096,262	-		MPMX19_01055	0.20	-1.5
1,096,262	-		MPMX19_01055	0.20	-0.9
1,096,262	-		MPMX19_01055	0.20	-0.6
1,096,262	-		MPMX19_01055	0.20	+2.6
1,096,262	-		MPMX19_01055	0.20	-0.5
1,096,262	-		MPMX19_01055	0.20	-1.4
1,096,262	-		MPMX19_01055	0.20	-1.2
1,096,262	-		MPMX19_01055	0.20	+0.6
1,096,262	-		MPMX19_01055	0.20	-0.0
1,096,262	-		MPMX19_01055	0.20	-0.1
1,096,262	-		MPMX19_01055	0.20	-0.8
1,096,262	-		MPMX19_01055	0.20	-0.3
1,096,262	-		MPMX19_01055	0.20	+0.7
1,096,262	-		MPMX19_01055	0.20	+0.4
1,096,262	-		MPMX19_01055	0.20	-0.8
1,096,262	-		MPMX19_01055	0.20	-1.0
1,096,262	-		MPMX19_01055	0.20	-0.6
1,096,262	-		MPMX19_01055	0.20	-0.6
1,096,262	-		MPMX19_01055	0.20	-0.6
1,096,262	-		MPMX19_01055	0.20	+0.7
1,096,262	-		MPMX19_01055	0.20	-1.5
1,096,262	-		MPMX19_01055	0.20	+1.3
1,096,382	+		MPMX19_01055	0.34	-1.3
1,096,382	+		MPMX19_01055	0.34	+0.7
1,096,382	+		MPMX19_01055	0.34	+1.3
1,096,382	+		MPMX19_01055	0.34	+0.2
1,096,382	+		MPMX19_01055	0.34	-1.3
1,096,382	+		MPMX19_01055	0.34	+1.4
1,096,382	+		MPMX19_01055	0.34	-0.8
1,096,382	+		MPMX19_01055	0.34	-0.6
1,096,382	+		MPMX19_01055	0.34	+0.4
1,096,382	+		MPMX19_01055	0.34	-0.7
1,096,382	+		MPMX19_01055	0.34	-1.7
1,096,382	+		MPMX19_01055	0.34	-0.2
1,096,382	+		MPMX19_01055	0.34	-0.7
1,096,382	+		MPMX19_01055	0.34	-1.0
1,096,382	+		MPMX19_01055	0.34	-0.6
1,096,382	+		MPMX19_01055	0.34	-2.1
1,096,383	-		MPMX19_01055	0.34	-1.1
1,096,383	-		MPMX19_01055	0.34	+2.0
1,096,383	-		MPMX19_01055	0.34	-1.7
1,096,383	-		MPMX19_01055	0.34	-1.4
1,096,383	-		MPMX19_01055	0.34	-2.2
1,096,383	-		MPMX19_01055	0.34	-0.5
1,096,383	-		MPMX19_01055	0.34	-0.7
1,096,383	-		MPMX19_01055	0.34	-0.3
1,096,425	+		MPMX19_01055	0.39	+1.0
1,096,425	+		MPMX19_01055	0.39	-1.5
1,096,426	-		MPMX19_01055	0.39	-1.0
1,096,447	+		MPMX19_01055	0.41	-0.0
1,096,448	-		MPMX19_01055	0.41	-2.0
1,096,602	+		MPMX19_01055	0.59	+0.2
1,096,763	+		MPMX19_01055	0.77	+0.2
1,096,763	+		MPMX19_01055	0.77	+0.2
1,096,763	+		MPMX19_01055	0.77	+0.7
1,096,763	+		MPMX19_01055	0.77	+1.3
1,096,763	+		MPMX19_01055	0.77	-2.2
1,096,763	+		MPMX19_01055	0.77	+0.2
1,096,763	+		MPMX19_01055	0.77	-0.8
1,096,763	+		MPMX19_01055	0.77	-0.7
1,096,763	+		MPMX19_01055	0.77	-0.0
1,096,763	+		MPMX19_01055	0.77	-0.1
1,096,763	+		MPMX19_01055	0.77	-2.0
1,096,763	+		MPMX19_01055	0.77	+0.4
1,096,764	-		MPMX19_01055	0.77	+1.3
1,096,764	-		MPMX19_01055	0.77	+0.4
1,096,764	-		MPMX19_01055	0.77	+1.2
1,096,764	-		MPMX19_01055	0.77	+0.4
1,096,764	-		MPMX19_01055	0.77	+1.0
1,096,764	-		MPMX19_01055	0.77	-0.2
1,096,764	-		MPMX19_01055	0.77	+0.6
1,097,010	+				-1.0